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Items: 38

1.

Proteomic and lipidomic analyses of the Arabidopsis atg5 autophagy mutant reveal major changes in endoplasmic reticulum and peroxisome metabolisms and in lipid composition.

Havé M, Luo J, Tellier F, Balliau T, Cueff G, Chardon F, Zivy M, Rajjou L, Cacas JL, Masclaux-Daubresse C.

New Phytol. 2019 Aug;223(3):1461-1477. doi: 10.1111/nph.15913. Epub 2019 Jun 22.

PMID:
31077612
2.

Modeling Protein Destiny in Developing Fruit.

Belouah I, Nazaret C, Pétriacq P, Prigent S, Bénard C, Mengin V, Blein-Nicolas M, Denton AK, Balliau T, Augé S, Bouchez O, Mazat JP, Stitt M, Usadel B, Zivy M, Beauvoit B, Gibon Y, Colombié S.

Plant Physiol. 2019 Jul;180(3):1709-1724. doi: 10.1104/pp.19.00086. Epub 2019 Apr 23.

3.

Multi-omics Analysis Reveals Sequential Roles for ABA during Seed Maturation.

Chauffour F, Bailly M, Perreau F, Cueff G, Suzuki H, Collet B, Frey A, Clément G, Soubigou-Taconnat L, Balliau T, Krieger-Liszkay A, Rajjou L, Marion-Poll A.

Plant Physiol. 2019 Jun;180(2):1198-1218. doi: 10.1104/pp.19.00338. Epub 2019 Apr 4.

PMID:
30948555
4.

Peptide filtering differently affects the performances of XIC-based quantification methods.

Belouah I, Blein-Nicolas M, Balliau T, Gibon Y, Zivy M, Colombié S.

J Proteomics. 2019 Feb 20;193:131-141. doi: 10.1016/j.jprot.2018.10.003. Epub 2018 Oct 10.

5.

α-Amylase Mediates Host Acceptance in the Braconid Parasitoid Cotesia flavipes.

Bichang'a G, Da Lage JL, Capdevielle-Dulac C, Zivy M, Balliau T, Sambai K, Le Ru B, Kaiser L, Juma G, Maina ENM, Calatayud PA.

J Chem Ecol. 2018 Nov;44(11):1030-1039. doi: 10.1007/s10886-018-1002-9. Epub 2018 Aug 7.

PMID:
30084041
6.

Control of the ethylene signaling pathway prevents plant defenses during intracellular accommodation of the rhizobia.

Berrabah F, Balliau T, Aït-Salem EH, George J, Zivy M, Ratet P, Gourion B.

New Phytol. 2018 Jul;219(1):310-323. doi: 10.1111/nph.15142. Epub 2018 Apr 18.

7.

Evaluation of Optimized Tube-Gel Methods of Sample Preparation for Large-Scale Plant Proteomics.

Balliau T, Blein-Nicolas M, Zivy M.

Proteomes. 2018 Jan 30;6(1). pii: E6. doi: 10.3390/proteomes6010006.

8.

Increases in activity of proteasome and papain-like cysteine protease in Arabidopsis autophagy mutants: back-up compensatory effect or cell-death promoting effect?

Havé M, Balliau T, Cottyn-Boitte B, Dérond E, Cueff G, Soulay F, Lornac A, Reichman P, Dissmeyer N, Avice JC, Gallois P, Rajjou L, Zivy M, Masclaux-Daubresse C.

J Exp Bot. 2018 Mar 14;69(6):1369-1385. doi: 10.1093/jxb/erx482.

9.

Plant extracellular vesicles are incorporated by a fungal pathogen and inhibit its growth.

Regente M, Pinedo M, San Clemente H, Balliau T, Jamet E, de la Canal L.

J Exp Bot. 2017 Nov 28;68(20):5485-5495. doi: 10.1093/jxb/erx355.

PMID:
29145622
10.

Proline Hydroxylation in Cell Wall Proteins: Is It Yet Possible to Define Rules?

Duruflé H, Hervé V, Balliau T, Zivy M, Dunand C, Jamet E.

Front Plant Sci. 2017 Oct 17;8:1802. doi: 10.3389/fpls.2017.01802. eCollection 2017.

11.

Cell wall modifications of two Arabidopsis thaliana ecotypes, Col and Sha, in response to sub-optimal growth conditions: An integrative study.

Duruflé H, Hervé V, Ranocha P, Balliau T, Zivy M, Chourré J, San Clemente H, Burlat V, Albenne C, Déjean S, Jamet E, Dunand C.

Plant Sci. 2017 Oct;263:183-193. doi: 10.1016/j.plantsci.2017.07.015. Epub 2017 Jul 20.

PMID:
28818374
12.

A Combination of Histological, Physiological, and Proteomic Approaches Shed Light on Seed Desiccation Tolerance of the Basal Angiosperm Amborella trichopoda.

Villegente M, Marmey P, Job C, Galland M, Cueff G, Godin B, Rajjou L, Balliau T, Zivy M, Fogliani B, Sarramegna-Burtet V, Job D.

Proteomes. 2017 Jul 28;5(3). pii: E19. doi: 10.3390/proteomes5030019.

13.

An immunoproteomic approach revealed antigenic proteins enhancing serodiagnosis performance of bird fancier's lung.

Rouzet A, Reboux G, Dalphin JC, Gondouin A, De Vuyst P, Balliau T, Millon L, Valot B, Roussel S.

J Immunol Methods. 2017 Nov;450:58-65. doi: 10.1016/j.jim.2017.07.012. Epub 2017 Jul 29.

PMID:
28760669
14.

The plasma membrane proteome of Medicago truncatula roots as modified by arbuscular mycorrhizal symbiosis.

Aloui A, Recorbet G, Lemaître-Guillier C, Mounier A, Balliau T, Zivy M, Wipf D, Dumas-Gaudot E.

Mycorrhiza. 2018 Jan;28(1):1-16. doi: 10.1007/s00572-017-0789-5. Epub 2017 Jul 19.

PMID:
28725961
15.

Modifications of the soluble proteome of a mediterranean strain of the invasive neurotoxic dinoflagellate Alexandrium catenella under metal stress conditions.

Jean N, Dumont E, Herzi F, Balliau T, Laabir M, Masseret E, Mounier S.

Aquat Toxicol. 2017 Jul;188:80-91. doi: 10.1016/j.aquatox.2017.04.011. Epub 2017 Apr 19.

PMID:
28472730
16.

Cell wall proteome analysis of Arabidopsis thaliana mature stems.

Duruflé H, Clemente HS, Balliau T, Zivy M, Dunand C, Jamet E.

Proteomics. 2017 Apr;17(8). doi: 10.1002/pmic.201600449. Epub 2017 Mar 13.

PMID:
28155257
17.

X!TandemPipeline: A Tool to Manage Sequence Redundancy for Protein Inference and Phosphosite Identification.

Langella O, Valot B, Balliau T, Blein-Nicolas M, Bonhomme L, Zivy M.

J Proteome Res. 2017 Feb 3;16(2):494-503. doi: 10.1021/acs.jproteome.6b00632. Epub 2016 Dec 19.

PMID:
27990826
18.

An enlarged cell wall proteome of Arabidopsis thaliana rosettes.

Hervé V, Duruflé H, San Clemente H, Albenne C, Balliau T, Zivy M, Dunand C, Jamet E.

Proteomics. 2016 Dec;16(24):3183-3187. doi: 10.1002/pmic.201600290.

PMID:
27775233
19.

Arabidopsis thaliana root cell wall proteomics: Increasing the proteome coverage using a combinatorial peptide ligand library and description of unexpected Hyp in peroxidase amino acid sequences.

Nguyen-Kim H, San Clemente H, Balliau T, Zivy M, Dunand C, Albenne C, Jamet E.

Proteomics. 2016 Feb;16(3):491-503. doi: 10.1002/pmic.201500129.

PMID:
26572690
20.

The Amborella vacuolar processing enzyme family.

Poncet V, Scutt C, Tournebize R, Villegente M, Cueff G, Rajjou L, Balliau T, Zivy M, Fogliani B, Job C, de Kochko A, Sarramegna-Burtet V, Job D.

Front Plant Sci. 2015 Aug 21;6:618. doi: 10.3389/fpls.2015.00618. eCollection 2015.

21.

A Systems Approach to Elucidate Heterosis of Protein Abundances in Yeast.

Blein-Nicolas M, Albertin W, da Silva T, Valot B, Balliau T, Masneuf-Pomarède I, Bely M, Marullo P, Sicard D, Dillmann C, de Vienne D, Zivy M.

Mol Cell Proteomics. 2015 Aug;14(8):2056-71. doi: 10.1074/mcp.M115.048058. Epub 2015 May 13.

22.

Interactions between genotype and environment drive the metabolic phenotype within Escherichia coli isolates.

Sabarly V, Aubron C, Glodt J, Balliau T, Langella O, Chevret D, Rigal O, Bourgais A, Picard B, de Vienne D, Denamur E, Bouvet O, Dillmann C.

Environ Microbiol. 2016 Jan;18(1):100-17. doi: 10.1111/1462-2920.12855. Epub 2015 May 11.

PMID:
25808978
23.

An integrated "omics" approach to the characterization of maize (Zea mays L.) mutants deficient in the expression of two genes encoding cytosolic glutamine synthetase.

Amiour N, Imbaud S, Clément G, Agier N, Zivy M, Valot B, Balliau T, Quilleré I, Tercé-Laforgue T, Dargel-Graffin C, Hirel B.

BMC Genomics. 2014 Nov 20;15:1005. doi: 10.1186/1471-2164-15-1005.

24.

The membrane proteome of Medicago truncatula roots displays qualitative and quantitative changes in response to arbuscular mycorrhizal symbiosis.

Abdallah C, Valot B, Guillier C, Mounier A, Balliau T, Zivy M, van Tuinen D, Renaut J, Wipf D, Dumas-Gaudot E, Recorbet G.

J Proteomics. 2014 Aug 28;108:354-68. doi: 10.1016/j.jprot.2014.05.028. Epub 2014 Jun 10.

PMID:
24925269
25.

Involvement of mitochondrial dysfunction and ER-stress in the physiopathology of equine osteochondritis dissecans (OCD).

Desjardin C, Chat S, Gilles M, Legendre R, Riviere J, Mata X, Balliau T, Esquerré D, Cribiu EP, Betch JM, Schibler L.

Exp Mol Pathol. 2014 Jun;96(3):328-38. doi: 10.1016/j.yexmp.2014.03.004. Epub 2014 Mar 20.

PMID:
24657499
26.

Management and dissemination of MS proteomic data with PROTICdb: example of a quantitative comparison between methods of protein extraction.

Langella O, Valot B, Jacob D, Balliau T, Flores R, Hoogland C, Joets J, Zivy M.

Proteomics. 2013 May;13(9):1457-66. doi: 10.1002/pmic.201200564. Epub 2013 Apr 5.

PMID:
23468041
27.

Linking post-translational modifications and variation of phenotypic traits.

Albertin W, Marullo P, Bely M, Aigle M, Bourgais A, Langella O, Balliau T, Chevret D, Valot B, da Silva T, Dillmann C, de Vienne D, Sicard D.

Mol Cell Proteomics. 2013 Mar;12(3):720-35. doi: 10.1074/mcp.M112.024349. Epub 2012 Dec 27.

28.

Cold stratification and exogenous nitrates entail similar functional proteome adjustments during Arabidopsis seed dormancy release.

Arc E, Chibani K, Grappin P, Jullien M, Godin B, Cueff G, Valot B, Balliau T, Job D, Rajjou L.

J Proteome Res. 2012 Nov 2;11(11):5418-32. doi: 10.1021/pr3006815. Epub 2012 Oct 3.

PMID:
22985405
29.

The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize.

Amiour N, Imbaud S, Clément G, Agier N, Zivy M, Valot B, Balliau T, Armengaud P, Quilleré I, Cañas R, Tercet-Laforgue T, Hirel B.

J Exp Bot. 2012 Sep;63(14):5017-33. doi: 10.1093/jxb/ers186.

PMID:
22936829
30.

Protein expression from zooplankton communities in a metal contaminated NW mediterranean coastal ecosystem.

Jean N, Dumont E, Durrieu G, Balliau T, Jamet JL, Personnic S, Garnier C.

Mar Environ Res. 2012 Sep;80:12-26. doi: 10.1016/j.marenvres.2012.06.004. Epub 2012 Jun 22.

PMID:
22776614
31.

A method for proteomic analysis of equine subchondral bone and epiphyseal cartilage.

Desjardin C, Balliau T, Valot B, Zivy M, Wimel L, Guérin G, Cribiu E, Schibler L.

Proteomics. 2012 Jun;12(11):1870-4. doi: 10.1002/pmic.201100366.

PMID:
22623359
32.

Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections.

Levert M, Zamfir O, Clermont O, Bouvet O, Lespinats S, Hipeaux MC, Branger C, Picard B, Saint-Ruf C, Norel F, Balliau T, Zivy M, Le Nagard H, Cruveiller S, Chane-Woon-Ming B, Nilsson S, Gudelj I, Phan K, Ferenci T, Tenaillon O, Denamur E.

PLoS Pathog. 2010 Sep 30;6(9):e1001125. doi: 10.1371/journal.ppat.1001125. Erratum in: PLoS Pathog. 2011 Jun;7(6). doi:10.1371/annotation/700dcb3b-3475-49a1-9064-d9d070cda7be. Cruvellier, Stéphane[corrected to Cruveiller, Stéphane].

33.

Proteomic analysis of Medicago truncatula root plastids.

Daher Z, Recorbet G, Valot B, Robert F, Balliau T, Potin S, Schoefs B, Dumas-Gaudot E.

Proteomics. 2010 Jun;10(11):2123-37. doi: 10.1002/pmic.200900345.

PMID:
20336678
34.

Differential regulation of gene products in newly synthesized Brassica napus allotetraploids is not related to protein function nor subcellular localization.

Albertin W, Alix K, Balliau T, Brabant P, Davanture M, Malosse C, Valot B, Thiellement H.

BMC Genomics. 2007 Feb 21;8:56.

35.

Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production.

Martin A, Lee J, Kichey T, Gerentes D, Zivy M, Tatout C, Dubois F, Balliau T, Valot B, Davanture M, Tercé-Laforgue T, Quilleré I, Coque M, Gallais A, Gonzalez-Moro MB, Bethencourt L, Habash DZ, Lea PJ, Charcosset A, Perez P, Murigneux A, Sakakibara H, Edwards KJ, Hirel B.

Plant Cell. 2006 Nov;18(11):3252-74. Epub 2006 Nov 30.

36.

Numerous and rapid nonstochastic modifications of gene products in newly synthesized Brassica napus allotetraploids.

Albertin W, Balliau T, Brabant P, Chèvre AM, Eber F, Malosse C, Thiellement H.

Genetics. 2006 Jun;173(2):1101-13. Epub 2006 Apr 19.

37.

Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development.

Sorin C, Negroni L, Balliau T, Corti H, Jacquemot MP, Davanture M, Sandberg G, Zivy M, Bellini C.

Plant Physiol. 2006 Jan;140(1):349-64. Epub 2005 Dec 23.

38.

A two-dimensional proteome map of maize endosperm.

Méchin V, Balliau T, Château-Joubert S, Davanture M, Langella O, Négroni L, Prioul JL, Thévenot C, Zivy M, Damerval C.

Phytochemistry. 2004 Jun;65(11):1609-18.

PMID:
15276456

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