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Clinical improvement and enhanced collateral vessel growth after xenogenic monocyte transplantation.

Wagner M, Mahlmann A, Deindl E, Zuschratter W, Riek-Burchardt M, Kostin S, Luani B, Baer C, Youssef A, Herold J.

Am J Transl Res. 2019 Jul 15;11(7):4063-4076. eCollection 2019.


Mutational landscape of patients with acute promyelocytic leukemia at diagnosis and relapse.

Iaccarino L, Ottone T, Alfonso V, Cicconi L, Divona M, Lavorgna S, Travaglini S, Ferrantini A, Falconi G, Baer C, Usai M, Forghieri F, Venditti A, Del Principe MI, Arcese W, Voso MT, Haferlach T, Lo-Coco F.

Am J Hematol. 2019 Jul 10. doi: 10.1002/ajh.25573. [Epub ahead of print]


"Somatic" and "pathogenic" - is the classification strategy applicable in times of large-scale sequencing?

Baer C, Walter W, Hutter S, Twardziok S, Meggendorfer M, Kern W, Haferlach T, Haferlach C.

Haematologica. 2019 Aug;104(8):1515-1520. doi: 10.3324/haematol.2019.218917. Epub 2019 Jul 4. No abstract available.


Real-time imaging of integrin β4 dynamics using a reporter cell line generated by Crispr/Cas9 genome editing.

Elaimy AL, Wang M, Sheel A, Brown CW, Walker MR, Amante JJ, Xue W, Chan A, Baer CE, Goel HL, Mercurio AM.

J Cell Sci. 2019 Jul 31;132(15). pii: jcs231241. doi: 10.1242/jcs.231241.


Evolution: Environmental Dependence of the Mutational Process.

Baer CF.

Curr Biol. 2019 Jun 3;29(11):R415-R417. doi: 10.1016/j.cub.2019.04.049.


Circulating Long Noncoding RNA LIPCAR Predicts Heart Failure Outcomes in Patients Without Chronic Kidney Disease.

Santer L, López B, Ravassa S, Baer C, Riedel I, Chatterjee S, Moreno MU, González A, Querejeta R, Pinet F, Thum T, Díez J.

Hypertension. 2019 Apr;73(4):820-828. doi: 10.1161/HYPERTENSIONAHA.118.12261.


Chemotherapy elicits pro-metastatic extracellular vesicles in breast cancer models.

Keklikoglou I, Cianciaruso C, Güç E, Squadrito ML, Spring LM, Tazzyman S, Lambein L, Poissonnier A, Ferraro GB, Baer C, Cassará A, Guichard A, Iruela-Arispe ML, Lewis CE, Coussens LM, Bardia A, Jain RK, Pollard JW, De Palma M.

Nat Cell Biol. 2019 Feb;21(2):190-202. doi: 10.1038/s41556-018-0256-3. Epub 2018 Dec 31.


ORBIT: a New Paradigm for Genetic Engineering of Mycobacterial Chromosomes.

Murphy KC, Nelson SJ, Nambi S, Papavinasasundaram K, Baer CE, Sassetti CM.

MBio. 2018 Dec 11;9(6). pii: e01467-18. doi: 10.1128/mBio.01467-18.


Evolution of the Mutational Process under Relaxed Selection in Caenorhabditis elegans.

Saxena AS, Salomon MP, Matsuba C, Yeh SD, Baer CF.

Mol Biol Evol. 2019 Feb 1;36(2):239-251. doi: 10.1093/molbev/msy213.


Head-to-head comparison of three experimental methods of quantifying competitive fitness in C. elegans.

Crombie TA, Saber S, Saxena AS, Egan R, Baer CF.

PLoS One. 2018 Oct 19;13(10):e0201507. doi: 10.1371/journal.pone.0201507. eCollection 2018.


Cardiac Rehabilitation Availability and Delivery in Canada: How Does It Compare With Other High-Income Countries?

Tran M, Pesah E, Turk-Adawi K, Supervia M, Lopez Jimenez F, Oh P, Baer C, Grace SL.

Can J Cardiol. 2018 Oct;34(10 Suppl 2):S252-S262. doi: 10.1016/j.cjca.2018.07.413. Epub 2018 Jul 26.


Utility of Serum miR-122, Liver Enzymes, and Hepatic Histopathology in Response to Hepatotoxicants in Sprague-Dawley Rats.

Carroll EE, Ippolito DL, Permenter MG, McDyre BC, Baer CE, Kumsher DM, Boyle MH, DiVito VT, Lewis JA, Koontz JM.

Toxicol Pathol. 2018 Oct;46(7):835-846. doi: 10.1177/0192623318795435. Epub 2018 Sep 11.


Network Architecture and Mutational Sensitivity of the C. elegans Metabolome.

Johnson LM, Chandler LM, Davies SK, Baer CF.

Front Mol Biosci. 2018 Jul 31;5:69. doi: 10.3389/fmolb.2018.00069. eCollection 2018.


Identification of prognostic parameters in CLL with no abnormalities detected by chromosome banding and FISH analyses.

Vetro C, Haferlach T, Jeromin S, Stengel A, Zenger M, Nadarajah N, Baer C, Weissmann S, Kern W, Meggendorfer M, Haferlach C.

Br J Haematol. 2018 Oct;183(1):47-59. doi: 10.1111/bjh.15498. Epub 2018 Jul 18.


Molecular patterns in cytopenia patients with or without evidence of myeloid neoplasm-a comparison of 756 cases.

Baer C, Pohlkamp C, Haferlach C, Kern W, Haferlach T.

Leukemia. 2018 Oct;32(10):2295-2298. doi: 10.1038/s41375-018-0119-8. Epub 2018 Mar 30. No abstract available.


Molecular genetic characterization of myeloid/lymphoid neoplasms associated with eosinophilia and rearrangement of PDGFRA, PDGFRB, FGFR1 or PCM1-JAK2.

Baer C, Muehlbacher V, Kern W, Haferlach C, Haferlach T.

Haematologica. 2018 Aug;103(8):e348-e350. doi: 10.3324/haematol.2017.187302. Epub 2018 Mar 22. No abstract available.


Human serum alters cell culture behavior and improves spheroid formation in comparison to fetal bovine serum.

Heger JI, Froehlich K, Pastuschek J, Schmidt A, Baer C, Mrowka R, Backsch C, Schleußner E, Markert UR, Schmidt A.

Exp Cell Res. 2018 Apr 1;365(1):57-65. doi: 10.1016/j.yexcr.2018.02.017. Epub 2018 Feb 21.


Higher robotic colorectal surgery volume improves outcomes.

Bastawrous A, Baer C, Rashidi L, Neighorn C.

Am J Surg. 2018 May;215(5):874-878. doi: 10.1016/j.amjsurg.2018.01.042. Epub 2018 Jan 31.


Comparative Proteomic Analysis of Liver Steatosis and Fibrosis after Oral Hepatotoxicant Administration in Sprague-Dawley Rats.

McDyre BC, AbdulHameed MDM, Permenter MG, Dennis WE, Baer CE, Koontz JM, Boyle MH, Wallqvist A, Lewis JA, Ippolito DL.

Toxicol Pathol. 2018 Feb;46(2):202-223. doi: 10.1177/0192623317747549. Epub 2018 Jan 29.


The mutational decay of male-male and hermaphrodite-hermaphrodite competitive fitness in the androdioecious nematode C. elegans.

Yeh SD, Saxena AS, Crombie TA, Feistel D, Johnson LM, Lam I, Lam J, Saber S, Baer CF.

Heredity (Edinb). 2018 Jan;120(1):1-12. doi: 10.1038/s41437-017-0003-8. Epub 2017 Nov 14.


A Newly Developed mm-Wave Sensor for Detecting Plaques of Arterial Vessels.

Vogt S, Detert M, Wagner D, Wessel J, Ramzan R, Nimphius W, Ramaswamy A, Guha S, Wenger C, Jamal FI, Eissa MH, Schumann U, Schmidt B, Rose G, Dahl C, Rolfes I, Notzon G, Baer C, Musch T.

Thorac Cardiovasc Surg. 2018 Jan;66(1):91-98. doi: 10.1055/s-0037-1606318. Epub 2017 Sep 18.


Intravital Microscopy of Monocyte Homing and Tumor-Related Angiogenesis in a Murine Model of Peripheral Arterial Disease.

Wagner M, Baer C, Zuschratter W, Riek-Burchardt M, Deffge C, Weinert S, Lee JC, Braun-Dullaeus RC, Herold J.

J Vis Exp. 2017 Aug 26;(126). doi: 10.3791/56290.


GRACE risk score: Sex-based validity of in-hospital mortality prediction in Canadian patients with acute coronary syndrome.

Gong IY, Goodman SG, Brieger D, Gale CP, Chew DP, Welsh RC, Huynh T, DeYoung JP, Baer C, Gyenes GT, Udell JA, Fox KAA, Yan AT; Canadian GRACE/GRACE-2 and CANRACE Investigators.

Int J Cardiol. 2017 Oct 1;244:24-29. doi: 10.1016/j.ijcard.2017.06.055. Epub 2017 Jun 15.


Experimental Evolution with Caenorhabditis Nematodes.

Teotónio H, Estes S, Phillips PC, Baer CF.

Genetics. 2017 Jun;206(2):691-716. doi: 10.1534/genetics.115.186288. Review.


Nitric oxide prevents a pathogen-permissive granulocytic inflammation during tuberculosis.

Mishra BB, Lovewell RR, Olive AJ, Zhang G, Wang W, Eugenin E, Smith CM, Phuah JY, Long JE, Dubuke ML, Palace SG, Goguen JD, Baker RE, Nambi S, Mishra R, Booty MG, Baer CE, Shaffer SA, Dartois V, McCormick BA, Chen X, Sassetti CM.

Nat Microbiol. 2017 May 15;2:17072. doi: 10.1038/nmicrobiol.2017.72.


Emergency Presentations of Colorectal Cancer.

Baer C, Menon R, Bastawrous S, Bastawrous A.

Surg Clin North Am. 2017 Jun;97(3):529-545. doi: 10.1016/j.suc.2017.01.004. Review.


Implementing a Pilot Trial of an Infection Control Program in Nursing Homes: Results of a Matched Cluster Randomized Trial.

McConeghy KW, Baier R, McGrath KP, Baer CJ, Mor V.

J Am Med Dir Assoc. 2017 Aug 1;18(8):707-712. doi: 10.1016/j.jamda.2017.03.003. Epub 2017 Apr 29.


Fitting the Message to the Listener: Children Selectively Mention General and Specific Facts.

Baer C, Friedman O.

Child Dev. 2018 Mar;89(2):461-475. doi: 10.1111/cdev.12751. Epub 2017 Feb 9.


Considerations when choosing a genetic model organism for metabolomics studies.

Reed LK, Baer CF, Edison AS.

Curr Opin Chem Biol. 2017 Feb;36:7-14. doi: 10.1016/j.cbpa.2016.12.005. Epub 2016 Dec 23. Review.


Prognostic relevance of miRNA-155 methylation in anaplastic glioma.

Schliesser MG, Claus R, Hielscher T, Grimm C, Weichenhan D, Blaes J, Wiestler B, Hau P, Schramm J, Sahm F, Weiß EK, Weiler M, Baer C, Schmidt-Graf F, Schackert G, Westphal M, Hertenstein A, Roth P, Galldiks N, Hartmann C, Pietsch T, Felsberg J, Reifenberger G, Sabel MC, Winkler F, von Deimling A, Meisner C, Vajkoczy P, Platten M, Weller M, Plass C, Wick W.

Oncotarget. 2016 Dec 13;7(50):82028-82045. doi: 10.18632/oncotarget.13452.


Ode to Ehrlich and Raven or how herbivorous insects might drive plant speciation.

Marquis RJ, Salazar D, Baer C, Reinhardt J, Priest G, Barnett K.

Ecology. 2016 Nov;97(11):2939-2951. doi: 10.1002/ecy.1534.


Restoring p53 Function in Human Melanoma Cells by Inhibiting MDM2 and Cyclin B1/CDK1-Phosphorylated Nuclear iASPP.

Lu M, Breyssens H, Salter V, Zhong S, Hu Y, Baer C, Ratnayaka I, Sullivan A, Brown NR, Endicott J, Knapp S, Kessler BM, Middleton MR, Siebold C, Jones EY, Sviderskaya EV, Cebon J, John T, Caballero OL, Goding CR, Lu X.

Cancer Cell. 2016 Nov 14;30(5):822-823. doi: 10.1016/j.ccell.2016.09.019. No abstract available.


Genetic characterization of MYD88-mutated lymphoplasmacytic lymphoma in comparison with MYD88-mutated chronic lymphocytic leukemia.

Baer C, Dicker F, Kern W, Haferlach T, Haferlach C.

Leukemia. 2017 Jun;31(6):1355-1362. doi: 10.1038/leu.2016.330. Epub 2016 Nov 14.


Structural and Genetic Analyses of the Mycobacterium tuberculosis Protein Kinase B Sensor Domain Identify a Potential Ligand-binding Site.

Prigozhin DM, Papavinasasundaram KG, Baer CE, Murphy KC, Moskaleva A, Chen TY, Alber T, Sassetti CM.

J Biol Chem. 2016 Oct 28;291(44):22961-22969. Epub 2016 Sep 6.


Perivascular Macrophages Limit Permeability.

He H, Mack JJ, Güç E, Warren CM, Squadrito ML, Kilarski WW, Baer C, Freshman RD, McDonald AI, Ziyad S, Swartz MA, De Palma M, Iruela-Arispe ML.

Arterioscler Thromb Vasc Biol. 2016 Nov;36(11):2203-2212. Epub 2016 Sep 15.


Cadherin-6 is a putative tumor suppressor and target of epigenetically dysregulated miR-429 in cholangiocarcinoma.

Goeppert B, Ernst C, Baer C, Roessler S, Renner M, Mehrabi A, Hafezi M, Pathil A, Warth A, Stenzinger A, Weichert W, Bähr M, Will R, Schirmacher P, Plass C, Weichenhan D.

Epigenetics. 2016 Nov;11(11):780-790. Epub 2016 Sep 3.


The mutational structure of metabolism in Caenorhabditis elegans.

Davies SK, Leroi A, Burt A, Bundy JG, Baer CF.

Evolution. 2016 Oct;70(10):2239-2246. doi: 10.1111/evo.13020. Epub 2016 Aug 24.


Mutation Is a Sufficient and Robust Predictor of Genetic Variation for Mitotic Spindle Traits in Caenorhabditis elegans.

Farhadifar R, Ponciano JM, Andersen EC, Needleman DJ, Baer CF.

Genetics. 2016 Aug;203(4):1859-70. doi: 10.1534/genetics.115.185736. Epub 2016 Jun 22.


A cytoplasmic peptidoglycan amidase homologue controls mycobacterial cell wall synthesis.

Boutte CC, Baer CE, Papavinasasundaram K, Liu W, Chase MR, Meniche X, Fortune SM, Sassetti CM, Ioerger TR, Rubin EJ.

Elife. 2016 Jun 15;5. pii: e14590. doi: 10.7554/eLife.14590.


Suppression of microRNA activity amplifies IFN-γ-induced macrophage activation and promotes anti-tumour immunity.

Baer C, Squadrito ML, Laoui D, Thompson D, Hansen SK, Kiialainen A, Hoves S, Ries CH, Ooi CH, De Palma M.

Nat Cell Biol. 2016 Jul;18(7):790-802. doi: 10.1038/ncb3371. Epub 2016 Jun 13.


Children's generic interpretation of pretense.

Baer C, Friedman O.

J Exp Child Psychol. 2016 Oct;150:99-111. doi: 10.1016/j.jecp.2016.05.004. Epub 2016 Jun 3.


Spatially distinct and metabolically active membrane domain in mycobacteria.

Hayashi JM, Luo CY, Mayfield JA, Hsu T, Fukuda T, Walfield AL, Giffen SR, Leszyk JD, Baer CE, Bennion OT, Madduri A, Shaffer SA, Aldridge BB, Sassetti CM, Sandler SJ, Kinoshita T, Moody DB, Morita YS.

Proc Natl Acad Sci U S A. 2016 May 10;113(19):5400-5. doi: 10.1073/pnas.1525165113. Epub 2016 Apr 25.


Ultra-deep sequencing leads to earlier and more sensitive detection of the tyrosine kinase inhibitor resistance mutation T315I in chronic myeloid leukemia.

Baer C, Kern W, Koch S, Nadarajah N, Schindela S, Meggendorfer M, Haferlach C, Haferlach T.

Haematologica. 2016 Jul;101(7):830-8. doi: 10.3324/haematol.2016.145888. Epub 2016 Apr 21.


Caspase cleavage of iASPP potentiates its ability to inhibit p53 and NF-κB.

Hu Y, Ge W, Wang X, Sutendra G, Zhao K, Dedeić Z, Slee EA, Baer C, Lu X.

Oncotarget. 2015 Dec 15;6(40):42478-90. doi: 10.18632/oncotarget.6478.


Dichlorvos exposure results in large scale disruption of energy metabolism in the liver of the zebrafish, Danio rerio.

Bui-Nguyen TM, Baer CE, Lewis JA, Yang D, Lein PJ, Jackson DA.

BMC Genomics. 2015 Oct 24;16:853. doi: 10.1186/s12864-015-1941-2.


Genome-wide gene expression profiling of acute metal exposures in male zebrafish.

Baer CE, Ippolito DL, Hussainzada N, Lewis JA, Jackson DA, Stallings JD.

Genom Data. 2014 Oct 23;2:363-5. doi: 10.1016/j.gdata.2014.10.013. eCollection 2014 Dec.


Gene Expression Patterns Associated With Histopathology in Toxic Liver Fibrosis.

Ippolito DL, AbdulHameed MD, Tawa GJ, Baer CE, Permenter MG, McDyre BC, Dennis WE, Boyle MH, Hobbs CA, Streicker MA, Snowden BS, Lewis JA, Wallqvist A, Stallings JD.

Toxicol Sci. 2016 Jan;149(1):67-88. doi: 10.1093/toxsci/kfv214. Epub 2015 Sep 22.


Phosphorylation of the Peptidoglycan Synthase PonA1 Governs the Rate of Polar Elongation in Mycobacteria.

Kieser KJ, Boutte CC, Kester JC, Baer CE, Barczak AK, Meniche X, Chao MC, Rego EH, Sassetti CM, Fortune SM, Rubin EJ.

PLoS Pathog. 2015 Jun 26;11(6):e1005010. doi: 10.1371/journal.ppat.1005010. eCollection 2015 Jun.


Abiotic stress does not magnify the deleterious effects of spontaneous mutations.

Andrew JR, Dossey MM, Garza VO, Keller-Pearson M, Baer CF, Joyner-Matos J.

Heredity (Edinb). 2015 Dec;115(6):503-8. doi: 10.1038/hdy.2015.51. Epub 2015 Jun 24.


Temporal changes in rat liver gene expression after acute cadmium and chromium exposure.

Madejczyk MS, Baer CE, Dennis WE, Minarchick VC, Leonard SS, Jackson DA, Stallings JD, Lewis JA.

PLoS One. 2015 May 19;10(5):e0127327. doi: 10.1371/journal.pone.0127327. eCollection 2015.

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