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Items: 11

1.

Single cell RNA-Seq reveals pre-cDCs fate determined by transcription factor combinatorial dose.

Ma W, Lee J, Backenroth D, Zhou YJ, Bush E, Sims P, Liu K, Shen Y.

BMC Mol Cell Biol. 2019 Jun 28;20(1):20. doi: 10.1186/s12860-019-0199-y.

2.

A test for deviations from expected genotype frequencies on the X chromosome for sex-biased admixed populations.

Backenroth D, Carmi S.

Heredity (Edinb). 2019 Oct;123(4):470-478. doi: 10.1038/s41437-019-0233-z. Epub 2019 May 17.

PMID:
31101879
3.

Association of Patient Characteristics and Tumor Genomics With Clinical Outcomes Among Patients With Non-Small Cell Lung Cancer Using a Clinicogenomic Database.

Singal G, Miller PG, Agarwala V, Li G, Kaushik G, Backenroth D, Gossai A, Frampton GM, Torres AZ, Lehnert EM, Bourque D, O'Connell C, Bowser B, Caron T, Baydur E, Seidl-Rathkopf K, Ivanov I, Alpha-Cobb G, Guria A, He J, Frank S, Nunnally AC, Bailey M, Jaskiw A, Feuchtbaum D, Nussbaum N, Abernethy AP, Miller VA.

JAMA. 2019 Apr 9;321(14):1391-1399. doi: 10.1001/jama.2019.3241.

4.

Haploseek: a 24-hour all-in-one method for preimplantation genetic diagnosis (PGD) of monogenic disease and aneuploidy.

Backenroth D, Zahdeh F, Kling Y, Peretz A, Rosen T, Kort D, Zeligson S, Dror T, Kirshberg S, Burak E, Segel R, Levy-Lahad E, Zangen D, Altarescu G, Carmi S, Zeevi DA.

Genet Med. 2019 Jun;21(6):1390-1399. doi: 10.1038/s41436-018-0351-7. Epub 2018 Nov 19.

PMID:
30449887
5.

Modeling motor learning using heteroskedastic functional principal components analysis.

Backenroth D, Goldsmith J, Harran MD, Cortes JC, Krakauer JW, Kitago T.

J Am Stat Assoc. 2018;113(523):1003-1015. doi: 10.1080/01621459.2017.1379403. Epub 2017 Sep 29.

6.

FUN-LDA: A Latent Dirichlet Allocation Model for Predicting Tissue-Specific Functional Effects of Noncoding Variation: Methods and Applications.

Backenroth D, He Z, Kiryluk K, Boeva V, Pethukova L, Khurana E, Christiano A, Buxbaum JD, Ionita-Laza I.

Am J Hum Genet. 2018 May 3;102(5):920-942. doi: 10.1016/j.ajhg.2018.03.026.

7.

Monitoring prescribing patterns using regression and electronic health records.

Backenroth D, Chase HS, Wei Y, Friedman C.

BMC Med Inform Decis Mak. 2017 Dec 19;17(1):175. doi: 10.1186/s12911-017-0575-5.

8.

Using Rich Data on Comorbidities in Case-Control Study Design with Electronic Health Record Data Improves Control of Confounding in the Detection of Adverse Drug Reactions.

Backenroth D, Chase H, Friedman C, Wei Y.

PLoS One. 2016 Oct 7;11(10):e0164304. doi: 10.1371/journal.pone.0164304. eCollection 2016.

9.

Reduced survival in adult cystic fibrosis despite attenuated lung function decline.

Keating C, Poor AD, Liu X, Chiuzan C, Backenroth D, Zhang Y, DiMango E.

J Cyst Fibros. 2017 Jan;16(1):78-84. doi: 10.1016/j.jcf.2016.07.012. Epub 2016 Aug 10.

10.

Case Example of Dose Optimization Using Data From Bortezomib Dose-Finding Clinical Trials.

Lee SM, Backenroth D, Cheung YK, Hershman DL, Vulih D, Anderson B, Ivy P, Minasian L.

J Clin Oncol. 2016 Apr 20;34(12):1395-401. doi: 10.1200/JCO.2015.66.0662. Epub 2016 Feb 29.

11.

CANOES: detecting rare copy number variants from whole exome sequencing data.

Backenroth D, Homsy J, Murillo LR, Glessner J, Lin E, Brueckner M, Lifton R, Goldmuntz E, Chung WK, Shen Y.

Nucleic Acids Res. 2014 Jul;42(12):e97. doi: 10.1093/nar/gku345. Epub 2014 Apr 25.

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