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Items: 36

1.

The NLR-Annotator tool enables annotation of the intracellular immune receptor repertoire.

Steuernagel B, Witek K, Krattinger SG, Ramirez-Gonzalez RH, Schoonbeek HJ, Yu G, Baggs E, Witek A, Yadav I, Krasileva KV, Jones JD, Uauy C, Keller B, Ridout CJ, Wulff BB.

Plant Physiol. 2020 Mar 17. pii: pp.01273.2019. doi: 10.1104/pp.19.01273. [Epub ahead of print]

2.

Drought soil legacy overrides maternal effects on plant growth.

De Long JR, Semchenko M, Pritchard WJ, Cordero I, Fry EL, Jackson BG, Kurnosova K, Ostle NJ, Johnson D, Baggs EM, Bardgett RD.

Funct Ecol. 2019 Aug;33(8):1400-1410. doi: 10.1111/1365-2435.13341. Epub 2019 Apr 29.

3.

Culture in the world shapes culture in the head (and vice versa).

Baggs E, Raja V, Anderson ML.

Behav Brain Sci. 2019 Sep 12;42:e172. doi: 10.1017/S0140525X19001079.

PMID:
31511106
4.

Relationships between plant traits, soil properties and carbon fluxes differ between monocultures and mixed communities in temperate grassland.

De Long JR, Jackson BG, Wilkinson A, Pritchard WJ, Oakley S, Mason KE, Stephan JG, Ostle NJ, Johnson D, Baggs EM, Bardgett RD.

J Ecol. 2019 Jul;107(4):1704-1719. doi: 10.1111/1365-2745.13160. Epub 2019 Mar 25.

5.

Drought decreases incorporation of recent plant photosynthate into soil food webs regardless of their trophic complexity.

Chomel M, Lavallee JM, Alvarez-Segura N, de Castro F, Rhymes JM, Caruso T, de Vries FT, Baggs EM, Emmerson MC, Bardgett RD, Johnson D.

Glob Chang Biol. 2019 Oct;25(10):3549-3561. doi: 10.1111/gcb.14754. Epub 2019 Aug 10.

6.

Fungal diversity regulates plant-soil feedbacks in temperate grassland.

Semchenko M, Leff JW, Lozano YM, Saar S, Davison J, Wilkinson A, Jackson BG, Pritchard WJ, De Long JR, Oakley S, Mason KE, Ostle NJ, Baggs EM, Johnson D, Fierer N, Bardgett RD.

Sci Adv. 2018 Nov 28;4(11):eaau4578. doi: 10.1126/sciadv.aau4578. eCollection 2018 Nov.

7.

Methodological bias associated with soluble protein recovery from soil.

Greenfield LM, Hill PW, Paterson E, Baggs EM, Jones DL.

Sci Rep. 2018 Jul 25;8(1):11186. doi: 10.1038/s41598-018-29559-4.

8.

Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits.

Leff JW, Bardgett RD, Wilkinson A, Jackson BG, Pritchard WJ, De Long JR, Oakley S, Mason KE, Ostle NJ, Johnson D, Baggs EM, Fierer N.

ISME J. 2018 Jun;12(7):1794-1805. doi: 10.1038/s41396-018-0089-x. Epub 2018 Mar 9.

9.

Variable response of nirK and nirS containing denitrifier communities to long-term pH manipulation and cultivation.

Herold MB, Giles ME, Alexander CJ, Baggs EM, Daniell TJ.

FEMS Microbiol Lett. 2018 Apr 1;365(7). doi: 10.1093/femsle/fny035.

PMID:
29471521
10.

Dominant integration locus drives continuous diversification of plant immune receptors with exogenous domain fusions.

Bailey PC, Schudoma C, Jackson W, Baggs E, Dagdas G, Haerty W, Moscou M, Krasileva KV.

Genome Biol. 2018 Feb 19;19(1):23. doi: 10.1186/s13059-018-1392-6.

11.

"Hot spots" of N and C impact nitric oxide, nitrous oxide and nitrogen gas emissions from a UK grassland soil.

Loick N, Dixon E, Abalos D, Vallejo A, Matthews P, McGeough K, Watson C, Baggs EM, Cardenas LM.

Geoderma. 2017 Nov 1;305:336-345. doi: 10.1016/j.geoderma.2017.06.007.

12.

NLR diversity, helpers and integrated domains: making sense of the NLR IDentity.

Baggs E, Dagdas G, Krasileva KV.

Curr Opin Plant Biol. 2017 Aug;38:59-67. doi: 10.1016/j.pbi.2017.04.012. Epub 2017 May 8. Review.

13.

Plant exudates improve the mechanical conditions for root penetration through compacted soils.

Oleghe E, Naveed M, Baggs EM, Hallett PD.

Plant Soil. 2017;421(1):19-30. doi: 10.1007/s11104-017-3424-5. Epub 2017 Sep 25.

14.

Generation of Recombinant Polioviruses Harboring RNA Affinity Tags in the 5' and 3' Noncoding Regions of Genomic RNAs.

Flather D, Cathcart AL, Cruz C, Baggs E, Ngo T, Gershon PD, Semler BL.

Viruses. 2016 Feb 4;8(2). pii: E39. doi: 10.3390/v8020039.

15.

Does canopy nitrogen uptake enhance carbon sequestration by trees?

Nair RK, Perks MP, Weatherall A, Baggs EM, Mencuccini M.

Glob Chang Biol. 2016 Feb;22(2):875-88. doi: 10.1111/gcb.13096. Epub 2015 Dec 14.

16.

Substrate induced denitrification over or under estimates shifts in soil N₂/N₂O ratios.

Morley NJ, Richardson DJ, Baggs EM.

PLoS One. 2014 Sep 22;9(9):e108144. doi: 10.1371/journal.pone.0108144. eCollection 2014.

17.

Nitrous oxide emissions from soils: how well do we understand the processes and their controls?

Butterbach-Bahl K, Baggs EM, Dannenmann M, Kiese R, Zechmeister-Boltenstern S.

Philos Trans R Soc Lond B Biol Sci. 2013 May 27;368(1621):20130122. doi: 10.1098/rstb.2013.0122. Print 2013 Jul 5. Review.

18.

Evidence of microbial regulation of biogeochemical cycles from a study on methane flux and land use change.

Nazaries L, Pan Y, Bodrossy L, Baggs EM, Millard P, Murrell JC, Singh BK.

Appl Environ Microbiol. 2013 Jul;79(13):4031-40. doi: 10.1128/AEM.00095-13. Epub 2013 Apr 26.

19.

Soil nitrate reducing processes - drivers, mechanisms for spatial variation, and significance for nitrous oxide production.

Giles M, Morley N, Baggs EM, Daniell TJ.

Front Microbiol. 2012 Dec 18;3:407. doi: 10.3389/fmicb.2012.00407. eCollection 2012.

20.

Soil mineral N retention and N(2) O emissions following combined application of (15) N-labelled fertiliser and weed residues.

García-Ruiz R, Gómez-Muñoz B, Hatch DJ, Bol R, Baggs EM.

Rapid Commun Mass Spectrom. 2012 Oct 30;26(20):2379-85. doi: 10.1002/rcm.6254.

PMID:
22976203
21.

The impact of copper, nitrate and carbon status on the emission of nitrous oxide by two species of bacteria with biochemically distinct denitrification pathways.

Felgate H, Giannopoulos G, Sullivan MJ, Gates AJ, Clarke TA, Baggs E, Rowley G, Richardson DJ.

Environ Microbiol. 2012 Jul;14(7):1788-800. doi: 10.1111/j.1462-2920.2012.02789.x. Epub 2012 May 30.

PMID:
22642644
22.

Biological sources and sinks of nitrous oxide and strategies to mitigate emissions.

Thomson AJ, Giannopoulos G, Pretty J, Baggs EM, Richardson DJ.

Philos Trans R Soc Lond B Biol Sci. 2012 May 5;367(1593):1157-68. doi: 10.1098/rstb.2011.0415. Review.

23.

Nitrous oxide production in soil isolates of nitrate-ammonifying bacteria.

Stremińska MA, Felgate H, Rowley G, Richardson DJ, Baggs EM.

Environ Microbiol Rep. 2012 Feb;4(1):66-71. doi: 10.1111/j.1758-2229.2011.00302.x. Epub 2011 Oct 31.

PMID:
23757231
24.

Resolving the contributions of the membrane-bound and periplasmic nitrate reductase systems to nitric oxide and nitrous oxide production in Salmonella enterica serovar Typhimurium.

Rowley G, Hensen D, Felgate H, Arkenberg A, Appia-Ayme C, Prior K, Harrington C, Field SJ, Butt JN, Baggs E, Richardson DJ.

Biochem J. 2012 Jan 15;441(2):755-62. doi: 10.1042/BJ20110971.

PMID:
22039967
25.

Response of methanotrophic communities to afforestation and reforestation in New Zealand.

Nazaries L, Tate KR, Ross DJ, Singh J, Dando J, Saggar S, Baggs EM, Millard P, Murrell JC, Singh BK.

ISME J. 2011 Nov;5(11):1832-6. doi: 10.1038/ismej.2011.62. Epub 2011 May 19.

26.

Peromyscus maniculatus, a possible reservoir host of Borrelia garinii from the Gannet Islands off Newfoundland and Labrador.

Baggs EM, Stack SH, Finney-Crawley JR, Simon NP.

J Parasitol. 2011 Oct;97(5):792-4. doi: 10.1645/GE-2548.1. Epub 2011 Mar 17.

PMID:
21506809
27.

Plant influence on nitrification.

Skiba MW, George TS, Baggs EM, Daniell TJ.

Biochem Soc Trans. 2011 Jan;39(1):275-8. doi: 10.1042/BST0390275.

PMID:
21265787
28.

Nitrous oxide production by the ectomycorrhizal fungi Paxillus involutus and Tylospora fibrillosa.

Prendergast-Miller MT, Baggs EM, Johnson D.

FEMS Microbiol Lett. 2011 Mar;316(1):31-5. doi: 10.1111/j.1574-6968.2010.02187.x. Epub 2011 Jan 14.

29.

Endoparasites of the coyote (Canis latrans), a recent migrant to insular newfoundland.

Bridger KE, Baggs EM, Finney-Crawley J.

J Wildl Dis. 2009 Oct;45(4):1221-6.

PMID:
19901402
30.

Mycorrhizas and biomass crops: opportunities for future sustainable development.

Rooney DC, Killham K, Bending GD, Baggs E, Weih M, Hodge A.

Trends Plant Sci. 2009 Oct;14(10):542-9. doi: 10.1016/j.tplants.2009.08.004. Epub 2009 Sep 10. Review.

PMID:
19748301
31.

Mitigating release of the potent greenhouse gas N(2)O from the nitrogen cycle - could enzymic regulation hold the key?

Richardson D, Felgate H, Watmough N, Thomson A, Baggs E.

Trends Biotechnol. 2009 Jul;27(7):388-97. doi: 10.1016/j.tibtech.2009.03.009. Epub 2009 Jun 3. Review.

PMID:
19497629
32.

Production of NO, N2O and N2 by extracted soil bacteria, regulation by NO2(-) and O2 concentrations.

Morley N, Baggs EM, Dörsch P, Bakken L.

FEMS Microbiol Ecol. 2008 Jul;65(1):102-12. doi: 10.1111/j.1574-6941.2008.00495.x. Epub 2008 May 6.

33.

A review of stable isotope techniques for N2O source partitioning in soils: recent progress, remaining challenges and future considerations.

Baggs EM.

Rapid Commun Mass Spectrom. 2008 Jun;22(11):1664-72. doi: 10.1002/rcm.3456. Review.

PMID:
18435506
34.

Phylogeny of nitrite reductase (nirK) and nitric oxide reductase (norB) genes from Nitrosospira species isolated from soil.

Garbeva P, Baggs EM, Prosser JI.

FEMS Microbiol Lett. 2007 Jan;266(1):83-9. Epub 2006 Nov 13.

35.

Nitrosospira spp. can produce nitrous oxide via a nitrifier denitrification pathway.

Shaw LJ, Nicol GW, Smith Z, Fear J, Prosser JI, Baggs EM.

Environ Microbiol. 2006 Feb;8(2):214-22.

PMID:
16423010
36.

A novel dual-isotope labelling method for distinguishing between soil sources of N2O.

Wrage N, van Groenigen JW, Oenema O, Baggs EM.

Rapid Commun Mass Spectrom. 2005;19(22):3298-306.

PMID:
16220527

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