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Neural stem cell quiescence and stemness are molecularly distinct outputs of the Notch3 signalling cascade in the vertebrate adult brain.

Than-Trong E, Ortica-Gatti S, Mella S, Nepal C, Alunni A, Bally-Cuif L.

Development. 2018 May 15;145(10). pii: dev161034. doi: 10.1242/dev.161034.


Pharmacological analysis of zebrafish lphn3.1 morphant larvae suggests that saturated dopaminergic signaling could underlie the ADHD-like locomotor hyperactivity.

Lange M, Froc C, Grunwald H, Norton WHJ, Bally-Cuif L.

Prog Neuropsychopharmacol Biol Psychiatry. 2018 Jun 8;84(Pt A):181-189. doi: 10.1016/j.pnpbp.2018.02.010. Epub 2018 Feb 26.


Life-Long Neurogenic Activity of Individual Neural Stem Cells and Continuous Growth Establish an Outside-In Architecture in the Teleost Pallium.

Furlan G, Cuccioli V, Vuillemin N, Dirian L, Muntasell AJ, Coolen M, Dray N, Bedu S, Houart C, Beaurepaire E, Foucher I, Bally-Cuif L.

Curr Biol. 2017 Nov 6;27(21):3288-3301.e3. doi: 10.1016/j.cub.2017.09.052. Epub 2017 Oct 26.


Embryonic origin and lineage hierarchies of the neural progenitor subtypes building the zebrafish adult midbrain.

Galant S, Furlan G, Coolen M, Dirian L, Foucher I, Bally-Cuif L.

Dev Biol. 2016 Dec 1;420(1):120-135. doi: 10.1016/j.ydbio.2016.09.022. Epub 2016 Sep 28.


A Nuclear Role for miR-9 and Argonaute Proteins in Balancing Quiescent and Activated Neural Stem Cell States.

Katz S, Cussigh D, Urbán N, Blomfield I, Guillemot F, Bally-Cuif L, Coolen M.

Cell Rep. 2016 Oct 25;17(5):1383-1398. doi: 10.1016/j.celrep.2016.09.088.


The Notch meeting: an odyssey from structure to function.

Chitnis A, Bally-Cuif L.

Development. 2016 Apr 1;143(7):1229. doi: 10.1242/dev.136846. Epub 2016 Mar 7. No abstract available.


A comparative view of regenerative neurogenesis in vertebrates.

Alunni A, Bally-Cuif L.

Development. 2016 Mar 1;143(5):741-53. doi: 10.1242/dev.122796. Review.


Transcriptional, post-transcriptional and chromatin-associated regulation of pri-miRNAs, pre-miRNAs and moRNAs.

Nepal C, Coolen M, Hadzhiev Y, Cussigh D, Mydel P, Steen VM, Carninci P, Andersen JB, Bally-Cuif L, Müller F, Lenhard B.

Nucleic Acids Res. 2016 Apr 20;44(7):3070-81. doi: 10.1093/nar/gkv1354. Epub 2015 Dec 15.


A Serotonin Circuit Acts as an Environmental Sensor to Mediate Midline Axon Crossing through EphrinB2.

Xing L, Son JH, Stevenson TJ, Lillesaar C, Bally-Cuif L, Dahl T, Bonkowsky JL.

J Neurosci. 2015 Nov 4;35(44):14794-808. doi: 10.1523/JNEUROSCI.1295-15.2015.


Large-scale live imaging of adult neural stem cells in their endogenous niche.

Dray N, Bedu S, Vuillemin N, Alunni A, Coolen M, Krecsmarik M, Supatto W, Beaurepaire E, Bally-Cuif L.

Development. 2015 Oct 15;142(20):3592-600. doi: 10.1242/dev.123018. Epub 2015 Sep 22.


Copy number variants in patients with intellectual disability affect the regulation of ARX transcription factor gene.

Ishibashi M, Manning E, Shoubridge C, Krecsmarik M, Hawkins TA, Giacomotto J, Zhao T, Mueller T, Bader PI, Cheung SW, Stankiewicz P, Bain NL, Hackett A, Reddy CC, Mechaly AS, Peers B, Wilson SW, Lenhard B, Bally-Cuif L, Gecz J, Becker TS, Rinkwitz S.

Hum Genet. 2015 Nov;134(11-12):1163-82. doi: 10.1007/s00439-015-1594-x. Epub 2015 Sep 4.


Radial glia and neural progenitors in the adult zebrafish central nervous system.

Than-Trong E, Bally-Cuif L.

Glia. 2015 Aug;63(8):1406-28. doi: 10.1002/glia.22856. Epub 2015 May 14. Review.


Long-range evolutionary constraints reveal cis-regulatory interactions on the human X chromosome.

Naville M, Ishibashi M, Ferg M, Bengani H, Rinkwitz S, Krecsmarik M, Hawkins TA, Wilson SW, Manning E, Chilamakuri CS, Wilson DI, Louis A, Lucy Raymond F, Rastegar S, Strähle U, Lenhard B, Bally-Cuif L, van Heyningen V, FitzPatrick DR, Becker TS, Roest Crollius H.

Nat Commun. 2015 Apr 24;6:6904. doi: 10.1038/ncomms7904.


Editorial for "Regulatory RNAs in the nervous system".

Cellerino A, Bally-Cuif L, Pizzorusso T.

Front Cell Neurosci. 2015 Feb 10;9:38. doi: 10.3389/fncel.2015.00038. eCollection 2015. No abstract available.


The helix-loop-helix protein id1 controls stem cell proliferation during regenerative neurogenesis in the adult zebrafish telencephalon.

Rodriguez Viales R, Diotel N, Ferg M, Armant O, Eich J, Alunni A, März M, Bally-Cuif L, Rastegar S, Strähle U.

Stem Cells. 2015 Mar;33(3):892-903. doi: 10.1002/stem.1883.


Emotions and motivated behavior converge on an amygdala-like structure in the zebrafish.

von Trotha JW, Vernier P, Bally-Cuif L.

Eur J Neurosci. 2014 Nov;40(9):3302-15. doi: 10.1111/ejn.12692. Epub 2014 Aug 22.


A self-organizing miR-132/Ctbp2 circuit regulates bimodal notch signals and glial progenitor fate choice during spinal cord maturation.

Salta E, Lau P, Sala Frigerio C, Coolen M, Bally-Cuif L, De Strooper B.

Dev Cell. 2014 Aug 25;30(4):423-36. doi: 10.1016/j.devcel.2014.07.006. Epub 2014 Aug 14.


Spatial regionalization and heterochrony in the formation of adult pallial neural stem cells.

Dirian L, Galant S, Coolen M, Chen W, Bedu S, Houart C, Bally-Cuif L, Foucher I.

Dev Cell. 2014 Jul 28;30(2):123-36. doi: 10.1016/j.devcel.2014.05.012. Epub 2014 Jul 10.


miR-9: a versatile regulator of neurogenesis.

Coolen M, Katz S, Bally-Cuif L.

Front Cell Neurosci. 2013 Nov 20;7:220. doi: 10.3389/fncel.2013.00220. Review.


[miR-9: a key factor of the physiopathological regulation of the neural progenitor state].

Coolen M, Bally-Cuif L.

Med Sci (Paris). 2013 Nov;29(11):1010-7. doi: 10.1051/medsci/20132911018. Epub 2013 Nov 20. Review. French.


Crybb2 coding for βB2-crystallin affects sensorimotor gating and hippocampal function.

Sun M, Hölter SM, Stepan J, Garrett L, Genius J, Kremmer E, Hrabě de Angelis M, Wurst W, Lie DC, Bally-Cuif L, Eder M, Rujescu D, Graw J.

Mamm Genome. 2013 Oct;24(9-10):333-48. doi: 10.1007/s00335-013-9478-7. Epub 2013 Oct 6.


Inter-individual and inter-strain variations in zebrafish locomotor ontogeny.

Lange M, Neuzeret F, Fabreges B, Froc C, Bedu S, Bally-Cuif L, Norton WH.

PLoS One. 2013 Aug 9;8(8):e70172. doi: 10.1371/journal.pone.0070172. eCollection 2013.


Notch3 signaling gates cell cycle entry and limits neural stem cell amplification in the adult pallium.

Alunni A, Krecsmarik M, Bosco A, Galant S, Pan L, Moens CB, Bally-Cuif L.

Development. 2013 Aug;140(16):3335-47. doi: 10.1242/dev.095018. Epub 2013 Jul 17.


Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond.

Kalueff AV, Gebhardt M, Stewart AM, Cachat JM, Brimmer M, Chawla JS, Craddock C, Kyzar EJ, Roth A, Landsman S, Gaikwad S, Robinson K, Baatrup E, Tierney K, Shamchuk A, Norton W, Miller N, Nicolson T, Braubach O, Gilman CP, Pittman J, Rosemberg DB, Gerlai R, Echevarria D, Lamb E, Neuhauss SC, Weng W, Bally-Cuif L, Schneider H; Zebrafish Neuroscience Research Consortium.

Zebrafish. 2013 Mar;10(1):70-86. doi: 10.1089/zeb.2012.0861. Review.


Development of hypothalamic serotoninergic neurons requires Fgf signalling via the ETS-domain transcription factor Etv5b.

Bosco A, Bureau C, Affaticati P, Gaspar P, Bally-Cuif L, Lillesaar C.

Development. 2013 Jan 15;140(2):372-84. doi: 10.1242/dev.089094.


The ADHD-linked gene Lphn3.1 controls locomotor activity and impulsivity in zebrafish.

Lange M, Norton W, Coolen M, Chaminade M, Merker S, Proft F, Schmitt A, Vernier P, Lesch KP, Bally-Cuif L.

Mol Psychiatry. 2012 Sep;17(9):855. doi: 10.1038/mp.2012.119. No abstract available.


miR-9 controls the timing of neurogenesis through the direct inhibition of antagonistic factors.

Coolen M, Thieffry D, Drivenes Ø, Becker TS, Bally-Cuif L.

Dev Cell. 2012 May 15;22(5):1052-64. doi: 10.1016/j.devcel.2012.03.003.


EuFishBioMed (COST Action BM0804): a European network to promote the use of small fishes in biomedical research.

Strähle U, Bally-Cuif L, Kelsh R, Beis D, Mione M, Panula P, Figueras A, Gothilf Y, Brösamle C, Geisler R, Knedlitschek G.

Zebrafish. 2012 Jun;9(2):90-3. doi: 10.1089/zeb.2012.0742. Epub 2012 Apr 26.


The ADHD-susceptibility gene lphn3.1 modulates dopaminergic neuron formation and locomotor activity during zebrafish development.

Lange M, Norton W, Coolen M, Chaminade M, Merker S, Proft F, Schmitt A, Vernier P, Lesch KP, Bally-Cuif L.

Mol Psychiatry. 2012 Sep;17(9):946-54. doi: 10.1038/mp.2012.29. Epub 2012 Apr 17.


Homeodomain protein otp and activity-dependent splicing modulate neuronal adaptation to stress.

Amir-Zilberstein L, Blechman J, Sztainberg Y, Norton WH, Reuveny A, Borodovsky N, Tahor M, Bonkowsky JL, Bally-Cuif L, Chen A, Levkowitz G.

Neuron. 2012 Jan 26;73(2):279-91. doi: 10.1016/j.neuron.2011.11.019.


Stab wound injury of the zebrafish telencephalon: a model for comparative analysis of reactive gliosis.

Baumgart EV, Barbosa JS, Bally-Cuif L, Götz M, Ninkovic J.

Glia. 2012 Mar;60(3):343-57. doi: 10.1002/glia.22269. Epub 2011 Nov 21.


Modulation of Fgfr1a signaling in zebrafish reveals a genetic basis for the aggression-boldness syndrome.

Norton WH, Stumpenhorst K, Faus-Kessler T, Folchert A, Rohner N, Harris MP, Callebert J, Bally-Cuif L.

J Neurosci. 2011 Sep 28;31(39):13796-807. doi: 10.1523/JNEUROSCI.2892-11.2011.


The Enhancer of split transcription factor Her8a is a novel dimerisation partner for Her3 that controls anterior hindbrain neurogenesis in zebrafish.

Webb KJ, Coolen M, Gloeckner CJ, Stigloher C, Bahn B, Topp S, Ueffing M, Bally-Cuif L.

BMC Dev Biol. 2011 May 17;11:27. doi: 10.1186/1471-213X-11-27.


Expression of hairy/enhancer of split genes in neural progenitors and neurogenesis domains of the adult zebrafish brain.

Chapouton P, Webb KJ, Stigloher C, Alunni A, Adolf B, Hesl B, Topp S, Kremmer E, Bally-Cuif L.

J Comp Neurol. 2011 Jun 15;519(9):1748-69. doi: 10.1002/cne.22599.


Clonal analysis by distinct viral vectors identifies bona fide neural stem cells in the adult zebrafish telencephalon and characterizes their division properties and fate.

Rothenaigner I, Krecsmarik M, Hayes JA, Bahn B, Lepier A, Fortin G, Götz M, Jagasia R, Bally-Cuif L.

Development. 2011 Apr;138(8):1459-69. doi: 10.1242/dev.058156. Epub 2011 Mar 2.


Her9 represses neurogenic fate downstream of Tbx1 and retinoic acid signaling in the inner ear.

Radosevic M, Robert-Moreno A, Coolen M, Bally-Cuif L, Alsina B.

Development. 2011 Feb;138(3):397-408. doi: 10.1242/dev.056093.


Adult zebrafish as a model organism for behavioural genetics.

Norton W, Bally-Cuif L.

BMC Neurosci. 2010 Aug 2;11:90. doi: 10.1186/1471-2202-11-90. Review.


Notch activity levels control the balance between quiescence and recruitment of adult neural stem cells.

Chapouton P, Skupien P, Hesl B, Coolen M, Moore JC, Madelaine R, Kremmer E, Faus-Kessler T, Blader P, Lawson ND, Bally-Cuif L.

J Neurosci. 2010 Jun 9;30(23):7961-74. doi: 10.1523/JNEUROSCI.6170-09.2010.


A cross-disciplinary approach to understanding neural stem cells in development and disease.

Henrique D, Bally-Cuif L.

Development. 2010 Jun;137(12):1933-8. doi: 10.1242/dev.052621.


Photoactivation of the CreER T2 recombinase for conditional site-specific recombination with high spatiotemporal resolution.

Sinha DK, Neveu P, Gagey N, Aujard I, Le Saux T, Rampon C, Gauron C, Kawakami K, Leucht C, Bally-Cuif L, Volovitch M, Bensimon D, Jullien L, Vriz S.

Zebrafish. 2010 Jun;7(2):199-204. doi: 10.1089/zeb.2009.0632.


Heterogeneity in progenitor cell subtypes in the ventricular zone of the zebrafish adult telencephalon.

März M, Chapouton P, Diotel N, Vaillant C, Hesl B, Takamiya M, Lam CS, Kah O, Bally-Cuif L, Strähle U.

Glia. 2010 May;58(7):870-88. doi: 10.1002/glia.20971.


MicroRNAs in brain development and physiology.

Coolen M, Bally-Cuif L.

Curr Opin Neurobiol. 2009 Oct;19(5):461-70. doi: 10.1016/j.conb.2009.09.006. Epub 2009 Oct 19. Review.


Zebrafish reward mutants reveal novel transcripts mediating the behavioral effects of amphetamine.

Webb KJ, Norton WH, Trümbach D, Meijer AH, Ninkovic J, Topp S, Heck D, Marr C, Wurst W, Theis FJ, Spaink HP, Bally-Cuif L.

Genome Biol. 2009;10(7):R81. doi: 10.1186/gb-2009-10-7-r81. Epub 2009 Jul 31.


Pleiotropic effects in Eya3 knockout mice.

Söker T, Dalke C, Puk O, Floss T, Becker L, Bolle I, Favor J, Hans W, Hölter SM, Horsch M, Kallnik M, Kling E, Moerth C, Schrewe A, Stigloher C, Topp S, Gailus-Durner V, Naton B, Beckers J, Fuchs H, Ivandic B, Klopstock T, Schulz H, Wolf E, Wurst W, Bally-Cuif L, de Angelis MH, Graw J.

BMC Dev Biol. 2008 Dec 22;8:118. doi: 10.1186/1471-213X-8-118.


Axonal projections originating from raphe serotonergic neurons in the developing and adult zebrafish, Danio rerio, using transgenics to visualize raphe-specific pet1 expression.

Lillesaar C, Stigloher C, Tannhäuser B, Wullimann MF, Bally-Cuif L.

J Comp Neurol. 2009 Jan 10;512(2):158-82. doi: 10.1002/cne.21887.


[A microRNA as a gatekeeper of the midbrain-hindbrain boundary].

Coolen M, Bally-Cuif L.

Med Sci (Paris). 2008 Oct;24(10):787-9. doi: 10.1051/medsci/20082410787. French. No abstract available.


Comparative analysis of serotonin receptor (HTR1A/HTR1B families) and transporter (slc6a4a/b) gene expression in the zebrafish brain.

Norton WH, Folchert A, Bally-Cuif L.

J Comp Neurol. 2008 Dec 1;511(4):521-42. doi: 10.1002/cne.21831.


NR4A2 controls the differentiation of selective dopaminergic nuclei in the zebrafish brain.

Blin M, Norton W, Bally-Cuif L, Vernier P.

Mol Cell Neurosci. 2008 Dec;39(4):592-604. doi: 10.1016/j.mcn.2008.08.006. Epub 2008 Sep 4.


Enhancer detection and developmental expression of zebrafish sprouty1, a member of the fgf8 synexpression group.

Komisarczuk AZ, Topp S, Stigloher C, Kapsimali M, Bally-Cuif L, Becker TS.

Dev Dyn. 2008 Sep;237(9):2594-603. doi: 10.1002/dvdy.21689.


Gsk3beta/PKA and Gli1 regulate the maintenance of neural progenitors at the midbrain-hindbrain boundary in concert with E(Spl) factor activity.

Ninkovic J, Stigloher C, Lillesaar C, Bally-Cuif L.

Development. 2008 Sep;135(18):3137-48. doi: 10.1242/dev.020479.

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