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Items: 1 to 50 of 186

1.

Epistasis between antibiotic tolerance, persistence, and resistance mutations.

Levin-Reisman I, Brauner A, Ronin I, Balaban NQ.

Proc Natl Acad Sci U S A. 2019 Jul 16;116(29):14734-14739. doi: 10.1073/pnas.1906169116. Epub 2019 Jul 1.

2.

Publisher Correction: Definitions and guidelines for research on antibiotic persistence.

Balaban NQ, Helaine S, Lewis K, Ackermann M, Aldridge B, Andersson DI, Brynildsen MP, Bumann D, Camilli A, Collins JJ, Dehio C, Fortune S, Ghigo JM, Hardt WD, Harms A, Heinemann M, Hung DT, Jenal U, Levin BR, Michiels J, Storz G, Tan MW, Tenson T, Van Melderen L, Zinkernagel A.

Nat Rev Microbiol. 2019 Jul;17(7):460. doi: 10.1038/s41579-019-0207-4.

PMID:
31036919
3.

Definitions and guidelines for research on antibiotic persistence.

Balaban NQ, Helaine S, Lewis K, Ackermann M, Aldridge B, Andersson DI, Brynildsen MP, Bumann D, Camilli A, Collins JJ, Dehio C, Fortune S, Ghigo JM, Hardt WD, Harms A, Heinemann M, Hung DT, Jenal U, Levin BR, Michiels J, Storz G, Tan MW, Tenson T, Van Melderen L, Zinkernagel A.

Nat Rev Microbiol. 2019 Jul;17(7):441-448. doi: 10.1038/s41579-019-0196-3. Review. Erratum in: Nat Rev Microbiol. 2019 Apr 29;:.

4.

Repression of AXL expression by AP-1/JNK blockage overcomes resistance to PI3Ka therapy.

Badarni M, Prasad M, Balaban N, Zorea J, Yegodayev KM, Joshua BZ, Dinur AB, Grénman R, Rotblat B, Cohen L, Elkabets M.

JCI Insight. 2019 Mar 12;5. pii: 125341. doi: 10.1172/jci.insight.125341.

5.

Learning from Noise: How Observing Stochasticity May Aid Microbiology.

Amir A, Balaban NQ.

Trends Microbiol. 2018 Apr;26(4):376-385. doi: 10.1016/j.tim.2018.02.003. Epub 2018 Mar 9. Review.

PMID:
29526404
6.

Tackling Antibiotic Resistance with Systems-Level Perspective.

Liu J, Gefen O, Balaban NQ.

Cell Syst. 2017 Dec 27;5(6):546-548. doi: 10.1016/j.cels.2017.12.002.

7.

An Experimental Framework for Quantifying Bacterial Tolerance.

Brauner A, Shoresh N, Fridman O, Balaban NQ.

Biophys J. 2017 Jun 20;112(12):2664-2671. doi: 10.1016/j.bpj.2017.05.014.

8.

Antibiotic tolerance facilitates the evolution of resistance.

Levin-Reisman I, Ronin I, Gefen O, Braniss I, Shoresh N, Balaban NQ.

Science. 2017 Feb 24;355(6327):826-830. doi: 10.1126/science.aaj2191. Epub 2017 Feb 9.

PMID:
28183996
9.

A long-term epigenetic memory switch controls bacterial virulence bimodality.

Ronin I, Katsowich N, Rosenshine I, Balaban NQ.

Elife. 2017 Feb 7;6. pii: e19599. doi: 10.7554/eLife.19599.

10.

TDtest: easy detection of bacterial tolerance and persistence in clinical isolates by a modified disk-diffusion assay.

Gefen O, Chekol B, Strahilevitz J, Balaban NQ.

Sci Rep. 2017 Feb 1;7:41284. doi: 10.1038/srep41284.

11.

Persistence to anti-cancer treatments in the stationary to proliferating transition.

Pearl Mizrahi S, Gefen O, Simon I, Balaban NQ.

Cell Cycle. 2016 Dec 16;15(24):3442-3453. doi: 10.1080/15384101.2016.1248006. Epub 2016 Nov 1.

12.

Features of Gene Expression of Bacillus pumilus Metalloendopeptidase.

Rudakova NL, Sabirova AR, Balaban NP, Tikhonova AO, Sharipova MR.

Biochemistry (Mosc). 2016 Aug;81(8):884-91. doi: 10.1134/S0006297916080095.

PMID:
27677556
13.

Structural Characteristics and Catalytic Mechanism of Bacillus β-Propeller Phytases.

Balaban NP, Suleimanova AD, Valeeva LR, Shakirov EV, Sharipova MR.

Biochemistry (Mosc). 2016 Aug;81(8):785-93. doi: 10.1134/S0006297916080010. Review.

PMID:
27677548
14.

Microbial degradation of the brominated flame retardant TBNPA by groundwater bacteria: laboratory and field study.

Balaban N, Bernstein A, Gelman F, Ronen Z.

Chemosphere. 2016 Aug;156:367-373. doi: 10.1016/j.chemosphere.2016.04.127. Epub 2016 May 14.

PMID:
27183339
15.

Distinguishing between resistance, tolerance and persistence to antibiotic treatment.

Brauner A, Fridman O, Gefen O, Balaban NQ.

Nat Rev Microbiol. 2016 Apr;14(5):320-30. doi: 10.1038/nrmicro.2016.34. Review.

PMID:
27080241
16.

Distinguishing between stochasticity and determinism: Examples from cell cycle duration variability.

Pearl Mizrahi S, Sandler O, Lande-Diner L, Balaban NQ, Simon I.

Bioessays. 2016 Jan;38(1):8-13. doi: 10.1002/bies.201500113. Epub 2015 Dec 2. Review.

PMID:
26628302
17.

High-quality draft genome sequence of a new phytase-producing microorganism Pantoea sp. 3.5.1.

Suleimanova AD, Toymentseva AA, Boulygina EA, Kazakov SV, Mardanova AM, Balaban NP, Sharipova MR.

Stand Genomic Sci. 2015 Nov 11;10:95. doi: 10.1186/s40793-015-0093-y. eCollection 2015.

18.

Quantitative Measurements of Type I and Type II Persisters Using ScanLag.

Levin-Reisman I, Balaban NQ.

Methods Mol Biol. 2016;1333:75-81. doi: 10.1007/978-1-4939-2854-5_7.

PMID:
26468101
19.

Novel Glucose-1-Phosphatase with High Phytase Activity and Unusual Metal Ion Activation from Soil Bacterium Pantoea sp. Strain 3.5.1.

Suleimanova AD, Beinhauer A, Valeeva LR, Chastukhina IB, Balaban NP, Shakirov EV, Greiner R, Sharipova MR.

Appl Environ Microbiol. 2015 Oct;81(19):6790-9. doi: 10.1128/AEM.01384-15. Epub 2015 Jul 24.

20.

Lineage correlations of single cell division time as a probe of cell-cycle dynamics.

Sandler O, Mizrahi SP, Weiss N, Agam O, Simon I, Balaban NQ.

Nature. 2015 Mar 26;519(7544):468-71. doi: 10.1038/nature14318. Epub 2015 Mar 11.

PMID:
25762143
21.

Application of dual carbon-bromine isotope analysis for investigating abiotic transformations of tribromoneopentyl alcohol (TBNPA).

Kozell A, Yecheskel Y, Balaban N, Dror I, Halicz L, Ronen Z, Gelman F.

Environ Sci Technol. 2015 Apr 7;49(7):4433-40. doi: 10.1021/es504887d. Epub 2015 Mar 11.

PMID:
25723316
22.

Systematic identification and quantification of phase variation in commensal and pathogenic Escherichia coli.

Goldberg A, Fridman O, Ronin I, Balaban NQ.

Genome Med. 2014 Nov 28;6(11):112. doi: 10.1186/s13073-014-0112-4. eCollection 2014.

23.

Bacterial enzymes effectively digest Alzheimer's β-amyloid peptide.

Danilova YV, Shagimardanova EI, Margulis AB, Toymentseva AA, Balaban NP, Rudakova NL, Rizvanov AA, Sharipova MR, Palotás A.

Brain Res Bull. 2014 Sep;108:113-7. doi: 10.1016/j.brainresbull.2014.08.009. Epub 2014 Sep 26.

PMID:
25262575
24.

ScanLag: high-throughput quantification of colony growth and lag time.

Levin-Reisman I, Fridman O, Balaban NQ.

J Vis Exp. 2014 Jul 15;(89). doi: 10.3791/51456.

25.

Optimization of lag time underlies antibiotic tolerance in evolved bacterial populations.

Fridman O, Goldberg A, Ronin I, Shoresh N, Balaban NQ.

Nature. 2014 Sep 18;513(7518):418-21. doi: 10.1038/nature13469. Epub 2014 Jun 25.

PMID:
25043002
26.

Draft Genome Sequence of Bacillus pumilus 7P, Isolated from the Soil of the Tatarstan Republic, Russia.

Shagimardanova EI, Toymentseva AA, Balaban NP, Mardanova AM, Danilova YV, Gusev OA, Kostryukova E, Karpova I, Manolov A, Alexeev D, Sharipova MR.

Genome Announc. 2014 Jun 12;2(3). pii: e00599-14. doi: 10.1128/genomeA.00599-14.

27.

[Isolation and characterisation of a new bacillar phytase].

Akhmetova AI, Nyamsuren Ch, Balaban NP, Sharipova MR.

Bioorg Khim. 2013 Jul-Aug;39(4):430-6. Russian.

PMID:
24707724
28.

Direct observation of single stationary-phase bacteria reveals a surprisingly long period of constant protein production activity.

Gefen O, Fridman O, Ronin I, Balaban NQ.

Proc Natl Acad Sci U S A. 2014 Jan 7;111(1):556-61. doi: 10.1073/pnas.1314114111. Epub 2013 Dec 16.

29.

HipA-mediated antibiotic persistence via phosphorylation of the glutamyl-tRNA-synthetase.

Kaspy I, Rotem E, Weiss N, Ronin I, Balaban NQ, Glaser G.

Nat Commun. 2013;4:3001. doi: 10.1038/ncomms4001.

PMID:
24343429
30.

A problem of persistence: still more questions than answers?

Balaban NQ, Gerdes K, Lewis K, McKinney JD.

Nat Rev Microbiol. 2013 Aug;11(8):587-91. Review.

PMID:
24020075
31.

[Structural properties and functional importance of metzincin metalloproteinases].

Balaban NP, Rudakova NL, Sharipova MR.

Bioorg Khim. 2013 Sep-Oct;39(5):552-7. Russian.

PMID:
25702412
32.

Stochasticity, bistability and the wisdom of crowds: a model for associative learning in genetic regulatory networks.

Sorek M, Balaban NQ, Loewenstein Y.

PLoS Comput Biol. 2013;9(8):e1003179. doi: 10.1371/journal.pcbi.1003179. Epub 2013 Aug 22.

33.

[Properties of Bacillus pumilus subtilisin like proteinase secreted from recombinant strain on different growth stages].

Balaban NP, Danilova IuV, Shamsutdinov TR, Mardanova AM, Cheremin AM, Rudenskaia GN, Sharipova MR.

Bioorg Khim. 2013 Jan-Feb;39(1):46-54. Russian.

PMID:
23844506
34.

[The novel Adams-like microbial metalloendopeptidase].

Balaban NP, Rudakova NL, Sabirova AR, Valeeva LR, Sharipova MR.

Bioorg Khim. 2012 Jul-Aug;38(4):439-48. Russian.

PMID:
23189558
35.

[Subtilisin like protease secreted in Bacillus pumilus KMM 62 on different growth stages].

Mardanova AM, Malikova LA, Balaban NP, Zamaliutdinova NM, Sharipova MR.

Bioorg Khim. 2012 Mar-Apr;38(2):234-41. Russian.

PMID:
22792728
36.

Comparison of the surface and core bacteria in tonsillar and adenoid tissue with Beta-lactamase production.

Taylan I, Ozcan I, Mumcuoğlu I, Baran I, Murat Özcan K, Akdoğan O, Selcuk A, Balaban N, Dere H.

Indian J Otolaryngol Head Neck Surg. 2011 Jul;63(3):223-8. doi: 10.1007/s12070-011-0265-z. Epub 2011 May 7.

37.

Structural and functional characteristics and properties of metzincins.

Balaban NP, Rudakova NL, Sharipova MR.

Biochemistry (Mosc). 2012 Feb;77(2):119-27. doi: 10.1134/S0006297912020010. Review.

PMID:
22348470
38.

Whack-an-E. coli with the morbidostat.

Fridman O, Goldberg A, Balaban NQ.

Genome Biol. 2012 Jan 27;13(1):140. doi: 10.1186/gb-2012-13-1-140.

39.

Persistence: mechanisms for triggering and enhancing phenotypic variability.

Balaban NQ.

Curr Opin Genet Dev. 2011 Dec;21(6):768-75. doi: 10.1016/j.gde.2011.10.001. Epub 2011 Nov 1. Review.

PMID:
22051606
40.

[New Phylogenetic Position Of Bacillus Intermedius 3-19 Strain].

Sharipova MR, Toĭmentseva AA, Sabirova AR, Mukhametzianova AD, Akhmetova AI, Mardanova AM, Balaban NP.

Mikrobiologiia. 2011 May-Jun;80(3):424-6. Russian. No abstract available.

PMID:
21861381
41.

Vaccine development for the prevention of staphylococcal mastitis in dairy cows.

Leitner G, Krifucks O, Kiran MD, Balaban N.

Vet Immunol Immunopathol. 2011 Jul 15;142(1-2):25-35. doi: 10.1016/j.vetimm.2011.03.023. Epub 2011 Apr 8.

PMID:
21524801
42.

Evaluation of DNA extraction kits for molecular diagnosis of human Blastocystis subtypes from fecal samples.

Yoshikawa H, Dogruman-Al F, Turk S, Kustimur S, Balaban N, Sultan N.

Parasitol Res. 2011 Oct;109(4):1045-50. doi: 10.1007/s00436-011-2342-3. Epub 2011 Apr 16. Erratum in: Parasitol Res. 2012 Feb;110(2):1063. Dogruman-Ai, Funda [corrected to Dogruman-Al, Funda].

PMID:
21499752
43.

Characteristics of a novel secreted zinc-dependent endopeptidase of Bacillus intermedius.

Rudakova NL, Balaban NP, Danilova YV, Rudenskaya GN, Sharipova MR.

Biochemistry (Mosc). 2010 Oct;75(10):1294-301.

PMID:
21166648
44.

Isolation of agr quorum sensing autoinducers.

Balaban N.

Methods Mol Biol. 2011;692:47-59. doi: 10.1007/978-1-60761-971-0_4.

PMID:
21031303
45.

YhgC protects Bacillus anthracis from oxidative stress.

Kiran MD, Bala S, Hirshberg M, Balaban N.

Int J Artif Organs. 2010 Sep;33(9):590-607.

PMID:
20963726
46.

Molecular mechanisms of RIP, an effective inhibitor of chronic infections.

Lopez-Leban F, Kiran MD, Wolcott R, Balaban N.

Int J Artif Organs. 2010 Sep;33(9):582-9.

PMID:
20963725
47.

A novel secreted metzincin metalloproteinase from Bacillus intermedius.

Sabirova AR, Rudakova NL, Balaban NP, Ilyinskaya ON, Demidyuk IV, Kostrov SV, Rudenskaya GN, Sharipova MR.

FEBS Lett. 2010 Nov 5;584(21):4419-25. doi: 10.1016/j.febslet.2010.09.049. Epub 2010 Oct 8.

48.

YhgC protects Bacillus anthracis from oxidative stress.

Kiran MD, Bala S, Hirshberg M, Balaban N.

Int J Artif Organs. 2010 Oct 5. pii: 18D04EBA-A86B-4596-943C-0482FA2FADCB. [Epub ahead of print]

PMID:
20925037
49.

Automated imaging with ScanLag reveals previously undetectable bacterial growth phenotypes.

Levin-Reisman I, Gefen O, Fridman O, Ronin I, Shwa D, Sheftel H, Balaban NQ.

Nat Methods. 2010 Sep;7(9):737-9. doi: 10.1038/nmeth.1485. Epub 2010 Aug 1.

PMID:
20676109
50.

Regulation of phenotypic variability by a threshold-based mechanism underlies bacterial persistence.

Rotem E, Loinger A, Ronin I, Levin-Reisman I, Gabay C, Shoresh N, Biham O, Balaban NQ.

Proc Natl Acad Sci U S A. 2010 Jul 13;107(28):12541-6. doi: 10.1073/pnas.1004333107. Epub 2010 Jun 28.

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