Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 18

1.

tRNA epitranscriptomics and biased codon are linked to proteome expression in Plasmodium falciparum.

Ng CS, Sinha A, Aniweh Y, Nah Q, Babu IR, Gu C, Chionh YH, Dedon PC, Preiser PR.

Mol Syst Biol. 2018 Oct 4;14(10):e8009. doi: 10.15252/msb.20178009.

2.

tRNA-mediated codon-biased translation in mycobacterial hypoxic persistence.

Chionh YH, McBee M, Babu IR, Hia F, Lin W, Zhao W, Cao J, Dziergowska A, Malkiewicz A, Begley TJ, Alonso S, Dedon PC.

Nat Commun. 2016 Nov 11;7:13302. doi: 10.1038/ncomms13302.

3.

Trm9-Catalyzed tRNA Modifications Regulate Global Protein Expression by Codon-Biased Translation.

Deng W, Babu IR, Su D, Yin S, Begley TJ, Dedon PC.

PLoS Genet. 2015 Dec 15;11(12):e1005706. doi: 10.1371/journal.pgen.1005706. eCollection 2015 Dec.

4.

Metabolic fate of endogenous molecular damage: Urinary glutathione conjugates of DNA-derived base propenals as markers of inflammation.

Jumpathong W, Chan W, Taghizadeh K, Babu IR, Dedon PC.

Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):E4845-53. doi: 10.1073/pnas.1503945112. Epub 2015 Aug 17.

5.

A Platform for Discovery and Quantification of Modified Ribonucleosides in RNA: Application to Stress-Induced Reprogramming of tRNA Modifications.

Cai WM, Chionh YH, Hia F, Gu C, Kellner S, McBee ME, Ng CS, Pang YL, Prestwich EG, Lim KS, Babu IR, Begley TJ, Dedon PC.

Methods Enzymol. 2015;560:29-71. doi: 10.1016/bs.mie.2015.03.004. Epub 2015 Jul 17.

6.

Highly Predictive Reprogramming of tRNA Modifications Is Linked to Selective Expression of Codon-Biased Genes.

Chan CT, Deng W, Li F, DeMott MS, Babu IR, Begley TJ, Dedon PC.

Chem Res Toxicol. 2015 May 18;28(5):978-88. doi: 10.1021/acs.chemrestox.5b00004. Epub 2015 Apr 13.

7.

Quantitative analysis of ribonucleoside modifications in tRNA by HPLC-coupled mass spectrometry.

Su D, Chan CT, Gu C, Lim KS, Chionh YH, McBee ME, Russell BS, Babu IR, Begley TJ, Dedon PC.

Nat Protoc. 2014 Apr;9(4):828-41. doi: 10.1038/nprot.2014.047. Epub 2014 Mar 13.

8.

Identification and codon reading properties of 5-cyanomethyl uridine, a new modified nucleoside found in the anticodon wobble position of mutant haloarchaeal isoleucine tRNAs.

Mandal D, Köhrer C, Su D, Babu IR, Chan CT, Liu Y, Söll D, Blum P, Kuwahara M, Dedon PC, Rajbhandary UL.

RNA. 2014 Feb;20(2):177-88. doi: 10.1261/rna.042358.113. Epub 2013 Dec 16.

9.

In situ analysis of 8-oxo-7,8-dihydro-2'-deoxyguanosine oxidation reveals sequence- and agent-specific damage spectra.

Lim KS, Cui L, Taghizadeh K, Wishnok JS, Chan W, DeMott MS, Babu IR, Tannenbaum SR, Dedon PC.

J Am Chem Soc. 2012 Oct 31;134(43):18053-64. doi: 10.1021/ja307525h. Epub 2012 Oct 22.

10.

Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins.

Chan CT, Pang YL, Deng W, Babu IR, Dyavaiah M, Begley TJ, Dedon PC.

Nat Commun. 2012 Jul 3;3:937. doi: 10.1038/ncomms1938.

11.

Sequence-dependent variation in the reactivity of 8-Oxo-7,8-dihydro-2'-deoxyguanosine toward oxidation.

Lim KS, Taghizadeh K, Wishnok JS, Babu IR, Shafirovich V, Geacintov NE, Dedon PC.

Chem Res Toxicol. 2012 Feb 20;25(2):366-73. doi: 10.1021/tx200422g. Epub 2011 Dec 2.

12.

Identification of N6,N6-dimethyladenosine in transfer RNA from Mycobacterium bovis Bacille Calmette-Guérin.

Chan CT, Chionh YH, Ho CH, Lim KS, Babu IR, Ang E, Wenwei L, Alonso S, Dedon PC.

Molecules. 2011 Jun 21;16(6):5168-81. doi: 10.3390/molecules16065168.

13.

PGE2-regulated wnt signaling and N-acetylcysteine are synergistically hepatoprotective in zebrafish acetaminophen injury.

North TE, Babu IR, Vedder LM, Lord AM, Wishnok JS, Tannenbaum SR, Zon LI, Goessling W.

Proc Natl Acad Sci U S A. 2010 Oct 5;107(40):17315-20. doi: 10.1073/pnas.1008209107. Epub 2010 Sep 20.

15.

Comparative time-dependent analysis of potential inflammation biomarkers in lymphoma-bearing SJL mice.

Kristiansson MH, Bhat VB, Babu IR, Wishnok JS, Tannenbaum SR.

J Proteome Res. 2007 May;6(5):1735-44. Epub 2007 Mar 28.

16.

A Highly stereospecific and efficient synthesis of homopentafluoro- phenylalanine.

Babu IR, Hamill EK, Kumar K.

J Org Chem. 2004 Aug 6;69(16):5468-70.

PMID:
15287798
17.
18.

Supplemental Content

Support Center