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Items: 1 to 50 of 288

1.

CoA-dependent activation of mitochondrial acyl carrier protein links four neurodegenerative diseases.

Lambrechts RA, Schepers H, Yu Y, van der Zwaag M, Autio KJ, Vieira-Lara MA, Bakker BM, Tijssen MA, Hayflick SJ, Grzeschik NA, Sibon OC.

EMBO Mol Med. 2019 Nov 7:e10488. doi: 10.15252/emmm.201910488. [Epub ahead of print]

2.

Accelerating the Shuttling in Hydrogen-Bonded Rotaxanes: Active Role of the Axle and the End Station.

Kumpulainen T, Panman MR, Bakker BH, Hilbers MF, Woutersen S, Brouwer AM.

J Am Chem Soc. 2019 Nov 7. doi: 10.1021/jacs.9b10005. [Epub ahead of print]

PMID:
31697078
3.

Variants of the hyoid-larynx complex, with implications for forensic science and consequence for the diagnosis of Eagle's syndrome.

de Bakker BS, de Bakker HM, Soerdjbalie-Maikoe V, Dikkers FG.

Sci Rep. 2019 Nov 4;9(1):15950. doi: 10.1038/s41598-019-52476-z.

4.

The impact of using three-dimensional digital models of human embryos in the biomedical curriculum.

Chekrouni N, Kleipool RP, de Bakker BS.

Ann Anat. 2019 Oct 19;227:151430. doi: 10.1016/j.aanat.2019.151430. [Epub ahead of print]

5.

Transcriptome analysis suggests a compensatory role of the cofactors coenzyme A and NAD+ in medium-chain acyl-CoA dehydrogenase knockout mice.

Martines AMF, Gerding A, Stolle S, Vieira-Lara MA, Wolters JC, Jurdzinski A, Bongiovanni L, de Bruin A, van der Vlies P, van der Vries G, Bloks VW, Derks TGJ, Reijngoud DJ, Bakker BM.

Sci Rep. 2019 Oct 10;9(1):14539. doi: 10.1038/s41598-019-50758-0.

6.

Premature mitotic entry induced by ATR inhibition potentiates olaparib inhibition-mediated genomic instability, inflammatory signaling, and cytotoxicity in BRCA2-deficient cancer cells.

Schoonen PM, Kok YP, Wierenga E, Bakker B, Foijer F, Spierings DCJ, van Vugt MATM.

Mol Oncol. 2019 Nov;13(11):2422-2440. doi: 10.1002/1878-0261.12573. Epub 2019 Oct 21.

7.

Targeted Proteomics to Study Mitochondrial Biology.

Wolters JC, Permentier HP, Bakker BM, Bischoff R.

Adv Exp Med Biol. 2019;1158:101-117. doi: 10.1007/978-981-13-8367-0_7.

PMID:
31452138
8.

Renal temperature reduction progressively favors mitochondrial ROS production over respiration in hypothermic kidney preservation.

Hendriks KDW, Brüggenwirth IMA, Maassen H, Gerding A, Bakker B, Porte RJ, Henning RH, Leuvenink HGD.

J Transl Med. 2019 Aug 13;17(1):265. doi: 10.1186/s12967-019-2013-1.

9.

Conventional X-ray as an additional tool in the analysis of fatal neck trauma.

de Bakker HM, de Bakker BS.

Forensic Sci Med Pathol. 2019 Jun 26. doi: 10.1007/s12024-019-00132-3. [Epub ahead of print] No abstract available.

PMID:
31243693
10.

Ongoing chromosomal instability and karyotype evolution in human colorectal cancer organoids.

Bolhaqueiro ACF, Ponsioen B, Bakker B, Klaasen SJ, Kucukkose E, van Jaarsveld RH, Vivié J, Verlaan-Klink I, Hami N, Spierings DCJ, Sasaki N, Dutta D, Boj SF, Vries RGJ, Lansdorp PM, van de Wetering M, van Oudenaarden A, Clevers H, Kranenburg O, Foijer F, Snippert HJG, Kops GJPL.

Nat Genet. 2019 May;51(5):824-834. doi: 10.1038/s41588-019-0399-6. Epub 2019 Apr 29.

PMID:
31036964
11.

Association of rs10490924 in ARMS2/HTRA1 with age-related macular degeneration in the Pakistani population.

Ayub H, Shafique S, Azam A, Muslim I, Qazi NA, Akhtar F, Khan MA, Ayub A, Bashir S, Bakker B, Ahmed S, Azam M, den Hollander AI, Qamar R.

Ann Hum Genet. 2019 Jul;83(4):285-290. doi: 10.1111/ahg.12311. Epub 2019 Mar 20.

PMID:
30895599
12.

DNA Replication Vulnerabilities Render Ovarian Cancer Cells Sensitive to Poly(ADP-Ribose) Glycohydrolase Inhibitors.

Pillay N, Tighe A, Nelson L, Littler S, Coulson-Gilmer C, Bah N, Golder A, Bakker B, Spierings DCJ, James DI, Smith KM, Jordan AM, Morgan RD, Ogilvie DJ, Foijer F, Jackson DA, Taylor SS.

Cancer Cell. 2019 Mar 18;35(3):519-533.e8. doi: 10.1016/j.ccell.2019.02.004.

13.

Running wheel access fails to resolve impaired sustainable health in mice feeding a high fat sucrose diet.

Reijne AC, Talarovicova A, Ciapaite J, Bruggink JE, Bleeker A, Groen AK, Reijngoud DJ, Bakker BM, van Dijk G.

Aging (Albany NY). 2019 Mar 11;11(5):1564-1579. doi: 10.18632/aging.101857.

14.

The effects of free condom distribution on HIV and other sexually transmitted infections in men who have sex with men.

Bom RJM, van der Linden K, Matser A, Poulin N, Schim van der Loeff MF, Bakker BHW, van Boven TF.

BMC Infect Dis. 2019 Mar 4;19(1):222. doi: 10.1186/s12879-019-3839-0.

15.

Liberals lecture, conservatives communicate: Analyzing complexity and ideology in 381,609 political speeches.

Schoonvelde M, Brosius A, Schumacher G, Bakker BN.

PLoS One. 2019 Feb 6;14(2):e0208450. doi: 10.1371/journal.pone.0208450. eCollection 2019.

16.

The Pronephros; a Fresh Perspective.

de Bakker BS, van den Hoff MJB, Vize PD, Oostra RJ.

Integr Comp Biol. 2019 Jul 1;59(1):29-47. doi: 10.1093/icb/icz001.

PMID:
30649320
17.

A Proinflammatory Gut Microbiota Increases Systemic Inflammation and Accelerates Atherosclerosis.

Brandsma E, Kloosterhuis NJ, Koster M, Dekker DC, Gijbels MJJ, van der Velden S, Ríos-Morales M, van Faassen MJR, Loreti MG, de Bruin A, Fu J, Kuipers F, Bakker BM, Westerterp M, de Winther MPJ, Hofker MH, van de Sluis B, Koonen DPY.

Circ Res. 2019 Jan 4;124(1):94-100. doi: 10.1161/CIRCRESAHA.118.313234.

18.

[A toddler with a rare complication of scarlet fever].

Smit MP, Abdullahi NS, Bakker B, van den Elzen APM.

Ned Tijdschr Geneeskd. 2018 Nov 26;162. pii: D3081. Dutch.

PMID:
30500124
19.

On the Enigma of the Human Neurenteric Canal.

Rulle A, Tsikolia N, de Bakker B, Drummer C, Behr R, Viebahn C.

Cells Tissues Organs. 2018;205(5-6):256-278. doi: 10.1159/000493276. Epub 2018 Nov 27.

20.

Quantification of Aneuploidy in Mammalian Systems.

van den Bos H, Bakker B, Taudt A, Guryev V, Colomé-Tatché M, Lansdorp PM, Foijer F, Spierings DCJ.

Methods Mol Biol. 2019;1896:159-190. doi: 10.1007/978-1-4939-8931-7_15.

PMID:
30474848
21.

Cofactors revisited - Predicting the impact of flavoprotein-related diseases on a genome scale.

Wegrzyn AB, Stolle S, Rienksma RA, Martins Dos Santos VAP, Bakker BM, Suarez-Diez M.

Biochim Biophys Acta Mol Basis Dis. 2019 Feb 1;1865(2):360-370. doi: 10.1016/j.bbadis.2018.10.021. Epub 2018 Oct 29.

22.

The development of the human notochord.

de Bree K, de Bakker BS, Oostra RJ.

PLoS One. 2018 Oct 22;13(10):e0205752. doi: 10.1371/journal.pone.0205752. eCollection 2018.

23.

The p38α Stress Kinase Suppresses Aneuploidy Tolerance by Inhibiting Hif-1α.

Simões-Sousa S, Littler S, Thompson SL, Minshall P, Whalley H, Bakker B, Belkot K, Moralli D, Bronder D, Tighe A, Spierings DCJ, Bah N, Graham J, Nelson L, Green CM, Foijer F, Townsend PA, Taylor SS.

Cell Rep. 2018 Oct 16;25(3):749-760.e6. doi: 10.1016/j.celrep.2018.09.060.

24.

The value of post-mortem computed tomography of burned victims in a forensic setting.

de Bakker HM, Roelandt GHJ, Soerdjbalie-Maikoe V, van Rijn RR, de Bakker BS.

Eur Radiol. 2019 Apr;29(4):1912-1921. doi: 10.1007/s00330-018-5731-5. Epub 2018 Oct 1.

25.

Genetic screening for macular dystrophies in patients clinically diagnosed with dry age-related macular degeneration.

Kersten E, Geerlings MJ, Pauper M, Corominas J, Bakker B, Altay L, Fauser S, de Jong EK, Hoyng CB, den Hollander AI.

Clin Genet. 2018 Dec;94(6):569-574. doi: 10.1111/cge.13447. Epub 2018 Oct 15.

26.

Role of the Complement System in Chronic Central Serous Chorioretinopathy: A Genome-Wide Association Study.

Schellevis RL, van Dijk EHC, Breukink MB, Altay L, Bakker B, Koeleman BPC, Kiemeney LA, Swinkels DW, Keunen JEE, Fauser S, Hoyng CB, den Hollander AI, Boon CJF, de Jong EK.

JAMA Ophthalmol. 2018 Oct 1;136(10):1128-1136. doi: 10.1001/jamaophthalmol.2018.3190.

27.

Mutations in IRS4 are associated with central hypothyroidism.

Heinen CA, de Vries EM, Alders M, Bikker H, Zwaveling-Soonawala N, van den Akker ELT, Bakker B, Hoorweg-Nijman G, Roelfsema F, Hennekam RC, Boelen A, van Trotsenburg ASP, Fliers E.

J Med Genet. 2018 Oct;55(10):693-700. doi: 10.1136/jmedgenet-2017-105113. Epub 2018 Jul 30.

28.

FoxM1 repression during human aging leads to mitotic decline and aneuploidy-driven full senescence.

Macedo JC, Vaz S, Bakker B, Ribeiro R, Bakker PL, Escandell JM, Ferreira MG, Medema R, Foijer F, Logarinho E.

Nat Commun. 2018 Jul 19;9(1):2834. doi: 10.1038/s41467-018-05258-6.

29.

Is mid-upper arm circumference in Dutch children useful in identifying obesity?

Talma H, van Dommelen P, Schweizer JJ, Bakker B, Kist-van Holthe JE, Chinapaw JMM, Hirasing RA.

Arch Dis Child. 2019 Feb;104(2):159-165. doi: 10.1136/archdischild-2017-313528. Epub 2018 Jul 7.

PMID:
29982172
30.

Non-random Mis-segregation of Human Chromosomes.

Worrall JT, Tamura N, Mazzagatti A, Shaikh N, van Lingen T, Bakker B, Spierings DCJ, Vladimirou E, Foijer F, McClelland SE.

Cell Rep. 2018 Jun 12;23(11):3366-3380. doi: 10.1016/j.celrep.2018.05.047.

31.

Functional analyses of rare genetic variants in complement component C9 identified in patients with age-related macular degeneration.

Kremlitzka M, Geerlings MJ, de Jong S, Bakker B, Nilsson SC, Fauser S, Hoyng CB, de Jong EK, den Hollander AI, Blom AM.

Hum Mol Genet. 2018 Aug 1;27(15):2678-2688. doi: 10.1093/hmg/ddy178.

PMID:
29767720
32.

Hitherto unknown detailed muscle anatomy in an 8-week-old embryo.

Warmbrunn MV, de Bakker BS, Hagoort J, Alefs-de Bakker PB, Oostra RJ.

J Anat. 2018 Aug;233(2):243-254. doi: 10.1111/joa.12819. Epub 2018 May 3.

33.

Whole-Exome Sequencing in Age-Related Macular Degeneration Identifies Rare Variants in COL8A1, a Component of Bruch's Membrane.

Corominas J, Colijn JM, Geerlings MJ, Pauper M, Bakker B, Amin N, Lores Motta L, Kersten E, Garanto A, Verlouw JAM, van Rooij JGJ, Kraaij R, de Jong PTVM, Hofman A, Vingerling JR, Schick T, Fauser S, de Jong EK, van Duijn CM, Hoyng CB, Klaver CCW, den Hollander AI.

Ophthalmology. 2018 Sep;125(9):1433-1443. doi: 10.1016/j.ophtha.2018.03.040. Epub 2018 Apr 26.

34.

STRENDA DB: enabling the validation and sharing of enzyme kinetics data.

Swainston N, Baici A, Bakker BM, Cornish-Bowden A, Fitzpatrick PF, Halling P, Leyh TS, O'Donovan C, Raushel FM, Reschel U, Rohwer JM, Schnell S, Schomburg D, Tipton KF, Tsai MD, Westerhoff HV, Wittig U, Wohlgemuth R, Kettner C.

FEBS J. 2018 Jun;285(12):2193-2204. doi: 10.1111/febs.14427. Epub 2018 Mar 23.

35.

Postmortem radiological case series of acetabular fractures after fatal aviation accidents.

de Bakker HM, Tijsterman M, Kubat B, Soerdjbalie-Maikoe V, van Rijn RR, de Bakker BS.

Forensic Sci Med Pathol. 2018 Mar;14(1):62-69. doi: 10.1007/s12024-018-9946-1. Epub 2018 Feb 5.

36.

Iron status and its association with HbA1c levels in Dutch children with diabetes mellitus type 1.

Akkermans MD, Mieke Houdijk ECA, Bakker B, Boers AC, van der Kaay DCM, de Vries MC, Claire Woltering M, Mul D, van Goudoever JB, Brus F.

Eur J Pediatr. 2018 Apr;177(4):603-610. doi: 10.1007/s00431-018-3104-3. Epub 2018 Feb 2.

PMID:
29396628
37.

Transient two-dimensional vibrational spectroscopy of an operating molecular machine.

Panman MR, van Dijk CN, Huerta-Viga A, Sanders HJ, Bakker BH, Leigh DA, Brouwer AM, Buma WJ, Woutersen S.

Nat Commun. 2017 Dec 20;8(1):2206. doi: 10.1038/s41467-017-02278-6.

38.

The development of the human hyoid-larynx complex revisited.

de Bakker BS, de Bakker HM, Soerdjbalie-Maikoe V, Dikkers FG.

Laryngoscope. 2018 Aug;128(8):1829-1834. doi: 10.1002/lary.26987. Epub 2017 Dec 8.

PMID:
29219191
39.

Running-wheel activity delays mitochondrial respiratory flux decline in aging mouse muscle via a post-transcriptional mechanism.

Stolle S, Ciapaite J, Reijne AC, Talarovicova A, Wolters JC, Aguirre-Gamboa R, van der Vlies P, de Lange K, Neerincx PB, van der Vries G, Deelen P, Swertz MA, Li Y, Bischoff R, Permentier HP, Horvatovitch PL, Groen AK, van Dijk G, Reijngoud DJ, Bakker BM.

Aging Cell. 2018 Feb;17(1). doi: 10.1111/acel.12700. Epub 2017 Nov 9.

40.

Male apoE*3-Leiden.CETP mice on high-fat high-cholesterol diet exhibit a biphasic dyslipidemic response, mimicking the changes in plasma lipids observed through life in men.

Paalvast Y, Gerding A, Wang Y, Bloks VW, van Dijk TH, Havinga R, Willems van Dijk K, Rensen PCN, Bakker BM, Kuivenhoven JA, Groen AK.

Physiol Rep. 2017 Oct;5(19). pii: e13376. doi: 10.14814/phy2.13376. Epub 2017 Oct 16. Erratum in: Physiol Rep. 2018 Mar;6(6):e13608.

41.

Single-cell sequencing to quantify genomic integrity in cancer.

van den Bos H, Bakker B, Spierings DCJ, Lansdorp PM, Foijer F.

Int J Biochem Cell Biol. 2018 Jan;94:146-150. doi: 10.1016/j.biocel.2017.09.016. Epub 2017 Sep 23. Review.

PMID:
28951245
42.

Waterijs na een operatie vermindert opiaatbehoefte.

van de Donk T, Bakker B, Postulart B, Renckens K, Snak L, Kleinloog D, van Velzen M, Dahan A, van Dasselaar N, Niesters M.

Ned Tijdschr Geneeskd. 2017;161:D1467. Dutch.

PMID:
28831931
43.

Single-site neural tube closure in human embryos revisited.

de Bakker BS, Driessen S, Boukens BJD, van den Hoff MJB, Oostra RJ.

Clin Anat. 2017 Oct;30(7):988-999. doi: 10.1002/ca.22977. Epub 2017 Aug 29. Review.

PMID:
28795440
44.

Oxygen-Dependent Lipid Profiles of Three-Dimensional Cultured Human Chondrocytes Revealed by MALDI-MSI.

Bakker B, Eijkel GB, Heeren RMA, Karperien M, Post JN, Cillero-Pastor B.

Anal Chem. 2017 Sep 5;89(17):9438-9444. doi: 10.1021/acs.analchem.7b02265. Epub 2017 Aug 14.

45.

p53 Prohibits Propagation of Chromosome Segregation Errors that Produce Structural Aneuploidies.

Soto M, Raaijmakers JA, Bakker B, Spierings DCJ, Lansdorp PM, Foijer F, Medema RH.

Cell Rep. 2017 Jun 20;19(12):2423-2431. doi: 10.1016/j.celrep.2017.05.055.

46.

The first-trimester fetal central nervous system: a novel ultrasonographic perspective.

Shah H, Al-Memar M, de Bakker B, Fourie H, Lees C, Bourne T.

Am J Obstet Gynecol. 2017 Aug;217(2):220-221. doi: 10.1016/j.ajog.2017.05.053. Epub 2017 May 31. No abstract available.

47.

The vanishing duodenal polyp: mesenteric invagination presenting as duodenal pseudopolyp.

de Bakker BS, Phoa SSKS, Kara M, Al-Eryani S, Gielen ME, Ponsioen CIJ, de Bakker HM, van Gulik TM.

BMJ Case Rep. 2017 May 13;2017. pii: bcr-2016-214998. doi: 10.1136/bcr-2016-214998.

48.

The promiscuous enzyme medium-chain 3-keto-acyl-CoA thiolase triggers a vicious cycle in fatty-acid beta-oxidation.

Martines AMF, van Eunen K, Reijngoud DJ, Bakker BM.

PLoS Comput Biol. 2017 Apr 3;13(4):e1005461. doi: 10.1371/journal.pcbi.1005461. eCollection 2017 Apr.

49.

Deletion of the MAD2L1 spindle assembly checkpoint gene is tolerated in mouse models of acute T-cell lymphoma and hepatocellular carcinoma.

Foijer F, Albacker LA, Bakker B, Spierings DC, Yue Y, Xie SZ, Davis S, Lutum-Jehle A, Takemoto D, Hare B, Furey B, Bronson RT, Lansdorp PM, Bradley A, Sorger PK.

Elife. 2017 Mar 20;6. pii: e20873. doi: 10.7554/eLife.20873.

50.

SK2 channels regulate mitochondrial respiration and mitochondrial Ca2+ uptake.

Honrath B, Matschke L, Meyer T, Magerhans L, Perocchi F, Ganjam GK, Zischka H, Krasel C, Gerding A, Bakker BM, Bünemann M, Strack S, Decher N, Culmsee C, Dolga AM.

Cell Death Differ. 2017 May;24(5):761-773. doi: 10.1038/cdd.2017.2. Epub 2017 Mar 10.

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