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Rectal Organoids Enable Personalized Treatment of Cystic Fibrosis.

Berkers G, van Mourik P, Vonk AM, Kruisselbrink E, Dekkers JF, de Winter-de Groot KM, Arets HGM, Marck-van der Wilt REP, Dijkema JS, Vanderschuren MM, Houwen RHJ, Heijerman HGM, van de Graaf EA, Elias SG, Majoor CJ, Koppelman GH, Roukema J, Bakker M, Janssens HM, van der Meer R, Vries RGJ, Clevers HC, de Jonge HR, Beekman JM, van der Ent CK.

Cell Rep. 2019 Feb 12;26(7):1701-1708.e3. doi: 10.1016/j.celrep.2019.01.068.


Cognitive outcomes in meningioma patients undergoing surgery: individual changes over time and predictors of late cognitive functioning.

Rijnen SJM, Meskal I, Bakker M, De Baene W, Rutten GM, Gehring K, Sitskoorn MM.

Neuro Oncol. 2019 Feb 7. doi: 10.1093/neuonc/noz039. [Epub ahead of print]


Microbial correlates of Fusarium load and deoxynivalenol content in individual wheat kernels.

Bakker MG, McCormick S.

Phytopathology. 2019 Feb 4. doi: 10.1094/PHYTO-08-18-0310-R. [Epub ahead of print]


Data-Sharing Requires Script-Sharing.

Bakker M.

Ground Water. 2019 Jan 29. doi: 10.1111/gwat.12852. [Epub ahead of print] No abstract available.


Introducing new vaccines in low- and middle-income countries: challenges and approaches.

Guignard A, Praet N, Jusot V, Bakker M, Baril L.

Expert Rev Vaccines. 2019 Feb;18(2):119-131. doi: 10.1080/14760584.2019.1574224. Epub 2019 Feb 11.


Ganciclovir Therapeutic Drug Monitoring: A Case Series.

Märtson AG, Touw D, Damman K, Bakker M, Lansink-Hartgring AO, van der Werf T, Knoester M, Alffenaar JC.

Ther Drug Monit. 2019 Jan 25. doi: 10.1097/FTD.0000000000000598. [Epub ahead of print]


Posaconazole trough concentrations are not influenced by inflammation: A prospective study.

Märtson AG, Veringa A, Bakker M, van den Heuvel ER, Touw DJ, van der Werf TS, Span LFR, C Alffenaar JW.

Int J Antimicrob Agents. 2019 Jan 11. pii: S0924-8579(19)30006-8. doi: 10.1016/j.ijantimicag.2019.01.006. [Epub ahead of print]


The clinical impact of pseudomonas aeruginosa eradication in bronchiectasis in a Dutch referral center.

Pieters A, Bakker M, Hoek RAS, Altenburg J, van Westreenen M, Aerts JGJV, van der Eerden MM.

Eur Respir J. 2019 Jan 11. pii: 1802081. doi: 10.1183/13993003.02081-2018. [Epub ahead of print] No abstract available.


Extra-pulmonary tuberculosis: A retrospective study of patients in Accra, Ghana.

Ohene SA, Bakker MI, Ojo J, Toonstra A, Awudi D, Klatser P.

PLoS One. 2019 Jan 9;14(1):e0209650. doi: 10.1371/journal.pone.0209650. eCollection 2019.


Explaining the larger seed bank of an invasive shrub in non-native versus native environments by differences in seed predation and plant size.

Bakker MR, Udo N, Atlan A, Gire C, Gonzalez M, Graham D, Leckie A, Milin S, Niollet S, Xue J, Delerue F.

Ann Bot. 2018 Dec 24. doi: 10.1093/aob/mcy229. [Epub ahead of print]


Bacterial endophyte antagonism toward a fungal pathogen in vitro does not predict protection in live plant tissue.

Whitaker BK, Bakker MG.

FEMS Microbiol Ecol. 2019 Feb 1;95(2). doi: 10.1093/femsec/fiy237.


Are Edentulousness, Oral Health Problems and Poor Health-Related Quality of Life Associated with Malnutrition in Community-Dwelling Elderly (Aged 75 Years and Over)? A Cross-Sectional Study.

Bakker MH, Vissink A, Spoorenberg SLW, Jager-Wittenaar H, Wynia K, Visser A.

Nutrients. 2018 Dec 12;10(12). pii: E1965. doi: 10.3390/nu10121965.


Computer-aided detection of fasciculations and other movements in muscle with ultrasound: Development and clinical application.

Gijsbertse K, Bakker M, Sprengers A, Wijntjes J, Lassche S, Verdonschot N, de Korte CL, van Alfen N.

Clin Neurophysiol. 2018 Dec;129(12):2567-2576. doi: 10.1016/j.clinph.2018.09.022. Epub 2018 Oct 27.


Type 1 interferon-inducible gene expression in QuantiFERON Gold TB-positive uveitis: A tool to stratify a high versus low risk of active tuberculosis?

La Distia Nora R, Sitompul R, Bakker M, Versnel MA, Swagemakers SMA, van der Spek PJ, Susiyanti M, Edwar L, Sjamsoe S, Singh G, Handayani RD, Rothova A, van Hagen PM, Dik WA.

PLoS One. 2018 Oct 18;13(10):e0206073. doi: 10.1371/journal.pone.0206073. eCollection 2018.


Accurate Description of Low-Lying Excited States in a Series of Photoreactive Clusters [Os3(CO)10(α-diimine)] by DFT Calculations.

Hartl F, Bakker MJ, Santos VF, Costa PJ, Calhorda MJ.

Inorg Chem. 2018 Sep 17;57(18):11704-11716. doi: 10.1021/acs.inorgchem.8b01847. Epub 2018 Sep 6.


[Within the limits of the law? Compulsory isolation and compulsory treatment for tuberculosis].

Bakker M, Plomp E.

Ned Tijdschr Geneeskd. 2018 Aug 3;162. pii: D2898. Dutch.


Gender equality in 4- to 5-year-old preschoolers' early numerical competencies.

Bakker M, Torbeyns J, Wijns N, Verschaffel L, De Smedt B.

Dev Sci. 2019 Jan;22(1):e12718. doi: 10.1111/desc.12718. Epub 2018 Sep 2.


Development and validation of a predictive ecological model for TB prevalence.

Alba S, Rood E, Bakker MI, Straetemans M, Glaziou P, Sismanidis C.

Int J Epidemiol. 2018 Oct 1;47(5):1645-1657. doi: 10.1093/ije/dyy174.


Longitudinal Continuity in Understanding and Production of Giving-Related Behavior From Infancy to Childhood.

Juvrud J, Bakker M, Kaduk K, DeValk JM, Gredebäck G, Kenward B.

Child Dev. 2018 Aug 13. doi: 10.1111/cdev.13131. [Epub ahead of print]


Active tracked intramyocardial catheter injections for regenerative therapy with real-time MR guidance: feasibility in the porcine heart.

Tseng CCS, Wenker S, Bakker MH, Kraaijeveld AO, Dankers PYW, Seevinck PR, Smink J, Kimmel S, van Slochteren FJ, Chamuleau SAJ.

EuroIntervention. 2018 Aug 7. pii: EIJ-D-17-01081. doi: 10.4244/EIJ-D-17-01081. [Epub ahead of print] No abstract available.


Considerations on Effective Feedback in Computerized Speech Training for Dysarthric Speakers.

Bakker M, Beijer L, Rietveld T.

Telemed J E Health. 2018 Aug 3. doi: 10.1089/tmj.2018.0050. [Epub ahead of print]


Assessing the influences of ecological restoration on perceptions of cultural ecosystem services by residents of agricultural landscapes of western China.

Dou Y, Zhen L, Yu X, Bakker M, Carsjens GJ, Xue Z.

Sci Total Environ. 2019 Jan 1;646:685-695. doi: 10.1016/j.scitotenv.2018.07.205. Epub 2018 Jul 27.


Bulk soil bacterial community structure and function respond to long-term organic and conventional agricultural management.

Bakker MG, Looft T, Alt DP, Delate K, Cambardella CA.

Can J Microbiol. 2018 Dec;64(12):901-914. doi: 10.1139/cjm-2018-0134. Epub 2018 Jul 30.


Testosterone to oestradiol ratio reflects systemic and plaque inflammation and predicts future cardiovascular events in men with severe atherosclerosis.

van Koeverden ID, de Bakker M, Haitjema S, van der Laan SW, de Vries JPM, Hoefer IE, de Borst GJ, Pasterkamp G, den Ruijter HM.

Cardiovasc Res. 2019 Feb 1;115(2):453-462. doi: 10.1093/cvr/cvy188.


The association of air pollution with congenital anomalies: An exploratory study in the northern Netherlands.

Salavati N, Strak M, Burgerhof JGM, de Walle HEK, Erwich JJHM, Bakker MK.

Int J Hyg Environ Health. 2018 Aug;221(7):1061-1067. doi: 10.1016/j.ijheh.2018.07.008. Epub 2018 Jul 20.


Soil evaporation and organic matter turnover in the Sub-Taiga and Forest-Steppe of southwest Siberia.

Kayler ZE, Brédoire F, McMillan H, Barsukov PA, Rusalimova O, Nikitich P, Bakker MR, Zeller B, Fontaine S, Derrien D.

Sci Rep. 2018 Jul 19;8(1):10904. doi: 10.1038/s41598-018-28977-8.


Challenges for Migrant and Cross-Border Populations With Diabetes Mellitus at Mae Tao Clinic in the Mae Sot-Myawaddy Border Region of Thailand and Myanmar.

Naing AL, Bakker M.

Int J Low Extrem Wounds. 2018 Sep;17(3):195-196. doi: 10.1177/1534734618788928. Epub 2018 Jul 16.


One-second coherence for a single electron spin coupled to a multi-qubit nuclear-spin environment.

Abobeih MH, Cramer J, Bakker MA, Kalb N, Markham M, Twitchen DJ, Taminiau TH.

Nat Commun. 2018 Jun 29;9(1):2552. doi: 10.1038/s41467-018-04916-z.


Metformin exposure in first trimester of pregnancy and risk of all or specific congenital anomalies: exploratory case-control study.

Given JE, Loane M, Garne E, Addor MC, Bakker M, Bertaut-Nativel B, Gatt M, Klungsoyr K, Lelong N, Morgan M, Neville AJ, Pierini A, Rissmann A, Dolk H.

BMJ. 2018 Jun 25;361:k2477. doi: 10.1136/bmj.k2477.


Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver.

Wymant C, Blanquart F, Golubchik T, Gall A, Bakker M, Bezemer D, Croucher NJ, Hall M, Hillebregt M, Ong SH, Ratmann O, Albert J, Bannert N, Fellay J, Fransen K, Gourlay A, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos R, Laeyendecker O, Liitsola K, Meyer L, Porter K, Ristola M, van Sighem A, Berkhout B, Cornelissen M, Kellam P, Reiss P, Fraser C; BEEHIVE Collaboration.

Virus Evol. 2018 May 18;4(1):vey007. doi: 10.1093/ve/vey007. eCollection 2018 Jan.


Controlled Release of RNAi Molecules by Tunable Supramolecular Hydrogel Carriers.

Bakker MH, van Rooij E, Dankers PYW.

Chem Asian J. 2018 Nov 16;13(22):3501-3508. doi: 10.1002/asia.201800582. Epub 2018 Jun 25.


Cholesterol Modification of an Anticancer Drug for Efficient Incorporation into a Supramolecular Hydrogel System.

Bakker MH, Grillaud M, Wu DJ, Fransen PKH, de Hingh IH, Dankers PYW.

Macromol Rapid Commun. 2018 Sep;39(17):e1800007. doi: 10.1002/marc.201800007. Epub 2018 May 28.


Reasons for (non)participation in supplemental population-based MRI breast screening for women with extremely dense breasts.

de Lange SV, Bakker MF, Monninkhof EM, Peeters PHM, de Koekkoek-Doll PK, Mann RM, Rutten MJCM, Bisschops RHC, Veltman J, Duvivier KM, Lobbes MBI, de Koning HJ, Karssemeijer N, Pijnappel RM, Veldhuis WB, van Gils CH.

Clin Radiol. 2018 Aug;73(8):759.e1-759.e9. doi: 10.1016/j.crad.2018.04.002. Epub 2018 Jun 18.


Managing for Multifunctionality in Perennial Grain Crops.

Ryan MR, Crews TE, Culman SW, DeHaan LR, Hayes RC, Jungers JM, Bakker MG.

Bioscience. 2018 Apr 1;68(4):294-304. doi: 10.1093/biosci/biy014. Epub 2018 Mar 21.


MRI Visualization of Injectable Ureidopyrimidinone Hydrogelators by Supramolecular Contrast Agent Labeling.

Bakker MH, Tseng CCS, Keizer HM, Seevinck PR, Janssen HM, Van Slochteren FJ, Chamuleau SAJ, Dankers PYW.

Adv Healthc Mater. 2018 Jun;7(11):e1701139. doi: 10.1002/adhm.201701139. Epub 2018 Apr 15.


The evolution of subtype B HIV-1 tat in the Netherlands during 1985-2012.

van der Kuyl AC, Vink M, Zorgdrager F, Bakker M, Wymant C, Hall M, Gall A, Blanquart F, Berkhout B, Fraser C, Cornelissen M; BEEHIVE Collaboration.

Virus Res. 2018 May 2;250:51-64. doi: 10.1016/j.virusres.2018.04.008. Epub 2018 Apr 11.


Mapping the Relationship between Glycosyl Acceptor Reactivity and Glycosylation Stereoselectivity.

van der Vorm S, van Hengst JMA, Bakker M, Overkleeft HS, van der Marel GA, Codée JDC.

Angew Chem Int Ed Engl. 2018 Jul 2;57(27):8240-8244. doi: 10.1002/anie.201802899. Epub 2018 Apr 26.


Risk of dipeptidyl peptidase-4 (DPP-4) inhibitors on site-specific cancer: A systematic review and meta-analysis.

Overbeek JA, Bakker M, van der Heijden AAWA, van Herk-Sukel MPP, Herings RMC, Nijpels G.

Diabetes Metab Res Rev. 2018 Jul;34(5):e3004. doi: 10.1002/dmrr.3004. Epub 2018 Apr 26. Review.


Springtime Peaks and Christmas Troughs: A National Longitudinal Population-Based Study into Suicide Incidence Time Trends in the Netherlands.

Hofstra E, Elfeddali I, Bakker M, de Jong JJ, van Nieuwenhuizen C, van der Feltz-Cornelis CM.

Front Psychiatry. 2018 Feb 26;9:45. doi: 10.3389/fpsyt.2018.00045. eCollection 2018.


Yield of tuberculosis among household contacts of tuberculosis patients in Accra, Ghana.

Ohene SA, Bonsu F, Hanson-Nortey NN, Sackey A, Danso S, Afutu F, Klatser P, Bakker M.

Infect Dis Poverty. 2018 Feb 27;7(1):14. doi: 10.1186/s40249-018-0396-5.


Insulin analogues use in pregnancy among women with pregestational diabetes mellitus and risk of congenital anomaly: a retrospective population-based cohort study.

Wang H, Wender-Ozegowska E, Garne E, Morgan M, Loane M, Morris JK, Bakker MK, Gatt M, de Walle H, Jordan S, Materna-Kiryluk A, Nelen V, Thys G, Wiesel A, Dolk H, de Jong-van den Berg LTW.

BMJ Open. 2018 Feb 24;8(2):e014972. doi: 10.1136/bmjopen-2016-014972.


A fungal mock community control for amplicon sequencing experiments.

Bakker MG.

Mol Ecol Resour. 2018 May;18(3):541-556. doi: 10.1111/1755-0998.12760. Epub 2018 Feb 17.


High STAP1 expression in DUX4-rearranged cases is not suitable as therapeutic target in pediatric B-cell precursor acute lymphoblastic leukemia.

Steeghs EMP, Bakker M, Hoogkamer AQ, Boer JM, Hartman QJ, Stalpers F, Escherich G, de Haas V, de Groot-Kruseman HA, Pieters R, den Boer ML.

Sci Rep. 2018 Jan 12;8(1):693. doi: 10.1038/s41598-017-17704-4.


CD44 is required for the pathogenesis of experimental crescentic glomerulonephritis and collapsing focal segmental glomerulosclerosis.

Eymael J, Sharma S, Loeven MA, Wetzels JF, Mooren F, Florquin S, Deegens JK, Willemsen BK, Sharma V, van Kuppevelt TH, Bakker MA, Ostendorf T, Moeller MJ, Dijkman HB, Smeets B, van der Vlag J.

Kidney Int. 2018 Mar;93(3):626-642. doi: 10.1016/j.kint.2017.09.020. Epub 2017 Dec 21.


[Medicaments and oral healthcare 6. Oral side effects of -medications commonly used by older people].

Bakker MH, Vissink A, de Baat C, Visser A.

Ned Tijdschr Tandheelkd. 2017 Dec;124(12):645-652. doi: 10.5177/ntvt.2017.12.17167. Review. Dutch.


Poor cognitive ageing: Vulnerabilities, mechanisms and the impact of nutritional interventions.

Miquel S, Champ C, Day J, Aarts E, Bahr BA, Bakker M, Bánáti D, Calabrese V, Cederholm T, Cryan J, Dye L, Farrimond JA, Korosi A, Layé S, Maudsley S, Milenkovic D, Mohajeri MH, Sijben J, Solomon A, Spencer JPE, Thuret S, Vanden Berghe W, Vauzour D, Vellas B, Wesnes K, Willatts P, Wittenberg R, Geurts L.

Ageing Res Rev. 2018 Mar;42:40-55. doi: 10.1016/j.arr.2017.12.004. Epub 2017 Dec 15. Review.


Prenatal diagnosis of urinary tract anomalies, a cohort study in the Northern Netherlands.

Bakker MK, Bergman JEH, Fleurke-Rozema H, Streefland E, Gracchi V, Bilardo CM, De Walle HEK.

Prenat Diagn. 2018 Jan;38(2):130-134. doi: 10.1002/pd.5200. Epub 2018 Jan 4.


Beta-Blocker Use in Pregnancy and Risk of Specific Congenital Anomalies: A European Case-Malformed Control Study.

Bergman JEH, Lutke LR, Gans ROB, Addor MC, Barisic I, Cavero-Carbonell C, Garne E, Gatt M, Klungsoyr K, Lelong N, Lynch C, Mokoroa O, Nelen V, Neville AJ, Pierini A, Randrianaivo H, Rissmann A, Tucker D, Wiesel A, Dolk H, Loane M, Bakker MK.

Drug Saf. 2018 Apr;41(4):415-427. doi: 10.1007/s40264-017-0627-x.


Provider initiated tuberculosis case finding in outpatient departments of health care facilities in Ghana: yield by screening strategy and target group.

Ohene SA, Bonsu F, Hanson-Nortey NN, Toonstra A, Sackey A, Lonnroth K, Uplekar M, Danso S, Mensah G, Afutu F, Klatser P, Bakker M.

BMC Infect Dis. 2017 Dec 1;17(1):739. doi: 10.1186/s12879-017-2843-5.


Tuberculosis and other causes of uveitis in Indonesia.

La Distia Nora R, Sitompul R, Bakker M, Susiyanti M, Edwar L, Sjamsoe S, Singh G, van Hagen MP, Rothova A.

Eye (Lond). 2018 Mar;32(3):546-554. doi: 10.1038/eye.2017.231. Epub 2017 Nov 3.


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