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Partially dissecting electron fluxes in both photosystems in spinach leaf discs during photosynthetic induction.

Zhang MM, Fan DY, Murakami K, Badger MR, Sun GY, Chow WS.

Plant Cell Physiol. 2019 Jul 4. pii: pcz114. doi: 10.1093/pcp/pcz114. [Epub ahead of print]


Carboxysome encapsulation of the CO2-fixing enzyme Rubisco in tobacco chloroplasts.

Long BM, Hee WY, Sharwood RE, Rae BD, Kaines S, Lim YL, Nguyen ND, Massey B, Bala S, von Caemmerer S, Badger MR, Price GD.

Nat Commun. 2018 Sep 3;9(1):3570. doi: 10.1038/s41467-018-06044-0.


Measuring CO2 and HCO3- permeabilities of isolated chloroplasts using a MIMS-18O approach.

Tolleter D, Chochois V, Poiré R, Price GD, Badger MR.

J Exp Bot. 2017 Jun 1;68(14):3915-3924. doi: 10.1093/jxb/erx188.


The combination of gas-phase fluorophore technology and automation to enable high-throughput analysis of plant respiration.

Scafaro AP, Negrini ACA, O'Leary B, Rashid FAA, Hayes L, Fan Y, Zhang Y, Chochois V, Badger MR, Millar AH, Atkin OK.

Plant Methods. 2017 Mar 21;13:16. doi: 10.1186/s13007-017-0169-3. eCollection 2017.


Artificial remodelling of alternative electron flow by flavodiiron proteins in Arabidopsis.

Yamamoto H, Takahashi S, Badger MR, Shikanai T.

Nat Plants. 2016 Feb 22;2:16012. doi: 10.1038/nplants.2016.12.


Partially dissecting the steady-state electron fluxes in Photosystem I in wild-type and pgr5 and ndh mutants of Arabidopsis.

Kou J, Takahashi S, Fan DY, Badger MR, Chow WS.

Front Plant Sci. 2015 Sep 17;6:758. doi: 10.3389/fpls.2015.00758. eCollection 2015.


PhenoMeter: A Metabolome Database Search Tool Using Statistical Similarity Matching of Metabolic Phenotypes for High-Confidence Detection of Functional Links.

Carroll AJ, Zhang P, Whitehead L, Kaines S, Tcherkez G, Badger MR.

Front Bioeng Biotechnol. 2015 Jul 29;3:106. doi: 10.3389/fbioe.2015.00106. eCollection 2015.


Transplastomic integration of a cyanobacterial bicarbonate transporter into tobacco chloroplasts.

Pengelly JJ, Förster B, von Caemmerer S, Badger MR, Price GD, Whitney SM.

J Exp Bot. 2014 Jul;65(12):3071-80. doi: 10.1093/jxb/eru156. Epub 2014 Apr 18.


A novel P700 redox kinetics probe for rapid, non-intrusive and whole-tissue determination of photosystem II functionality, and the stoichiometry of the two photosystems in vivo.

Jia H, Dwyer SA, Fan DY, Han Y, Badger MR, von Caemmerer S, Chow WS.

Physiol Plant. 2014 Nov;152(3):403-13. doi: 10.1111/ppl.12235. Epub 2014 Jun 26.


Online oxygen kinetic isotope effects using membrane inlet mass spectrometry can differentiate between oxidases for mechanistic studies and calculation of their contributions to oxygen consumption in whole tissues.

Cheah MH, Millar AH, Myers RC, Day DA, Roth J, Hillier W, Badger MR.

Anal Chem. 2014 May 20;86(10):5171-8. doi: 10.1021/ac501086n. Epub 2014 May 1.


Comparing the in vivo function of α-carboxysomes and β-carboxysomes in two model cyanobacteria.

Whitehead L, Long BM, Price GD, Badger MR.

Plant Physiol. 2014 May;165(1):398-411. doi: 10.1104/pp.114.237941. Epub 2014 Mar 18.


Cyanobacterial carboxysomes: microcompartments that facilitate CO2 fixation.

Rae BD, Long BM, Whitehead LF, Förster B, Badger MR, Price GD.

J Mol Microbiol Biotechnol. 2013;23(4-5):300-7. doi: 10.1159/000351342. Epub 2013 Aug 5. Review.


Temperature response of in vivo Rubisco kinetics and mesophyll conductance in Arabidopsis thaliana: comparisons to Nicotiana tabacum.

Walker B, Ariza LS, Kaines S, Badger MR, Cousins AB.

Plant Cell Environ. 2013 Dec;36(12):2108-19. doi: 10.1111/pce.12166. Epub 2013 Aug 22.


Gymnosperms have increased capacity for electron leakage to oxygen (Mehler and PTOX reactions) in photosynthesis compared with angiosperms.

Shirao M, Kuroki S, Kaneko K, Kinjo Y, Tsuyama M, Förster B, Takahashi S, Badger MR.

Plant Cell Physiol. 2013 Jul;54(7):1152-63. doi: 10.1093/pcp/pct066. Epub 2013 Apr 26.


Thermal acclimation of the symbiotic alga Symbiodinium spp. alleviates photobleaching under heat stress.

Takahashi S, Yoshioka-Nishimura M, Nanba D, Badger MR.

Plant Physiol. 2013 Jan;161(1):477-85. doi: 10.1104/pp.112.207480. Epub 2012 Nov 20.


The cyanobacterial CCM as a source of genes for improving photosynthetic CO2 fixation in crop species.

Price GD, Pengelly JJ, Forster B, Du J, Whitney SM, von Caemmerer S, Badger MR, Howitt SM, Evans JR.

J Exp Bot. 2013 Jan;64(3):753-68. doi: 10.1093/jxb/ers257. Epub 2012 Oct 1. Review.


The genetic dissection of a short-term response to low CO(2) supports the possibility for peroxide-mediated decarboxylation of photorespiratory intermediates in the peroxisome.

Keech O, Zhou W, Fenske R, Colas-des-Francs-Small C, Bussell JD, Badger MR, Smith SM.

Mol Plant. 2012 Nov;5(6):1413-6. doi: 10.1093/mp/sss104. Epub 2012 Sep 30. No abstract available.


Structural determinants of the outer shell of β-carboxysomes in Synechococcus elongatus PCC 7942: roles for CcmK2, K3-K4, CcmO, and CcmL.

Rae BD, Long BM, Badger MR, Price GD.

PLoS One. 2012;7(8):e43871. doi: 10.1371/journal.pone.0043871. Epub 2012 Aug 22.


Antisense reductions in the PsbO protein of photosystem II leads to decreased quantum yield but similar maximal photosynthetic rates.

Dwyer SA, Chow WS, Yamori W, Evans JR, Kaines S, Badger MR, von Caemmerer S.

J Exp Bot. 2012 Aug;63(13):4781-95. doi: 10.1093/jxb/ers156.


Over-expression of the β-carboxysomal CcmM protein in Synechococcus PCC7942 reveals a tight co-regulation of carboxysomal carbonic anhydrase (CcaA) and M58 content.

Long BM, Rae BD, Badger MR, Price GD.

Photosynth Res. 2011 Sep;109(1-3):33-45. doi: 10.1007/s11120-011-9659-8. Epub 2011 May 20.


Peroxisomal hydroxypyruvate reductase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release.

Cousins AB, Walker BJ, Pracharoenwattana I, Smith SM, Badger MR.

Photosynth Res. 2011 Sep;108(2-3):91-100. doi: 10.1007/s11120-011-9651-3. Epub 2011 May 13.


The CO2-concentrating mechanism of Synechococcus WH5701 is composed of native and horizontally-acquired components.

Rae BD, Förster B, Badger MR, Price GD.

Photosynth Res. 2011 Sep;109(1-3):59-72. doi: 10.1007/s11120-011-9641-5. Epub 2011 Mar 8.


The roles of ATP synthase and the cytochrome b6/f complexes in limiting chloroplast electron transport and determining photosynthetic capacity.

Yamori W, Takahashi S, Makino A, Price GD, Badger MR, von Caemmerer S.

Plant Physiol. 2011 Feb;155(2):956-62. doi: 10.1104/pp.110.168435. Epub 2010 Dec 21.


Photoprotection in plants: a new light on photosystem II damage.

Takahashi S, Badger MR.

Trends Plant Sci. 2011 Jan;16(1):53-60. doi: 10.1016/j.tplants.2010.10.001. Epub 2010 Nov 1. Review.


The cytoskeleton and the peroxisomal-targeted snowy cotyledon3 protein are required for chloroplast development in Arabidopsis.

Albrecht V, Simková K, Carrie C, Delannoy E, Giraud E, Whelan J, Small ID, Apel K, Badger MR, Pogson BJ.

Plant Cell. 2010 Oct;22(10):3423-38. doi: 10.1105/tpc.110.074781. Epub 2010 Oct 26.


The prospect of using cyanobacterial bicarbonate transporters to improve leaf photosynthesis in C3 crop plants.

Price GD, Badger MR, von Caemmerer S.

Plant Physiol. 2011 Jan;155(1):20-6. doi: 10.1104/pp.110.164681. Epub 2010 Oct 5. No abstract available.


The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets.

Carroll AJ, Badger MR, Harvey Millar A.

BMC Bioinformatics. 2010 Jul 14;11:376. doi: 10.1186/1471-2105-11-376.


Production and diffusion of chloroplastic H2O2 and its implication to signalling.

Mubarakshina MM, Ivanov BN, Naydov IA, Hillier W, Badger MR, Krieger-Liszkay A.

J Exp Bot. 2010 Aug;61(13):3577-87. doi: 10.1093/jxb/erq171. Epub 2010 Jul 1.


The solar action spectrum of photosystem II damage.

Takahashi S, Milward SE, Yamori W, Evans JR, Hillier W, Badger MR.

Plant Physiol. 2010 Jul;153(3):988-93. doi: 10.1104/pp.110.155747. Epub 2010 May 11.


Functional cyanobacterial beta-carboxysomes have an absolute requirement for both long and short forms of the CcmM protein.

Long BM, Tucker L, Badger MR, Price GD.

Plant Physiol. 2010 May;153(1):285-93. doi: 10.1104/pp.110.154948. Epub 2010 Mar 19.


Simultaneous determination of Rubisco carboxylase and oxygenase kinetic parameters in Triticum aestivum and Zea mays using membrane inlet mass spectrometry.

Cousins AB, Ghannoum O, VON Caemmerer S, Badger MR.

Plant Cell Environ. 2010 Mar;33(3):444-52. doi: 10.1111/j.1365-3040.2009.02095.x. Epub 2009 Nov 25.


On-line mass spectrometry: membrane inlet sampling.

Beckmann K, Messinger J, Badger MR, Wydrzynski T, Hillier W.

Photosynth Res. 2009 Nov-Dec;102(2-3):511-22. doi: 10.1007/s11120-009-9474-7. Review.


Light and CO2 do not affect the mesophyll conductance to CO2 diffusion in wheat leaves.

Tazoe Y, von Caemmerer S, Badger MR, Evans JR.

J Exp Bot. 2009;60(8):2291-301. doi: 10.1093/jxb/erp035. Epub 2009 Mar 2.


Different thermal sensitivity of the repair of photodamaged photosynthetic machinery in cultured Symbiodinium species.

Takahashi S, Whitney SM, Badger MR.

Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3237-42. doi: 10.1073/pnas.0808363106. Epub 2009 Feb 6.


How does cyclic electron flow alleviate photoinhibition in Arabidopsis?

Takahashi S, Milward SE, Fan DY, Chow WS, Badger MR.

Plant Physiol. 2009 Mar;149(3):1560-7. doi: 10.1104/pp.108.134122. Epub 2008 Dec 31.


A rapid, non-invasive procedure for quantitative assessment of drought survival using chlorophyll fluorescence.

Woo NS, Badger MR, Pogson BJ.

Plant Methods. 2008 Nov 11;4:27. doi: 10.1186/1746-4811-4-27.


Peroxisomal malate dehydrogenase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release.

Cousins AB, Pracharoenwattana I, Zhou W, Smith SM, Badger MR.

Plant Physiol. 2008 Oct;148(2):786-95. doi: 10.1104/pp.108.122622. Epub 2008 Aug 6.


Localization of sucrose synthase in developing seed and siliques of Arabidopsis thaliana reveals diverse roles for SUS during development.

Fallahi H, Scofield GN, Badger MR, Chow WS, Furbank RT, Ruan YL.

J Exp Bot. 2008;59(12):3283-95. doi: 10.1093/jxb/ern180. Epub 2008 Jul 16.


Dynamic changes in the mitochondrial electron transport chain underpinning cold acclimation of leaf respiration.

Armstrong AF, Badger MR, Day DA, Barthet MM, Smith PM, Millar AH, Whelan J, Atkin OK.

Plant Cell Environ. 2008 Aug;31(8):1156-69. doi: 10.1111/j.1365-3040.2008.01830.x. Epub 2008 May 28.


The effects of Rubisco activase on C4 photosynthesis and metabolism at high temperature.

Hendrickson L, Sharwood R, Ludwig M, Whitney SM, Badger MR, von Caemmerer S.

J Exp Bot. 2008;59(7):1789-98. doi: 10.1093/jxb/erm373. Epub 2008 Mar 28.


C4 photosynthetic isotope exchange in NAD-ME- and NADP-ME-type grasses.

Cousins AB, Badger MR, von Caemmerer S.

J Exp Bot. 2008;59(7):1695-703. doi: 10.1093/jxb/ern001. Epub 2008 Mar 28.


Multiple Rubisco forms in proteobacteria: their functional significance in relation to CO2 acquisition by the CBB cycle.

Badger MR, Bek EJ.

J Exp Bot. 2008;59(7):1525-41. doi: 10.1093/jxb/erm297. Epub 2008 Feb 2. Review.


The contribution of photosynthesis to the red light response of stomatal conductance.

Baroli I, Price GD, Badger MR, von Caemmerer S.

Plant Physiol. 2008 Feb;146(2):737-47. Epub 2007 Dec 7.


Differences in carbon isotope discrimination of three variants of D-ribulose-1,5-bisphosphate carboxylase/oxygenase reflect differences in their catalytic mechanisms.

McNevin DB, Badger MR, Whitney SM, von Caemmerer S, Tcherkez GG, Farquhar GD.

J Biol Chem. 2007 Dec 7;282(49):36068-76. Epub 2007 Oct 9.


The role of phosphoenolpyruvate carboxylase during C4 photosynthetic isotope exchange and stomatal conductance.

Cousins AB, Baroli I, Badger MR, Ivakov A, Lea PJ, Leegood RC, von Caemmerer S.

Plant Physiol. 2007 Nov;145(3):1006-17. Epub 2007 Sep 7.


Analysis of carboxysomes from Synechococcus PCC7942 reveals multiple Rubisco complexes with carboxysomal proteins CcmM and CcaA.

Long BM, Badger MR, Whitney SM, Price GD.

J Biol Chem. 2007 Oct 5;282(40):29323-35. Epub 2007 Aug 3.


New roads lead to Rubisco in archaebacteria.

Mueller-Cajar O, Badger MR.

Bioessays. 2007 Aug;29(8):722-4. Review.


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