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Items: 7

1.

Bacterial salivary microbiome associates with asthma among african american children and young adults.

Espuela-Ortiz A, Lorenzo-Diaz F, Baez-Ortega A, Eng C, Hernandez-Pacheco N, Oh SS, Lenoir M, Burchard EG, Flores C, Pino-Yanes M.

Pediatr Pulmonol. 2019 Sep 9. doi: 10.1002/ppul.24504. [Epub ahead of print]

PMID:
31496123
2.

Somatic evolution and global expansion of an ancient transmissible cancer lineage.

Baez-Ortega A, Gori K, Strakova A, Allen JL, Allum KM, Bansse-Issa L, Bhutia TN, Bisson JL, Briceño C, Castillo Domracheva A, Corrigan AM, Cran HR, Crawford JT, Davis E, de Castro KF, B de Nardi A, de Vos AP, Delgadillo Keenan L, Donelan EM, Espinoza Huerta AR, Faramade IA, Fazil M, Fotopoulou E, Fruean SN, Gallardo-Arrieta F, Glebova O, Gouletsou PG, Häfelin Manrique RF, Henriques JJGP, Horta RS, Ignatenko N, Kane Y, King C, Koenig D, Krupa A, Kruzeniski SJ, Kwon YM, Lanza-Perea M, Lazyan M, Lopez Quintana AM, Losfelt T, Marino G, Martínez Castañeda S, Martínez-López MF, Meyer M, Migneco EJ, Nakanwagi B, Neal KB, Neunzig W, Ní Leathlobhair M, Nixon SJ, Ortega-Pacheco A, Pedraza-Ordoñez F, Peleteiro MC, Polak K, Pye RJ, Reece JF, Rojas Gutierrez J, Sadia H, Schmeling SK, Shamanova O, Sherlock AG, Stammnitz M, Steenland-Smit AE, Svitich A, Tapia Martínez LJ, Thoya Ngoka I, Torres CG, Tudor EM, van der Wel MG, Viţălaru BA, Vural SA, Walkinton O, Wang J, Wehrle-Martinez AS, Widdowson SAE, Stratton MR, Alexandrov LB, Martincorena I, Murchison EP.

Science. 2019 Aug 2;365(6452). pii: eaau9923. doi: 10.1126/science.aau9923.

PMID:
31371581
3.

Whole-Exome Sequencing Identifies Somatic Mutations Associated With Mortality in Metastatic Clear Cell Kidney Carcinoma.

Mendoza-Alvarez A, Guillen-Guio B, Baez-Ortega A, Hernandez-Perez C, Lakhwani-Lakhwani S, Maeso MD, Lorenzo-Salazar JM, Morales M, Flores C.

Front Genet. 2019 May 15;10:439. doi: 10.3389/fgene.2019.00439. eCollection 2019.

4.

The Origins and Vulnerabilities of Two Transmissible Cancers in Tasmanian Devils.

Stammnitz MR, Coorens THH, Gori KC, Hayes D, Fu B, Wang J, Martin-Herranz DE, Alexandrov LB, Baez-Ortega A, Barthorpe S, Beck A, Giordano F, Knowles GW, Kwon YM, Hall G, Price S, Pye RJ, Tubio JMC, Siddle HVT, Sohal SS, Woods GM, McDermott U, Yang F, Garnett MJ, Ning Z, Murchison EP.

Cancer Cell. 2018 Apr 9;33(4):607-619.e15. doi: 10.1016/j.ccell.2018.03.013.

5.

Computational approaches for discovery of mutational signatures in cancer.

Baez-Ortega A, Gori K.

Brief Bioinform. 2019 Jan 18;20(1):77-88. doi: 10.1093/bib/bbx082. Review.

6.

Streptococcal group B integrative and mobilizable element IMESag-rpsI encodes a functional relaxase involved in its transfer.

Lorenzo-Diaz F, Fernández-Lopez C, Douarre PE, Baez-Ortega A, Flores C, Glaser P, Espinosa M.

Open Biol. 2016 Oct;6(10). pii: 160084.

7.

IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data.

Baez-Ortega A, Lorenzo-Diaz F, Hernandez M, Gonzalez-Vila CI, Roda-Garcia JL, Colebrook M, Flores C.

Bioinformatics. 2015 Sep 1;31(17):2870-3. doi: 10.1093/bioinformatics/btv283. Epub 2015 May 6.

PMID:
25953799

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