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Items: 11

1.

Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines.

Guo T, Luna A, Rajapakse VN, Koh CC, Wu Z, Liu W, Sun Y, Gao H, Menden MP, Xu C, Calzone L, Martignetti L, Auwerx C, Buljan M, Banaei-Esfahani A, Ori A, Iskar M, Gillet L, Bi R, Zhang J, Zhang H, Yu C, Zhong Q, Varma S, Schmitt U, Qiu P, Zhang Q, Zhu Y, Wild PJ, Garnett MJ, Bork P, Beck M, Liu K, Saez-Rodriguez J, Elloumi F, Reinhold WC, Sander C, Pommier Y, Aebersold R.

iScience. 2019 Nov 22;21:664-680. doi: 10.1016/j.isci.2019.10.059. Epub 2019 Oct 31.

2.

Identification of genes involved in glaucoma pathogenesis using combined network analysis and empirical studies.

Moazzeni H, Mirrahimi M, Moghadam A, Banaei-Esfahani A, Yazdani S, Elahi E.

Hum Mol Genet. 2019 Sep 13. pii: ddz222. doi: 10.1093/hmg/ddz222. [Epub ahead of print]

PMID:
31518395
3.

A new class of protein biomarkers based on subcellular distribution: application to a mouse liver cancer model.

Sajic T, Ciuffa R, Lemos V, Xu P, Leone V, Li C, Williams EG, Makris G, Banaei-Esfahani A, Heikenwalder M, Schoonjans K, Aebersold R.

Sci Rep. 2019 May 6;9(1):6913. doi: 10.1038/s41598-019-43091-z.

4.

Complex-centric proteome profiling by SEC-SWATH-MS.

Heusel M, Bludau I, Rosenberger G, Hafen R, Frank M, Banaei-Esfahani A, van Drogen A, Collins BC, Gstaiger M, Aebersold R.

Mol Syst Biol. 2019 Jan 14;15(1):e8438. doi: 10.15252/msb.20188438.

5.

Systems proteomics approaches to study bacterial pathogens: application to Mycobacterium tuberculosis.

Banaei-Esfahani A, Nicod C, Aebersold R, Collins BC.

Curr Opin Microbiol. 2017 Oct;39:64-72. doi: 10.1016/j.mib.2017.09.013. Epub 2017 Oct 13. Review.

6.

A Case for a Human Immuno-Peptidome Project Consortium.

Caron E, Aebersold R, Banaei-Esfahani A, Chong C, Bassani-Sternberg M.

Immunity. 2017 Aug 15;47(2):203-208. doi: 10.1016/j.immuni.2017.07.010.

7.

Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival.

Cortes T, Schubert OT, Banaei-Esfahani A, Collins BC, Aebersold R, Young DB.

Sci Rep. 2017 Aug 15;7(1):8208. doi: 10.1038/s41598-017-08306-1.

8.

Elucidation of host-pathogen protein-protein interactions to uncover mechanisms of host cell rewiring.

Nicod C, Banaei-Esfahani A, Collins BC.

Curr Opin Microbiol. 2017 Oct;39:7-15. doi: 10.1016/j.mib.2017.07.005. Epub 2017 Aug 11. Review.

9.

HCSD: the human cancer secretome database.

Feizi A, Banaei-Esfahani A, Nielsen J.

Database (Oxford). 2015 Jun 14;2015:bav051. doi: 10.1093/database/bav051. Print 2015.

10.

The potential roles of actin in the nucleus.

Falahzadeh K, Banaei-Esfahani A, Shahhoseini M.

Cell J. 2015 Spring;17(1):7-14. Epub 2015 Apr 8. Review.

11.

MicroRNAs that target RGS5.

Banaei-Esfahani A, Moazzeni H, Nosar PN, Amin S, Arefian E, Soleimani M, Yazdani S, Elahi E.

Iran J Basic Med Sci. 2015 Feb;18(2):108-14.

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