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Items: 1 to 50 of 101

1.

An analytical pipeline for identifying and mapping the integration sites of HIV and other retroviruses.

Wells DW, Guo S, Shao W, Bale MJ, Coffin JM, Hughes SH, Wu X.

BMC Genomics. 2020 Mar 9;21(1):216. doi: 10.1186/s12864-020-6647-4.

2.

Multivariate stabilizing sexual selection and the evolution of male and female genital morphology in the red flour beetle.

House C, Tunstall P, Rapkin J, Bale MJ, Gage M, Del Castillo E, Hunt J.

Evolution. 2019 Dec 30. doi: 10.1111/evo.13912. [Epub ahead of print]

PMID:
31889313
3.

Intact HIV Proviruses Persist in Children Seven to Nine Years after Initiation of Antiretroviral Therapy in the First Year of Life.

Katusiime MG, Halvas EK, Wright I, Joseph K, Bale MJ, Kirby-McCullough B, Engelbrecht S, Shao W, Hu WS, Cotton MF, Mellors JW, Kearney MF, van Zyl GU.

J Virol. 2020 Jan 31;94(4). pii: e01519-19. doi: 10.1128/JVI.01519-19. Print 2020 Jan 31.

PMID:
31776265
4.

Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors.

Patro SC, Brandt LD, Bale MJ, Halvas EK, Joseph KW, Shao W, Wu X, Guo S, Murrell B, Wiegand A, Spindler J, Raley C, Hautman C, Sobolewski M, Fennessey CM, Hu WS, Luke B, Hasson JM, Niyongabo A, Capoferri AA, Keele BF, Milush J, Hoh R, Deeks SG, Maldarelli F, Hughes SH, Coffin JM, Rausch JW, Mellors JW, Kearney MF.

Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):25891-25899. doi: 10.1073/pnas.1910334116. Epub 2019 Nov 27.

PMID:
31776247
5.

HIV Infected T Cells Can Proliferate in vivo Without Inducing Expression of the Integrated Provirus.

Musick A, Spindler J, Boritz E, Pérez L, Crespo-Vélez D, Patro SC, Sobolewski MD, Bale MJ, Reid C, Keele BF, Capoferri A, Shao W, Wiegand A, Simonetti FR, Mellors JW, Hughes SH, Coffin JM, Maldarelli F, Kearney MF.

Front Microbiol. 2019 Oct 1;10:2204. doi: 10.3389/fmicb.2019.02204. eCollection 2019.

6.

Effector memory differentiation increases detection of replication-competent HIV-l in resting CD4+ T cells from virally suppressed individuals.

Wonderlich ER, Subramanian K, Cox B, Wiegand A, Lackman-Smith C, Bale MJ, Stone M, Hoh R, Kearney MF, Maldarelli F, Deeks SG, Busch MP, Ptak RG, Kulpa DA.

PLoS Pathog. 2019 Oct 14;15(10):e1008074. doi: 10.1371/journal.ppat.1008074. eCollection 2019 Oct.

7.

No evidence of ongoing HIV replication or compartmentalization in tissues during combination antiretroviral therapy: Implications for HIV eradication.

Bozzi G, Simonetti FR, Watters SA, Anderson EM, Gouzoulis M, Kearney MF, Rote P, Lange C, Shao W, Gorelick R, Fullmer B, Kumar S, Wank S, Hewitt S, Kleiner DE, Hattori J, Bale MJ, Hill S, Bell J, Rehm C, Grossman Z, Yarchoan R, Uldrick T, Maldarelli F.

Sci Adv. 2019 Sep 25;5(9):eaav2045. doi: 10.1126/sciadv.aav2045. eCollection 2019 Sep.

8.

Linked dual-class HIV resistance mutations are associated with treatment failure.

Boltz VF, Shao W, Bale MJ, Halvas EK, Luke B, McIntyre JA, Schooley RT, Lockman S, Currier JS, Sawe F, Hogg E, Hughes MD, Kearney MF, Coffin JM, Mellors JW.

JCI Insight. 2019 Oct 3;4(19). pii: 130118. doi: 10.1172/jci.insight.130118.

9.

Archaeological assessment reveals Earth's early transformation through land use.

Stephens L, Fuller D, Boivin N, Rick T, Gauthier N, Kay A, Marwick B, Armstrong CG, Barton CM, Denham T, Douglass K, Driver J, Janz L, Roberts P, Rogers JD, Thakar H, Altaweel M, Johnson AL, Sampietro Vattuone MM, Aldenderfer M, Archila S, Artioli G, Bale MT, Beach T, Borrell F, Braje T, Buckland PI, Jiménez Cano NG, Capriles JM, Diez Castillo A, Çilingiroğlu Ç, Negus Cleary M, Conolly J, Coutros PR, Covey RA, Cremaschi M, Crowther A, Der L, di Lernia S, Doershuk JF, Doolittle WE, Edwards KJ, Erlandson JM, Evans D, Fairbairn A, Faulkner P, Feinman G, Fernandes R, Fitzpatrick SM, Fyfe R, Garcea E, Goldstein S, Goodman RC, Dalpoim Guedes J, Herrmann J, Hiscock P, Hommel P, Horsburgh KA, Hritz C, Ives JW, Junno A, Kahn JG, Kaufman B, Kearns C, Kidder TR, Lanoë F, Lawrence D, Lee GA, Levin MJ, Lindskoug HB, López-Sáez JA, Macrae S, Marchant R, Marston JM, McClure S, McCoy MD, Miller AV, Morrison M, Motuzaite Matuzeviciute G, Müller J, Nayak A, Noerwidi S, Peres TM, Peterson CE, Proctor L, Randall AR, Renette S, Robbins Schug G, Ryzewski K, Saini R, Scheinsohn V, Schmidt P, Sebillaud P, Seitsonen O, Simpson IA, Sołtysiak A, Speakman RJ, Spengler RN, Steffen ML, Storozum MJ, Strickland KM, Thompson J, Thurston TL, Ulm S, Ustunkaya MC, Welker MH, West C, Williams PR, Wright DK, Wright N, Zahir M, Zerboni A, Beaudoin E, Munevar Garcia S, Powell J, Thornton A, Kaplan JO, Gaillard MJ, Klein Goldewijk K, Ellis E.

Science. 2019 Aug 30;365(6456):897-902. doi: 10.1126/science.aax1192.

PMID:
31467217
10.

HIV-1 in lymph nodes is maintained by cellular proliferation during antiretroviral therapy.

McManus WR, Bale MJ, Spindler J, Wiegand A, Musick A, Patro SC, Sobolewski MD, Musick VK, Anderson EM, Cyktor JC, Halvas EK, Shao W, Wells D, Wu X, Keele BF, Milush JM, Hoh R, Mellors JW, Hughes SH, Deeks SG, Coffin JM, Kearney MF.

J Clin Invest. 2019 Jul 30;130:4629-4642. doi: 10.1172/JCI126714.

11.

Clones of infected cells arise early in HIV-infected individuals.

Coffin JM, Wells DW, Zerbato JM, Kuruc JD, Guo S, Luke BT, Eron JJ, Bale M, Spindler J, Simonetti FR, Hill S, Kearney MF, Maldarelli F, Wu X, Mellors JW, Hughes SH.

JCI Insight. 2019 Jun 20;4(12). pii: 128432. doi: 10.1172/jci.insight.128432. eCollection 2019 Jun 20.

12.

Phylogenetic inference for the study of within-host HIV-1 dynamics and persistence on antiretroviral therapy.

Capoferri AA, Bale MJ, Simonetti FR, Kearney MF.

Lancet HIV. 2019 May;6(5):e325-e333. doi: 10.1016/S2352-3018(19)30051-7. Epub 2019 Apr 5. Review.

PMID:
30962119
13.

Review: HIV-1 phylogeny during suppressive antiretroviral therapy.

Bale MJ, Kearney MF.

Curr Opin HIV AIDS. 2019 May;14(3):188-193. doi: 10.1097/COH.0000000000000535.

PMID:
30882485
14.

Ongoing HIV Replication During ART Reconsidered.

Kearney MF, Wiegand A, Shao W, McManus WR, Bale MJ, Luke B, Maldarelli F, Mellors JW, Coffin JM.

Open Forum Infect Dis. 2017 Sep 19;4(3):ofx173. doi: 10.1093/ofid/ofx173. eCollection 2017 Summer.

15.

The 100 000 Genomes Project: bringing whole genome sequencing to the NHS.

Turnbull C, Scott RH, Thomas E, Jones L, Murugaesu N, Pretty FB, Halai D, Baple E, Craig C, Hamblin A, Henderson S, Patch C, O'Neill A, Devereau A, Smith K, Martin AR, Sosinsky A, McDonagh EM, Sultana R, Mueller M, Smedley D, Toms A, Dinh L, Fowler T, Bale M, Hubbard T, Rendon A, Hill S, Caulfield MJ; 100 000 Genomes Project.

BMJ. 2018 Apr 24;361:k1687. doi: 10.1136/bmj.k1687. No abstract available. Erratum in: BMJ. 2018 May 2;361:k1952. Devereaux A [corrected to Devereau A].

PMID:
29691228
16.

Cortical Lifelogging: The Posterior Parietal Cortex as Sensory History Buffer.

Bitzidou M, Bale MR, Maravall M.

Neuron. 2018 Apr 18;98(2):249-252. doi: 10.1016/j.neuron.2018.04.002. Review.

17.

HIV evolution and diversity in ART-treated patients.

van Zyl G, Bale MJ, Kearney MF.

Retrovirology. 2018 Jan 30;15(1):14. doi: 10.1186/s12977-018-0395-4. Review.

18.

Organization of sensory feature selectivity in the whisker system.

Bale MR, Maravall M.

Neuroscience. 2018 Jan 1;368:70-80. doi: 10.1016/j.neuroscience.2017.09.014. Epub 2017 Sep 14. Review.

19.

No evidence of HIV replication in children on antiretroviral therapy.

Van Zyl GU, Katusiime MG, Wiegand A, McManus WR, Bale MJ, Halvas EK, Luke B, Boltz VF, Spindler J, Laughton B, Engelbrecht S, Coffin JM, Cotton MF, Shao W, Mellors JW, Kearney MF.

J Clin Invest. 2017 Oct 2;127(10):3827-3834. doi: 10.1172/JCI94582. Epub 2017 Sep 11.

20.

Learning and recognition of tactile temporal sequences by mice and humans.

Bale MR, Bitzidou M, Pitas A, Brebner LS, Khazim L, Anagnou ST, Stevenson CD, Maravall M.

Elife. 2017 Aug 16;6. pii: e27333. doi: 10.7554/eLife.27333.

21.

Mechanisms underlying a thalamocortical transformation during active tactile sensation.

Gutnisky DA, Yu J, Hires SA, To MS, Bale MR, Svoboda K, Golomb D.

PLoS Comput Biol. 2017 Jun 7;13(6):e1005576. doi: 10.1371/journal.pcbi.1005576. eCollection 2017 Jun.

22.

Apparent seroprevalence, isolation and identification of risk factors for brucellosis among dairy cattle in Goa, India.

Pathak AD, Dubal ZB, Karunakaran M, Doijad SP, Raorane AV, Dhuri RB, Bale MA, Chakurkar EB, Kalorey DR, Kurkure NV, Barbuddhe SB.

Comp Immunol Microbiol Infect Dis. 2016 Aug;47:1-6. doi: 10.1016/j.cimid.2016.05.004. Epub 2016 May 25.

PMID:
27477501
23.

Prediction of primary somatosensory neuron activity during active tactile exploration.

Campagner D, Evans MH, Bale MR, Erskine A, Petersen RS.

Elife. 2016 Feb 15;5. pii: e10696. doi: 10.7554/eLife.10696.

24.

Efficient population coding of naturalistic whisker motion in the ventro-posterior medial thalamus based on precise spike timing.

Bale MR, Ince RA, Santagata G, Petersen RS.

Front Neural Circuits. 2015 Sep 25;9:50. doi: 10.3389/fncir.2015.00050. eCollection 2015.

25.

Microsecond-scale timing precision in rodent trigeminal primary afferents.

Bale MR, Campagner D, Erskine A, Petersen RS.

J Neurosci. 2015 Apr 15;35(15):5935-40. doi: 10.1523/JNEUROSCI.3876-14.2015.

26.

Oral administration of morphine versus ibuprofen to manage postfracture pain in children: a randomized trial.

Poonai N, Bhullar G, Lin K, Papini A, Mainprize D, Howard J, Teefy J, Bale M, Langford C, Lim R, Stitt L, Rieder MJ, Ali S.

CMAJ. 2014 Dec 9;186(18):1358-63. doi: 10.1503/cmaj.140907. Epub 2014 Oct 27.

27.

Transformation of adaptation and gain rescaling along the whisker sensory pathway.

Maravall M, Alenda A, Bale MR, Petersen RS.

PLoS One. 2013 Dec 11;8(12):e82418. doi: 10.1371/journal.pone.0082418. eCollection 2013.

28.

Low-dimensional sensory feature representation by trigeminal primary afferents.

Bale MR, Davies K, Freeman OJ, Ince RA, Petersen RS.

J Neurosci. 2013 Jul 17;33(29):12003-12. doi: 10.1523/JNEUROSCI.0925-13.2013.

29.

Comparison of latency and rate coding for the direction of whisker deflection in the subcortical somatosensory pathway.

Storchi R, Bale MR, Biella GE, Petersen RS.

J Neurophysiol. 2012 Oct;108(7):1810-21. doi: 10.1152/jn.00921.2011. Epub 2012 Jul 18.

30.

Stirred, not shaken: genetic structure of the intermediate snail host Oncomelania hupensis robertsoni in an historically endemic schistosomiasis area.

Hauswald AK, Remais JV, Xiao N, Davis GM, Lu D, Bale MJ, Wilke T.

Parasit Vectors. 2011 Oct 26;4:206. doi: 10.1186/1756-3305-4-206.

31.

Is antibiotic prophylaxis necessary for voiding cystourethrography?

Moorthy I, Crook D, Bale M, Cubbon M, Kenney I.

Arch Dis Child. 2010 Apr;95(4):313-4. doi: 10.1136/adc.2009.174169. No abstract available.

PMID:
20335243
32.

Key principles relating to genetic testing and insurance.

Bale M.

Rev Derecho Genoma Hum. 2009 Jan-Jun;(30):203-7.

PMID:
19860348
33.

Transformation in the neural code for whisker deflection direction along the lemniscal pathway.

Bale MR, Petersen RS.

J Neurophysiol. 2009 Nov;102(5):2771-80. doi: 10.1152/jn.00636.2009. Epub 2009 Sep 9.

34.

Diverse and temporally precise kinetic feature selectivity in the VPm thalamic nucleus.

Petersen RS, Brambilla M, Bale MR, Alenda A, Panzeri S, Montemurro MA, Maravall M.

Neuron. 2008 Dec 10;60(5):890-903. doi: 10.1016/j.neuron.2008.09.041.

35.

Does functional strength training of the leg in subacute stroke improve physical performance? A pilot randomized controlled trial.

Bale M, Strand LI.

Clin Rehabil. 2008 Oct-Nov;22(10-11):911-21. doi: 10.1177/0269215508090092.

PMID:
18955423
36.

Role of precise spike timing in coding of dynamic vibrissa stimuli in somatosensory thalamus.

Montemurro MA, Panzeri S, Maravall M, Alenda A, Bale MR, Brambilla M, Petersen RS.

J Neurophysiol. 2007 Oct;98(4):1871-82. Epub 2007 Aug 1.

37.

[Breast feeding in Tromsö before and after the baby-friendly-hospital initiative].

Andreassen M, Bale M, Kaaresen PI, Dahl LB.

Tidsskr Nor Laegeforen. 2001 Nov 10;121(27):3154-8. Norwegian.

PMID:
11876134
38.

Comparison of four methodologies for rapid and cost-effective identification of Candida glabrata.

Fenn JP, Billetdeaux E, Segal H, Skodack-Jones L, Padilla PE, Bale M, Carroll K.

J Clin Microbiol. 1999 Oct;37(10):3387-9.

39.
40.

Vitek GPS card susceptibility testing accuracy using direct inoculation from BACTEC 9240 blood culture bottles.

Howard WJ, Buschelman BJ, Bale MJ, Pfaller MA, Koontz FP, Jones RN.

Diagn Microbiol Infect Dis. 1996 Feb;24(2):109-12.

PMID:
9147906
41.
42.

Quality control guidelines for National Committee for Clinical Laboratory Standards recommended broth macrodilution testing of amphotericin B, fluconazole, and flucytosine.

Pfaller MA, Bale M, Buschelman B, Lancaster M, Espinel-Ingroff A, Rex JH, Rinaldi MG, Cooper CR, McGinnis MR.

J Clin Microbiol. 1995 May;33(5):1104-7.

43.

Efficient detection and long-term persistence of the carriage of methicillin-resistant Staphylococcus aureus.

Sanford MD, Widmer AF, Bale MJ, Jones RN, Wenzel RP.

Clin Infect Dis. 1994 Dec;19(6):1123-8.

PMID:
7888543
45.

Application of the Etest to antimicrobial susceptibility testing of Legionella spp.

Rhomberg PR, Bale MJ, Jones RN.

Diagn Microbiol Infect Dis. 1994 Jul;19(3):175-8.

PMID:
7820999
46.

An experimental model for study of Candida survival and transmission in human volunteers.

Rangel-Frausto MS, Houston AK, Bale MJ, Fu C, Wenzel RP.

Eur J Clin Microbiol Infect Dis. 1994 Jul;13(7):590-5.

PMID:
7805688
47.
48.

Multicenter comparison of a colorimetric microdilution broth method with the reference macrodilution method for in vitro susceptibility testing of yeast isolates.

Pfaller MA, Buschelman B, Bale MJ, Lancaster M, Espinel-Ingroff A, Rex JH, Rinaldi MG.

Diagn Microbiol Infect Dis. 1994 May;19(1):9-13.

PMID:
7956018
50.

Antibacterial features of lubraseptic jelly.

Bale M, Jones RN.

Infect Control Hosp Epidemiol. 1994 Apr;15(4 Pt 1):225. No abstract available.

PMID:
8207187

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