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Items: 18

1.

Force-Dependent Facilitated Dissociation Can Generate Protein-DNA Catch Bonds.

Dahlke K, Zhao J, Sing CE, Banigan EJ.

Biophys J. 2019 Sep 17;117(6):1085-1100. doi: 10.1016/j.bpj.2019.07.044. Epub 2019 Aug 2.

PMID:
31427067
2.

Physicochemical mechanotransduction alters nuclear shape and mechanics via heterochromatin formation.

Stephens AD, Liu PZ, Kandula V, Chen H, Almassalha LM, Herman C, Backman V, O'Halloran T, Adam SA, Goldman RD, Banigan EJ, Marko JF.

Mol Biol Cell. 2019 Aug 1;30(17):2320-2330. doi: 10.1091/mbc.E19-05-0286.

3.

Physicochemical mechanotransduction alters nuclear shape and mechanics via heterochromatin formation.

Stephens AD, Liu PZ, Kandula V, Chen H, Almassalha LM, Herman C, Backman V, O'Halloran T, Adam SA, Goldman RD, Banigan EJ, Marko JF.

Mol Biol Cell. 2019 Jun 19:mbcE19050286T. doi: 10.1091/mbc.E19-05-0286-T. [Epub ahead of print]

PMID:
31216230
4.

Chromatin's physical properties shape the nucleus and its functions.

Stephens AD, Banigan EJ, Marko JF.

Curr Opin Cell Biol. 2019 Jun;58:76-84. doi: 10.1016/j.ceb.2019.02.006. Epub 2019 Mar 16. Review.

PMID:
30889417
5.

Separate roles for chromatin and lamins in nuclear mechanics.

Stephens AD, Banigan EJ, Marko JF.

Nucleus. 2018 Jan 1;9(1):119-124. doi: 10.1080/19491034.2017.1414118. Epub 2017 Dec 28.

6.

Chromatin histone modifications and rigidity affect nuclear morphology independent of lamins.

Stephens AD, Liu PZ, Banigan EJ, Almassalha LM, Backman V, Adam SA, Goldman RD, Marko JF.

Mol Biol Cell. 2018 Jan 15;29(2):220-233. doi: 10.1091/mbc.E17-06-0410. Epub 2017 Nov 15.

7.

Mechanics and Buckling of Biopolymeric Shells and Cell Nuclei.

Banigan EJ, Stephens AD, Marko JF.

Biophys J. 2017 Oct 17;113(8):1654-1663. doi: 10.1016/j.bpj.2017.08.034.

8.

Facilitated dissociation of transcription factors from single DNA binding sites.

Kamar RI, Banigan EJ, Erbas A, Giuntoli RD, Olvera de la Cruz M, Johnson RC, Marko JF.

Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):E3251-E3257. doi: 10.1073/pnas.1701884114. Epub 2017 Mar 31.

9.

Chromatin and lamin A determine two different mechanical response regimes of the cell nucleus.

Stephens AD, Banigan EJ, Adam SA, Goldman RD, Marko JF.

Mol Biol Cell. 2017 Jul 7;28(14):1984-1996. doi: 10.1091/mbc.E16-09-0653. Epub 2017 Jan 5.

10.

Erratum: Torque correlation length and stochastic twist dynamics of DNA [Phys. Rev. E 89, 062706 (2014)].

Banigan EJ, Marko JF.

Phys Rev E. 2016 Apr;93(4-2):049904. Epub 2016 Apr 20.

PMID:
27182590
11.

Self-propulsion and interactions of catalytic particles in a chemically active medium.

Banigan EJ, Marko JF.

Phys Rev E. 2016 Jan;93(1):012611. doi: 10.1103/PhysRevE.93.012611. Epub 2016 Jan 25.

12.

Minimal model for collective kinetochore-microtubule dynamics.

Banigan EJ, Chiou KK, Ballister ER, Mayo AM, Lampson MA, Liu AJ.

Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):12699-704. doi: 10.1073/pnas.1513512112. Epub 2015 Sep 28. Erratum in: Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):E6546.

13.

DNA-Segment-Facilitated Dissociation of Fis and NHP6A from DNA Detected via Single-Molecule Mechanical Response.

Giuntoli RD, Linzer NB, Banigan EJ, Sing CE, de la Cruz MO, Graham JS, Johnson RC, Marko JF.

J Mol Biol. 2015 Sep 25;427(19):3123-36. doi: 10.1016/j.jmb.2015.07.015. Epub 2015 Jul 26.

14.

Heterogeneous CD8+ T cell migration in the lymph node in the absence of inflammation revealed by quantitative migration analysis.

Banigan EJ, Harris TH, Christian DA, Hunter CA, Liu AJ.

PLoS Comput Biol. 2015 Feb 18;11(2):e1004058. doi: 10.1371/journal.pcbi.1004058. eCollection 2015 Feb.

15.

Torque correlation length and stochastic twist dynamics of DNA.

Banigan EJ, Marko JF.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Jun;89(6):062706. Epub 2014 Jun 13. Erratum in: Phys Rev E. 2016 Apr;93(4-2):049904.

16.

Control of actin-based motility through localized actin binding.

Banigan EJ, Lee KC, Liu AJ.

Phys Biol. 2013 Dec;10(6):066004. doi: 10.1088/1478-3975/10/6/066004. Epub 2013 Nov 14.

17.

Generalized Lévy walks and the role of chemokines in migration of effector CD8+ T cells.

Harris TH, Banigan EJ, Christian DA, Konradt C, Tait Wojno ED, Norose K, Wilson EH, John B, Weninger W, Luster AD, Liu AJ, Hunter CA.

Nature. 2012 Jun 28;486(7404):545-8. doi: 10.1038/nature11098.

18.

Filament depolymerization can explain chromosome pulling during bacterial mitosis.

Banigan EJ, Gelbart MA, Gitai Z, Wingreen NS, Liu AJ.

PLoS Comput Biol. 2011 Sep;7(9):e1002145. doi: 10.1371/journal.pcbi.1002145. Epub 2011 Sep 22.

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