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Items: 1 to 50 of 449

1.

Sustainable production of glutathione from lignocellulose-derived sugars using engineered Saccharomyces cerevisiae.

Kobayashi J, Sasaki D, Bamba T, Hasunuma T, Kondo A.

Appl Microbiol Biotechnol. 2018 Nov 17. doi: 10.1007/s00253-018-9493-4. [Epub ahead of print]

PMID:
30448906
2.

Silica-based hybrid porous layers to enhance the retention and efficiency of open tubular capillary columns with a 5 μm inner diame9ter.

Hara T, Izumi Y, Nakao M, Hata K, Baron GV, Bamba T, Desmet G.

J Chromatogr A. 2018 Dec 14;1580:63-71. doi: 10.1016/j.chroma.2018.10.023. Epub 2018 Oct 16.

PMID:
30424964
3.

Comparison of sequential derivatization with concurrent methods for GC/MS-based metabolomics.

Miyagawa H, Bamba T.

J Biosci Bioeng. 2018 Oct 10. pii: S1389-1723(17)31257-4. doi: 10.1016/j.jbiosc.2018.07.015. [Epub ahead of print]

PMID:
30316697
4.

Defective cortex glia plasma membrane structure underlies light-induced epilepsy in cpes mutants.

Kunduri G, Turner-Evans D, Konya Y, Izumi Y, Nagashima K, Lockett S, Holthuis J, Bamba T, Acharya U, Acharya JK.

Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):E8919-E8928. doi: 10.1073/pnas.1808463115. Epub 2018 Sep 5.

5.

Identification of Metabolites Associated with Onset of CAD in Diabetic Patients Using CE-MS Analysis: A Pilot Study.

Omori K, Katakami N, Yamamoto Y, Ninomiya H, Takahara M, Matsuoka TA, Bamba T, Fukusaki E, Shimomura I.

J Atheroscler Thromb. 2018 Aug 1. doi: 10.5551/jat.42945. [Epub ahead of print]

6.

Highly Accurate Detection and Identification Methodology of Xenobiotic Metabolites Using Stable Isotope Labeling, Data Mining Techniques, and Time-Dependent Profiling Based on LC/HRMS/MS.

Takahashi M, Izumi Y, Iwahashi F, Nakayama Y, Iwakoshi M, Nakao M, Yamato S, Fukusaki E, Bamba T.

Anal Chem. 2018 Aug 7;90(15):9068-9076. doi: 10.1021/acs.analchem.8b01388. Epub 2018 Jul 19.

PMID:
30024726
7.

Dietary Intake of Curcumin Improves eIF2 Signaling and Reduces Lipid Levels in the White Adipose Tissue of Obese Mice.

Kobori M, Takahashi Y, Takeda H, Takahashi M, Izumi Y, Akimoto Y, Sakurai M, Oike H, Nakagawa T, Itoh M, Bamba T, Kimura T.

Sci Rep. 2018 Jun 13;8(1):9081. doi: 10.1038/s41598-018-27105-w.

8.

Hypoxanthine Secretion from Human Adipose Tissue and its Increase in Hypoxia.

Nagao H, Nishizawa H, Tanaka Y, Fukata T, Mizushima T, Furuno M, Bamba T, Tsushima Y, Fujishima Y, Kita S, Funahashi T, Maeda N, Mori M, Fukusaki E, Shimomura I.

Obesity (Silver Spring). 2018 Jul;26(7):1168-1178. doi: 10.1002/oby.22202. Epub 2018 Jun 7.

PMID:
29877616
9.

Widely-targeted quantitative lipidomics method by supercritical fluid chromatography triple quadrupole mass spectrometry.

Takeda H, Izumi Y, Takahashi M, Paxton T, Tamura S, Koike T, Yu Y, Kato N, Nagase K, Shiomi M, Bamba T.

J Lipid Res. 2018 Jul;59(7):1283-1293. doi: 10.1194/jlr.D083014. Epub 2018 May 3.

PMID:
29724780
10.

Metabolomics approach to reduce the Crabtree effect in continuous culture of Saccharomyces cerevisiae.

Imura M, Iwakiri R, Bamba T, Fukusaki E.

J Biosci Bioeng. 2018 Aug;126(2):183-188. doi: 10.1016/j.jbiosc.2018.02.008. Epub 2018 Apr 22.

PMID:
29685822
11.

Adiponectin/T-cadherin system enhances exosome biogenesis and decreases cellular ceramides by exosomal release.

Obata Y, Kita S, Koyama Y, Fukuda S, Takeda H, Takahashi M, Fujishima Y, Nagao H, Masuda S, Tanaka Y, Nakamura Y, Nishizawa H, Funahashi T, Ranscht B, Izumi Y, Bamba T, Fukusaki E, Hanayama R, Shimada S, Maeda N, Shimomura I.

JCI Insight. 2018 Apr 19;3(8). pii: 99680. doi: 10.1172/jci.insight.99680. [Epub ahead of print]

12.

Development of an analytical method for polycyclic aromatic hydrocarbons in coffee beverages and dark beer using novel high-sensitivity technique of supercritical fluid chromatography/mass spectrometry.

Yoshioka T, Nagatomi Y, Harayama K, Bamba T.

J Biosci Bioeng. 2018 Jul;126(1):126-130. doi: 10.1016/j.jbiosc.2018.01.014. Epub 2018 Feb 28.

PMID:
29499993
13.

Microbe participation in aroma production during soy sauce fermentation.

Harada R, Yuzuki M, Ito K, Shiga K, Bamba T, Fukusaki E.

J Biosci Bioeng. 2018 Jun;125(6):688-694. doi: 10.1016/j.jbiosc.2017.12.004. Epub 2018 Feb 1.

PMID:
29366719
14.

Ameliorating effects of D-47, a newly developed compound, on lipid metabolism in an animal model of familial hypercholesterolemia (WHHLMI rabbits).

Tamura S, Koike Y, Takeda H, Koike T, Izumi Y, Nagasaka R, Tsunoda T, Tori M, Ogawa K, Bamba T, Shiomi M.

Eur J Pharmacol. 2018 Mar 5;822:147-153. doi: 10.1016/j.ejphar.2018.01.013.

PMID:
29355561
15.

Improvement of Xylose Fermentation Ability under Heat and Acid Co-Stress in Saccharomyces cerevisiae Using Genome Shuffling Technique.

Inokuma K, Iwamoto R, Bamba T, Hasunuma T, Kondo A.

Front Bioeng Biotechnol. 2017 Dec 20;5:81. doi: 10.3389/fbioe.2017.00081. eCollection 2017.

16.

Enhanced cell-surface display of a heterologous protein using SED1 anchoring system in SED1-disrupted Saccharomyces cerevisiae strain.

Bamba T, Inokuma K, Hasunuma T, Kondo A.

J Biosci Bioeng. 2018 Mar;125(3):306-310. doi: 10.1016/j.jbiosc.2017.09.013. Epub 2017 Nov 23.

PMID:
29175124
17.

Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.

Bowden JA, Heckert A, Ulmer CZ, Jones CM, Koelmel JP, Abdullah L, Ahonen L, Alnouti Y, Armando AM, Asara JM, Bamba T, Barr JR, Bergquist J, Borchers CH, Brandsma J, Breitkopf SB, Cajka T, Cazenave-Gassiot A, Checa A, Cinel MA, Colas RA, Cremers S, Dennis EA, Evans JE, Fauland A, Fiehn O, Gardner MS, Garrett TJ, Gotlinger KH, Han J, Huang Y, Neo AH, Hyötyläinen T, Izumi Y, Jiang H, Jiang H, Jiang J, Kachman M, Kiyonami R, Klavins K, Klose C, Köfeler HC, Kolmert J, Koal T, Koster G, Kuklenyik Z, Kurland IJ, Leadley M, Lin K, Maddipati KR, McDougall D, Meikle PJ, Mellett NA, Monnin C, Moseley MA, Nandakumar R, Oresic M, Patterson R, Peake D, Pierce JS, Post M, Postle AD, Pugh R, Qiu Y, Quehenberger O, Ramrup P, Rees J, Rembiesa B, Reynaud D, Roth MR, Sales S, Schuhmann K, Schwartzman ML, Serhan CN, Shevchenko A, Somerville SE, St John-Williams L, Surma MA, Takeda H, Thakare R, Thompson JW, Torta F, Triebl A, Trötzmüller M, Ubhayasekera SJK, Vuckovic D, Weir JM, Welti R, Wenk MR, Wheelock CE, Yao L, Yuan M, Zhao XH, Zhou S.

J Lipid Res. 2017 Dec;58(12):2275-2288. doi: 10.1194/jlr.M079012. Epub 2017 Oct 6.

18.

Lipophagy maintains energy homeostasis in the kidney proximal tubule during prolonged starvation.

Minami S, Yamamoto T, Takabatake Y, Takahashi A, Namba T, Matsuda J, Kimura T, Kaimori JY, Matsui I, Hamano T, Takeda H, Takahashi M, Izumi Y, Bamba T, Matsusaka T, Niimura F, Isaka Y.

Autophagy. 2017 Oct 3;13(10):1629-1647. doi: 10.1080/15548627.2017.1341464. Epub 2017 Aug 16.

19.

Development of a split-flow system for high precision variable sample introduction in supercritical fluid chromatography.

Sakai M, Hayakawa Y, Funada Y, Ando T, Fukusaki E, Bamba T.

J Chromatogr A. 2017 Sep 15;1515:218-231. doi: 10.1016/j.chroma.2017.07.077. Epub 2017 Jul 25.

PMID:
28802523
20.

Solid-phase analytical derivatization for gas-chromatography-mass-spectrometry-based metabolomics.

Takeo E, Sasano R, Shimma S, Bamba T, Fukusaki E.

J Biosci Bioeng. 2017 Dec;124(6):700-706. doi: 10.1016/j.jbiosc.2017.07.006. Epub 2017 Aug 8.

PMID:
28800906
21.

Quantitative metabolomics of a xylose-utilizing Saccharomyces cerevisiae strain expressing the Bacteroides thetaiotaomicron xylose isomerase on glucose and xylose.

Mert MJ, Rose SH, la Grange DC, Bamba T, Hasunuma T, Kondo A, van Zyl WH.

J Ind Microbiol Biotechnol. 2017 Oct;44(10):1459-1470. doi: 10.1007/s10295-017-1969-1. Epub 2017 Jul 25.

PMID:
28744577
22.

[Study of Interaction between Fluorinated Coating Glass and the Medicines].

Kawano Y, Otsu S, Bamba T, Hanawa T.

Yakugaku Zasshi. 2017 Nov 1;137(11):1409-1417. doi: 10.1248/yakushi.17-00108. Epub 2017 Jul 25. Japanese.

23.

Metabolic engineering of oleaginous fungus Mortierella alpina for high production of oleic and linoleic acids.

Sakamoto T, Sakuradani E, Okuda T, Kikukawa H, Ando A, Kishino S, Izumi Y, Bamba T, Shima J, Ogawa J.

Bioresour Technol. 2017 Dec;245(Pt B):1610-1615. doi: 10.1016/j.biortech.2017.06.089. Epub 2017 Jun 19.

PMID:
28673516
24.

Importance of optimizing chromatographic conditions and mass spectrometric parameters for supercritical fluid chromatography/mass spectrometry.

Fujito Y, Hayakawa Y, Izumi Y, Bamba T.

J Chromatogr A. 2017 Jul 28;1508:138-147. doi: 10.1016/j.chroma.2017.05.071. Epub 2017 Jun 2.

PMID:
28624150
25.

Intracellular metabolite β-glucosylceramide is an endogenous Mincle ligand possessing immunostimulatory activity.

Nagata M, Izumi Y, Ishikawa E, Kiyotake R, Doi R, Iwai S, Omahdi Z, Yamaji T, Miyamoto T, Bamba T, Yamasaki S.

Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):E3285-E3294. doi: 10.1073/pnas.1618133114. Epub 2017 Apr 3.

27.

Use of on-line supercritical fluid extraction-supercritical fluid chromatography/tandem mass spectrometry to analyze disease biomarkers in dried serum spots compared with serum analysis using liquid chromatography/tandem mass spectrometry.

Suzuki M, Nishiumi S, Kobayashi T, Sakai A, Iwata Y, Uchikata T, Izumi Y, Azuma T, Bamba T, Yoshida M.

Rapid Commun Mass Spectrom. 2017 May 30;31(10):886-894. doi: 10.1002/rcm.7857.

PMID:
28332299
28.

Distinct signatures of dental plaque metabolic byproducts dictated by periodontal inflammatory status.

Sakanaka A, Kuboniwa M, Hashino E, Bamba T, Fukusaki E, Amano A.

Sci Rep. 2017 Feb 21;7:42818. doi: 10.1038/srep42818.

29.

Effect of Furan Fatty Acids and 3-Methyl-2,4-nonanedione on Light-Induced Off-Odor in Soybean Oil.

Sano T, Okabe R, Iwahashi M, Imagi J, Sato T, Yamashita T, Fukusaki E, Bamba T.

J Agric Food Chem. 2017 Mar 15;65(10):2136-2140. doi: 10.1021/acs.jafc.6b05056. Epub 2017 Feb 28.

PMID:
28215079
30.

[Long-Term Complete Response in Postoperative Multiple Lung and Mediastinal Lymph Node Metastases of Esophageal Cancer Using Systemic Chemotherapy with DCF Treatment - A Case Report].

Katsumi C, Bamba T, Nakagawa S, Aizawa M, Matsuki A, Yabusaki H, Homma K.

Gan To Kagaku Ryoho. 2017 Jan;44(1):75-78. Japanese.

PMID:
28174385
31.

Increased Dynamics of Tricarboxylic Acid Cycle and Glutamate Synthesis in Obese Adipose Tissue: IN VIVO METABOLIC TURNOVER ANALYSIS.

Nagao H, Nishizawa H, Bamba T, Nakayama Y, Isozumi N, Nagamori S, Kanai Y, Tanaka Y, Kita S, Fukuda S, Funahashi T, Maeda N, Fukusaki E, Shimomura I.

J Biol Chem. 2017 Mar 17;292(11):4469-4483. doi: 10.1074/jbc.M116.770172. Epub 2017 Jan 24.

32.

Influence of yeast and lactic acid bacterium on the constituent profile of soy sauce during fermentation.

Harada R, Yuzuki M, Ito K, Shiga K, Bamba T, Fukusaki E.

J Biosci Bioeng. 2017 Feb;123(2):203-208. doi: 10.1016/j.jbiosc.2016.08.010. Epub 2016 Dec 7.

PMID:
27939139
33.

Lipoprotein profiling methodology based on determination of apolipoprotein concentration.

Takeda H, Izumi Y, Tomita A, Koike T, Shiomi M, Fukusaki E, Matsuda F, Bamba T.

Bioanalysis. 2017 Jan;9(1):9-19.

PMID:
27921455
34.

Simultaneous profiling of 17 steroid hormones for the evaluation of endocrine-disrupting chemicals in H295R cells.

Jumhawan U, Yamashita T, Ishida K, Fukusaki E, Bamba T.

Bioanalysis. 2017 Jan;9(1):67-69.

PMID:
27921452
35.

Two isoforms of TALDO1 generated by alternative translational initiation show differential nucleocytoplasmic distribution to regulate the global metabolic network.

Moriyama T, Tanaka S, Nakayama Y, Fukumoto M, Tsujimura K, Yamada K, Bamba T, Yoneda Y, Fukusaki E, Oka M.

Sci Rep. 2016 Oct 5;6:34648. doi: 10.1038/srep34648.

36.

Quality evaluation of green tea leaf cultured under artificial light condition using gas chromatography/mass spectrometry.

Miyauchi S, Yonetani T, Yuki T, Tomio A, Bamba T, Fukusaki E.

J Biosci Bioeng. 2017 Feb;123(2):197-202. doi: 10.1016/j.jbiosc.2016.07.017. Epub 2016 Aug 24.

PMID:
27568369
37.

Prediction of Periodontal Inflammation via Metabolic Profiling of Saliva.

Kuboniwa M, Sakanaka A, Hashino E, Bamba T, Fukusaki E, Amano A.

J Dent Res. 2016 Nov;95(12):1381-1386. doi: 10.1177/0022034516661142. Epub 2016 Jul 29.

PMID:
27470067
38.

Metabolomic Analysis of Gingival Crevicular Fluid Using Gas Chromatography/Mass Spectrometry.

Ozeki M, Nozaki T, Aoki J, Bamba T, Jensen KR, Murakami S, Toyoda M.

Mass Spectrom (Tokyo). 2016;5(1):A0047. doi: 10.5702/massspectrometry.A0047. Epub 2016 Jun 27.

39.

Corrigendum: New Insight into the Role of the Calvin Cycle: Reutilization of CO2 Emitted through Sugar Degradation.

Shimizu R, Dempo Y, Nakayama Y, Nakamura S, Bamba T, Fukusaki E, Fukui T.

Sci Rep. 2016 Jun 20;6:27961. doi: 10.1038/srep27961. No abstract available.

40.

A High Phosphorus Diet Affects Lipid Metabolism in Rat Liver: A DNA Microarray Analysis.

Chun S, Bamba T, Suyama T, Ishijima T, Fukusaki E, Abe K, Nakai Y.

PLoS One. 2016 May 17;11(5):e0155386. doi: 10.1371/journal.pone.0155386. eCollection 2016.

41.

Enhanced cell-surface display and secretory production of cellulolytic enzymes with Saccharomyces cerevisiae Sed1 signal peptide.

Inokuma K, Bamba T, Ishii J, Ito Y, Hasunuma T, Kondo A.

Biotechnol Bioeng. 2016 Nov;113(11):2358-66. doi: 10.1002/bit.26008. Epub 2016 Jun 3.

PMID:
27183011
42.

Relationship between 3-Methyl-2,4-nonanedione Concentration and Intensity of Light-induced Off-odor in Soy Bean Oil.

Sano T, Iwahashi M, Imagi J, Sato T, Yamashita T, Fukusaki E, Bamba T.

J Oleo Sci. 2016 May 1;65(5):447-50. doi: 10.5650/jos.ess15233. Epub 2016 Apr 15.

43.

In vitro steroid profiling system for the evaluation of endocrine disruptors.

Nakano Y, Yamashita T, Okuno M, Fukusaki E, Bamba T.

J Biosci Bioeng. 2016 Sep;122(3):370-7. doi: 10.1016/j.jbiosc.2016.02.008. Epub 2016 Mar 12.

PMID:
26979344
44.

Insights into the formation mechanism of chloropropanol fatty acid esters under laboratory-scale deodorization conditions.

Hori K, Hori-Koriyama N, Tsumura K, Fukusaki E, Bamba T.

J Biosci Bioeng. 2016 Aug;122(2):246-51. doi: 10.1016/j.jbiosc.2015.12.018. Epub 2016 Jan 25.

PMID:
26822095
45.

Method for the Compound Annotation of Conjugates in Nontargeted Metabolomics Using Accurate Mass Spectrometry, Multistage Product Ion Spectra and Compound Database Searching.

Ogura T, Bamba T, Tai A, Fukusaki E.

Mass Spectrom (Tokyo). 2015;4(1):A0036. doi: 10.5702/massspectrometry.A0036. Epub 2015 Mar 26.

46.

Multi-Component Profiling of Trace Volatiles in Blood by Gas Chromatography/Mass Spectrometry with Dynamic Headspace Extraction.

Kakuta S, Yamashita T, Nishiumi S, Yoshida M, Fukusaki E, Bamba T.

Mass Spectrom (Tokyo). 2015;4(1):A0034. doi: 10.5702/massspectrometry.A0034. Epub 2015 Jan 15.

47.

Quantification of coffee blends for authentication of Asian palm civet coffee (Kopi Luwak) via metabolomics: A proof of concept.

Jumhawan U, Putri SP, Yusianto, Bamba T, Fukusaki E.

J Biosci Bioeng. 2016 Jul;122(1):79-84. doi: 10.1016/j.jbiosc.2015.12.008. Epub 2016 Jan 6.

PMID:
26777237
48.

Disruption of PHO13 improves ethanol production via the xylose isomerase pathway.

Bamba T, Hasunuma T, Kondo A.

AMB Express. 2016 Mar;6(1):4. doi: 10.1186/s13568-015-0175-7. Epub 2016 Jan 14.

49.

Quantitative target analysis and kinetic profiling of acyl-CoAs reveal the rate-limiting step in cyanobacterial 1-butanol production.

Noguchi S, Putri SP, Lan EI, Laviña WA, Dempo Y, Bamba T, Liao JC, Fukusaki E.

Metabolomics. 2016;12:26. Epub 2016 Jan 4.

50.

Cell surface engineering of Saccharomyces cerevisiae combined with membrane separation technology for xylitol production from rice straw hydrolysate.

Guirimand G, Sasaki K, Inokuma K, Bamba T, Hasunuma T, Kondo A.

Appl Microbiol Biotechnol. 2016 Apr;100(8):3477-87. doi: 10.1007/s00253-015-7179-8. Epub 2015 Dec 3.

PMID:
26631184

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