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Items: 32

1.

Population Differences in Susceptibility to Plasmodium relictum in Zebra Finches Taeniopygia guttata.

Hofmeister EK, Balakrishnan CN, Atkinson CT.

Avian Dis. 2018 Dec;62(4):351-354. doi: 10.1637/11823-030518-ResNote.1.

PMID:
31119918
2.

Neural mechanisms of auditory species recognition in birds.

Louder MIM, Lawson S, Lynch KS, Balakrishnan CN, Hauber ME.

Biol Rev Camb Philos Soc. 2019 May 7. doi: 10.1111/brv.12518. [Epub ahead of print]

PMID:
31066222
3.

Understanding the Loss of Maternal Care in Avian Brood Parasites Using Preoptic Area Transcriptome Comparisons in Brood Parasitic and Non-parasitic Blackbirds.

Lynch KS, O'Connell LA, Louder MIM, Balakrishnan CN, Fischer EK.

G3 (Bethesda). 2019 Apr 9;9(4):1075-1084. doi: 10.1534/g3.118.200992.

4.

Gene expression in the social behavior network of the wire-tailed manakin (Pipra filicauda) brain.

Horton BM, Ryder TB, Moore IT, Balakrishnan CN.

Genes Brain Behav. 2019 Feb 12:e12560. doi: 10.1111/gbb.12560. [Epub ahead of print]

PMID:
30756473
5.

Early social experience alters transcriptomic responses to species-specific song stimuli in female songbirds.

Louder MIM, Hauber ME, Balakrishnan CN.

Behav Brain Res. 2018 Jul 16;347:69-76. doi: 10.1016/j.bbr.2018.02.034. Epub 2018 Mar 1.

PMID:
29501507
6.

Mechanisms of Assortative Mating in Speciation with Gene Flow: Connecting Theory and Empirical Research.

Kopp M, Servedio MR, Mendelson TC, Safran RJ, Rodríguez RL, Hauber ME, Scordato EC, Symes LB, Balakrishnan CN, Zonana DM, van Doorn GS.

Am Nat. 2018 Jan;191(1):1-20. doi: 10.1086/694889. Epub 2017 Nov 21.

PMID:
29244561
7.

Transcriptional response to West Nile virus infection in the zebra finch (Taeniopygia guttata).

Newhouse DJ, Hofmeister EK, Balakrishnan CN.

R Soc Open Sci. 2017 Jun 28;4(6):170296. doi: 10.1098/rsos.170296. eCollection 2017 Jun.

8.

Susceptibility and Antibody Response of the Laboratory Model Zebra Finch (Taeniopygia guttata) to West Nile Virus.

Hofmeister EK, Lund M, Shearn-Bochsler V, Balakrishnan CN.

PLoS One. 2017 Jan 3;12(1):e0167876. doi: 10.1371/journal.pone.0167876. eCollection 2017.

9.

Shared neural substrates for song discrimination in parental and parasitic songbirds.

Louder MI, Voss HU, Manna TJ, Carryl SS, London SE, Balakrishnan CN, Hauber ME.

Neurosci Lett. 2016 May 27;622:49-54. doi: 10.1016/j.neulet.2016.04.031. Epub 2016 Apr 16.

PMID:
27095589
10.

Gene Regulatory Evolution During Speciation in a Songbird.

Davidson JH, Balakrishnan CN.

G3 (Bethesda). 2016 May 3;6(5):1357-64. doi: 10.1534/g3.116.027946.

11.

A systems approach to animal communication.

Hebets EA, Barron AB, Balakrishnan CN, Hauber ME, Mason PH, Hoke KL.

Proc Biol Sci. 2016 Mar 16;283(1826):20152889. doi: 10.1098/rspb.2015.2889. Review.

12.

Divergence and Functional Degradation of a Sex Chromosome-like Supergene.

Tuttle EM, Bergland AO, Korody ML, Brewer MS, Newhouse DJ, Minx P, Stager M, Betuel A, Cheviron ZA, Warren WC, Gonser RA, Balakrishnan CN.

Curr Biol. 2016 Feb 8;26(3):344-50. doi: 10.1016/j.cub.2015.11.069. Epub 2016 Jan 21.

13.
14.

Stable recombination hotspots in birds.

Singhal S, Leffler EM, Sannareddy K, Turner I, Venn O, Hooper DM, Strand AI, Li Q, Raney B, Balakrishnan CN, Griffith SC, McVean G, Przeworski M.

Science. 2015 Nov 20;350(6263):928-32. doi: 10.1126/science.aad0843.

15.

Functional genomic analysis and neuroanatomical localization of miR-2954, a song-responsive sex-linked microRNA in the zebra finch.

Lin YC, Balakrishnan CN, Clayton DF.

Front Neurosci. 2014 Dec 16;8:409. doi: 10.3389/fnins.2014.00409. eCollection 2014.

16.

Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior.

Balakrishnan CN, Mukai M, Gonser RA, Wingfield JC, London SE, Tuttle EM, Clayton DF.

PeerJ. 2014 May 22;2:e396. doi: 10.7717/peerj.396. eCollection 2014.

17.

Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome.

Balakrishnan CN, Chapus C, Brewer MS, Clayton DF.

Open Biol. 2013 Sep 4;3(9):130063. doi: 10.1098/rsob.130063.

18.

RNA-seq transcriptome analysis of male and female zebra finch cell lines.

Balakrishnan CN, Lin YC, London SE, Clayton DF.

Genomics. 2012 Dec;100(6):363-9. doi: 10.1016/j.ygeno.2012.08.002. Epub 2012 Aug 21.

19.

Karyotypic polymorphism of the zebra finch Z chromosome.

Itoh Y, Kampf K, Balakrishnan CN, Arnold AP.

Chromosoma. 2011 Jun;120(3):255-64. doi: 10.1007/s00412-010-0308-3. Epub 2011 Jan 11.

20.

Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor.

Janes DE, Chapus C, Gondo Y, Clayton DF, Sinha S, Blatti CA, Organ CL, Fujita MK, Balakrishnan CN, Edwards SV.

Genome Biol Evol. 2011;3:102-13. doi: 10.1093/gbe/evq087. Epub 2010 Dec 23.

21.

Molecular evolution of genes in avian genomes.

Nam K, Mugal C, Nabholz B, Schielzeth H, Wolf JB, Backström N, Künstner A, Balakrishnan CN, Heger A, Ponting CP, Clayton DF, Ellegren H.

Genome Biol. 2010;11(6):R68. doi: 10.1186/gb-2010-11-6-r68. Epub 2010 Jun 23.

22.

The genome of a songbird.

Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Künstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Lin YC, George J, Sweedler J, Southey B, Gunaratne P, Watson M, Nam K, Backström N, Smeds L, Nabholz B, Itoh Y, Whitney O, Pfenning AR, Howard J, Völker M, Skinner BM, Griffin DK, Ye L, McLaren WM, Flicek P, Quesada V, Velasco G, Lopez-Otin C, Puente XS, Olender T, Lancet D, Smit AF, Hubley R, Konkel MK, Walker JA, Batzer MA, Gu W, Pollock DD, Chen L, Cheng Z, Eichler EE, Stapley J, Slate J, Ekblom R, Birkhead T, Burke T, Burt D, Scharff C, Adam I, Richard H, Sultan M, Soldatov A, Lehrach H, Edwards SV, Yang SP, Li X, Graves T, Fulton L, Nelson J, Chinwalla A, Hou S, Mardis ER, Wilson RK.

Nature. 2010 Apr 1;464(7289):757-62. doi: 10.1038/nature08819.

23.

Gene duplication and fragmentation in the zebra finch major histocompatibility complex.

Balakrishnan CN, Ekblom R, Völker M, Westerdahl H, Godinez R, Kotkiewicz H, Burt DW, Graves T, Griffin DK, Warren WC, Edwards SV.

BMC Biol. 2010 Apr 1;8:29. doi: 10.1186/1741-7007-8-29.

24.

Digital gene expression analysis of the zebra finch genome.

Ekblom R, Balakrishnan CN, Burke T, Slate J.

BMC Genomics. 2010 Apr 1;11:219. doi: 10.1186/1471-2164-11-219.

25.

Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.

Künstner A, Wolf JB, Backström N, Whitney O, Balakrishnan CN, Day L, Edwards SV, Janes DE, Schlinger BA, Wilson RK, Jarvis ED, Warren WC, Ellegren H.

Mol Ecol. 2010 Mar;19 Suppl 1:266-76. doi: 10.1111/j.1365-294X.2009.04487.x. Erratum in: Mol Ecol. 2011 Jul;20(13):2871.

26.

Integrating genomes, brain and behavior in the study of songbirds.

Clayton DF, Balakrishnan CN, London SE.

Curr Biol. 2009 Sep 29;19(18):R865-73. doi: 10.1016/j.cub.2009.07.006. Review.

27.

Nucleotide variation, linkage disequilibrium and founder-facilitated speciation in wild populations of the zebra finch (Taeniopygia guttata).

Balakrishnan CN, Edwards SV.

Genetics. 2009 Feb;181(2):645-60. doi: 10.1534/genetics.108.094250. Epub 2008 Dec 1.

28.

Incomplete reproductive isolation following host shift in brood parasitic indigobirds.

Balakrishnan CN, Sefc KM, Sorenson MD.

Proc Biol Sci. 2009 Jan 22;276(1655):219-28. doi: 10.1098/rspb.2008.0733.

30.

Speciation in birds: genes, geography, and sexual selection.

Edwards SV, Kingan SB, Calkins JD, Balakrishnan CN, Jennings WB, Swanson WJ, Sorenson MD.

Proc Natl Acad Sci U S A. 2005 May 3;102 Suppl 1:6550-7. Epub 2005 Apr 25. Review.

31.

Clade-limited colonization in brood parasitic finches (Vidua spp.).

Sorenson MD, Balakrishnan CN, Payne RB.

Syst Biol. 2004 Feb;53(1):140-53.

PMID:
14965909
32.

Phylogeography and conservation genetics of Eld's deer (Cervus eldi).

Balakrishnan CN, Monfort SL, Gaur A, Singh L, Sorenson MD.

Mol Ecol. 2003 Jan;12(1):1-10.

PMID:
12492873

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