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Items: 36

1.

Shifts in the Human Gut Microbiota Structure Caused by Quadruple Helicobacter pylori Eradication Therapy.

Olekhnovich EI, Manolov AI, Samoilov AE, Prianichnikov NA, Malakhova MV, Tyakht AV, Pavlenko AV, Babenko VV, Larin AK, Kovarsky BA, Starikova EV, Glushchenko OE, Safina DD, Markelova MI, Boulygina EA, Khusnutdinova DR, Malanin SY, Abdulkhakov SR, Abdulkhakov RA, Grigoryeva TV, Kostryukova ES, Govorun VM, Ilina EN.

Front Microbiol. 2019 Aug 27;10:1902. doi: 10.3389/fmicb.2019.01902. eCollection 2019.

2.

Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.

Grafskaia EN, Nadezhdin KD, Talyzina IA, Polina NF, Podgorny OV, Pavlova ER, Bashkirov PV, Kharlampieva DD, Bobrovsky PA, Latsis IA, Manuvera VA, Babenko VV, Trukhan VM, Arseniev AS, Klinov DV, Lazarev VN.

Eur J Med Chem. 2019 Oct 15;180:143-153. doi: 10.1016/j.ejmech.2019.06.080. Epub 2019 Jul 4.

PMID:
31302447
3.

Escherichia coli bacteriophage Gostya9, representing a new species within the genus T5virus.

Golomidova AK, Kulikov EE, Babenko VV, Ivanov PA, Prokhorov NS, Letarov AV.

Arch Virol. 2019 Mar;164(3):879-884. doi: 10.1007/s00705-018-4113-2. Epub 2018 Dec 1.

PMID:
30506471
4.

Structure and gene cluster of the O antigen of Escherichia coli F17, a candidate for a new O-serogroup.

Knirel YA, Ivanov PA, Senchenkova SN, Naumenko OI, Ovchinnikova OO, Shashkov AS, Golomidova AK, Babenko VV, Kulikov EE, Letarov AV.

Int J Biol Macromol. 2019 Mar 1;124:389-395. doi: 10.1016/j.ijbiomac.2018.11.149. Epub 2018 Nov 15.

PMID:
30448500
5.

Sharp water column stratification with an extremely dense microbial population in a small meromictic lake, Trekhtzvetnoe.

Savvichev AS, Babenko VV, Lunina ON, Letarova MA, Boldyreva DI, Veslopolova EF, Demidenko NA, Kokryatskaya NM, Krasnova ED, Gaisin VA, Kostryukova ES, Gorlenko VM, Letarov AV.

Environ Microbiol. 2018 Oct;20(10):3784-3797. doi: 10.1111/1462-2920.14384. Epub 2018 Oct 5.

PMID:
30117254
6.

O-Antigens of Escherichia coli Strains O81 and HS3-104 Are Structurally and Genetically Related, Except O-Antigen Glucosylation in E. coli HS3-104.

Zdorovenko EL, Wang Y, Shashkov AS, Chen T, Ovchinnikova OG, Liu B, Golomidova AK, Babenko VV, Letarov AV, Knirel YA.

Biochemistry (Mosc). 2018 May;83(5):534-541. doi: 10.1134/S0006297918050061.

7.

Discovery of novel antimicrobial peptides: A transcriptomic study of the sea anemone Cnidopus japonicus.

Grafskaia EN, Polina NF, Babenko VV, Kharlampieva DD, Bobrovsky PA, Manuvera VA, Farafonova TE, Anikanov NA, Lazarev VN.

J Bioinform Comput Biol. 2018 Apr;16(2):1840006. doi: 10.1142/S0219720018400061. Epub 2018 Jan 3.

PMID:
29361893
8.

Complete Genome Sequence of Bacteriophage St11Ph5, Which Infects Uropathogenic Escherichia coli Strain up11.

Golomidova AK, Kulikov EE, Babenko VV, Kostryukova ES, Letarov AV.

Genome Announc. 2018 Jan 11;6(2). pii: e01371-17. doi: 10.1128/genomeA.01371-17.

9.

Draft genomes of Enterococcus faecium strains isolated from human feces before and after eradication therapy against Helicobacter pylori.

Prianichnikov NA, Malakhova MV, Babenko VV, Larin AK, Olekhnovich EI, Starikova EV, Chuvelev DI, Glushchenko OE, Samoilov AE, Manolov AI, Kovarsky BA, Tyakht AV, Pavlenko AV, Ilina EN, Kostryukova ES.

Data Brief. 2017 Nov 27;16:511-514. doi: 10.1016/j.dib.2017.11.069. eCollection 2018 Feb.

10.

Identification of unusual peptides with new Cys frameworks in the venom of the cold-water sea anemone Cnidopus japonicus.

Babenko VV, Mikov AN, Manuvera VA, Anikanov NA, Kovalchuk SI, Andreev YA, Logashina YA, Kornilov DA, Manolov AI, Sanamyan NP, Sanamyan KE, Kostryukova ES, Kozlov SA, Grishin EV, Govorun VM, Lazarev VN.

Sci Rep. 2017 Nov 6;7(1):14534. doi: 10.1038/s41598-017-14961-1.

11.

Genome analysis of E. coli isolated from Crohn's disease patients.

Rakitina DV, Manolov AI, Kanygina AV, Garushyants SK, Baikova JP, Alexeev DG, Ladygina VG, Kostryukova ES, Larin AK, Semashko TA, Karpova IY, Babenko VV, Ismagilova RK, Malanin SY, Gelfand MS, Ilina EN, Gorodnichev RB, Lisitsyna ES, Aleshkin GI, Scherbakov PL, Khalif IL, Shapina MV, Maev IV, Andreev DN, Govorun VM.

BMC Genomics. 2017 Jul 19;18(1):544. doi: 10.1186/s12864-017-3917-x.

12.

Analysis of Gut Microbiota in Patients with Parkinson's Disease.

Petrov VA, Saltykova IV, Zhukova IA, Alifirova VM, Zhukova NG, Dorofeeva YB, Tyakht AV, Kovarsky BA, Alekseev DG, Kostryukova ES, Mironova YS, Izhboldina OP, Nikitina MA, Perevozchikova TV, Fait EA, Babenko VV, Vakhitova MT, Govorun VM, Sazonov AE.

Bull Exp Biol Med. 2017 Apr;162(6):734-737. doi: 10.1007/s10517-017-3700-7. Epub 2017 Apr 20.

PMID:
28429209
13.

Microfluidic droplet platform for ultrahigh-throughput single-cell screening of biodiversity.

Terekhov SS, Smirnov IV, Stepanova AV, Bobik TV, Mokrushina YA, Ponomarenko NA, Belogurov AA Jr, Rubtsova MP, Kartseva OV, Gomzikova MO, Moskovtsev AA, Bukatin AS, Dubina MV, Kostryukova ES, Babenko VV, Vakhitova MT, Manolov AI, Malakhova MV, Kornienko MA, Tyakht AV, Vanyushkina AA, Ilina EN, Masson P, Gabibov AG, Altman S.

Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):2550-2555. doi: 10.1073/pnas.1621226114. Epub 2017 Feb 15.

14.

Data on gut metagenomes of the patients with Helicobacter pylori infection before and after the antibiotic therapy.

Glushchenko OE, Samoilov AE, Olekhnovich EI, Kovarsky BA, Tyakht AV, Pavlenko AV, Babenko VV, Larin AK, Kostryukova ES, Malakhova MV, Ilina EN, Abdulkhakov RA, Safina DI, Grigoryeva TV, Abdulkhakov SR, Govorun VM.

Data Brief. 2017 Jan 17;11:68-71. doi: 10.1016/j.dib.2017.01.007. eCollection 2017 Apr.

15.

Correction for Sotnikova et al., Complete Genome Sequence of Mycobacterium bovis Strain BCG-1 (Russia).

Sotnikova EA, Shitikov EA, Malakhova MV, Babenko VV, Kostryukova ES, Ilina EN, Atrasheuskaya AV, Ignatyev GM, Vinokurova NV, Gorbachyov VY.

Genome Announc. 2016 Jun 2;4(3). pii: e00535-16. doi: 10.1128/genomeA.00535-16. No abstract available.

16.

[Spatial Frequencies Priority in Attentional Capture].

Babenko VV, Yavna DV, Nemchenko EI.

Zh Vyssh Nerv Deiat Im I P Pavlova. 2015 Nov-Dec;65(6):706-10. Russian.

PMID:
26841658
17.

[Primary candidate rna biomarker screening by RNA-seq for prostate cancer diagnostics].

Nikitina AS, Babenko VV, Babalyan KA, Vasiliev AO, Govorov AV, Prilepskaya EA, Danilenko SA, Selezneva OV, Sharova EI.

Biomed Khim. 2015 Nov-Dec;61(6):781-4. doi: 10.18097/PBMC20156106781. Russian.

PMID:
26716753
18.

Specificity of brain reactions to second-order visual stimuli.

Babenko VV, Ermakov PN.

Vis Neurosci. 2015 Jan;32:E011. doi: 10.1017/S0952523815000085.

PMID:
26241905
19.

Complete Genome Sequence of an Enterotoxigenic Bacteroides fragilis Clinical Isolate.

Nikitina AS, Kharlampieva DD, Babenko VV, Shirokov DA, Vakhitova MT, Manolov AI, Shkoporov AN, Taraskina AE, Manuvera VA, Lazarev VN, Kostryukova ES.

Genome Announc. 2015 May 7;3(3). pii: e00450-15. doi: 10.1128/genomeA.00450-15.

20.

Structure of the capsular polysaccharide of Acinetobacter baumannii 1053 having the KL91 capsule biosynthesis gene locus.

Shashkov AS, Shneider MM, Senchenkova SN, Popova AV, Nikitina AS, Babenko VV, Kostryukova ES, Miroshnikov KA, Volozhantsev NV, Knirel YA.

Carbohydr Res. 2015 Mar 2;404:79-82. doi: 10.1016/j.carres.2014.11.013. Epub 2014 Nov 29.

PMID:
25665782
21.

Isolation of single Chlamydia-infected cells using laser microdissection.

Podgorny OV, Polina NF, Babenko VV, Karpova IY, Kostryukova ES, Govorun VM, Lazarev VN.

J Microbiol Methods. 2015 Feb;109:123-8. doi: 10.1016/j.mimet.2014.12.018. Epub 2014 Dec 26.

PMID:
25546842
22.

Human gut microbiota community structures in urban and rural populations in Russia.

Tyakht AV, Kostryukova ES, Popenko AS, Belenikin MS, Pavlenko AV, Larin AK, Karpova IY, Selezneva OV, Semashko TA, Ospanova EA, Babenko VV, Maev IV, Cheremushkin SV, Kucheryavyy YA, Shcherbakov PL, Grinevich VB, Efimov OI, Sas EI, Abdulkhakov RA, Abdulkhakov SR, Lyalyukova EA, Livzan MA, Vlassov VV, Sagdeev RZ, Tsukanov VV, Osipenko MF, Kozlova IV, Tkachev AV, Sergienko VI, Alexeev DG, Govorun VM.

Nat Commun. 2013;4:2469. doi: 10.1038/ncomms3469.

23.

[Using Kirlian photography method for risk assessment of the thyroid gland pathology development in adults].

Pisots'ka LA, Kul'kina OA, Abaiantseva TO, Shostak LV, Babenko VV, Zaruvins'ka OIu.

Lik Sprava. 2010 Jul-Sep;(5-6):87-9. Ukrainian.

PMID:
21488372
24.

[Dipole sources localization of late components of event-related potentials during effective and ineffective visual search].

Ermakov PN, Babenko VV, Bozhinskaia MA.

Zh Vyssh Nerv Deiat Im I P Pavlova. 2009 Jul-Aug;59(4):411-20. Russian.

PMID:
19795803
25.

Reflection of the effectiveness of heterosensory integration in measures of event-linked potentials.

Babenko VV, Kul'ba SN, Kotova MY.

Neurosci Behav Physiol. 2008 Jun;38(5):523-32. doi: 10.1007/s11055-008-9012-7. Epub 2008 Jul 8.

PMID:
18607746
26.

[Representation of heterosensory integration effectiveness in parameters of event-related potentials].

Babenko VV, Kul'ba SN, Kotova MIu.

Zh Vyssh Nerv Deiat Im I P Pavlova. 2007 Jul-Aug;57(4):407-18. Russian.

PMID:
17944099
27.

[Using of kirlean-graphic express-method for appropriate prescription of medications].

Pisots'ka LA, Mintser OP, Shostak LV, Abaiantseva TO, Babenko VV, Kul'kina OA, Mintser VO.

Lik Sprava. 2006 Jun;(4):30-3. Ukrainian.

PMID:
17100236
28.

[Problem of visual segmentation and spatial-frequency filtration].

Babenko VV, Kuraev GA, Kul'ba SN.

Ross Fiziol Zh Im I M Sechenova. 2003 Oct;89(10):1300-9. Russian.

PMID:
14758654
29.

[Size as a parameter for tuning visual attention].

Babenko VV, Kuraev GA, Kul'ba SN.

Zh Vyssh Nerv Deiat Im I P Pavlova. 2001 Sep-Oct;51(5):643-5. Russian.

PMID:
11764526
30.

[Dependence of the threshold of sinusoidal grating displacement on its spatial frequency characteristics].

Kuraev GA, Babenko VV.

Fiziol Cheloveka. 2000 Jul-Aug;26(4):30-7. Russian. No abstract available.

PMID:
11004747
31.

[The visual mechanisms selective for the total extent of a periodic pattern].

Babenko VV.

Fiziol Cheloveka. 1999 Mar-Apr;25(2):30-5. Russian. No abstract available.

PMID:
10500350
32.

Integrated databases and computer systems for studying eukaryotic gene expression.

Kolchanov NA, Ponomarenko MP, Frolov AS, Ananko EA, Kolpakov FA, Ignatieva EV, Podkolodnaya OA, Goryachkovskaya TN, Stepanenko IL, Merkulova TI, Babenko VV, Ponomarenko YV, Kochetov AV, Podkolodny NL, Vorobiev DV, Lavryushev SV, Grigorovich DA, Kondrakhin YV, Milanesi L, Wingender E, Solovyev V, Overton GC.

Bioinformatics. 1999 Jul-Aug;15(7-8):669-86.

PMID:
10487874
33.

[Evoked potentials to sound in the visual cortex in the cat].

Babenko VV, Chipizubova MK.

Zh Vyssh Nerv Deiat Im I P Pavlova. 1983 Jul-Aug;33(4):717-22. Russian.

PMID:
6624256
34.

[Changes in the configuration of primary responses of the visual cortex upon increasing the intensity of background acoustic stimuli over threshold values].

Filimonov VK, Babenko VV.

Zh Vyssh Nerv Deiat Im I P Pavlova. 1981 Jul-Aug;31(4):852-4. Russian. No abstract available.

PMID:
7303908
35.

[Stabilization of longitudinal vortices by the cutaneous integument of dolphins].

Iurchenko NF, Babenko VV.

Biofizika. 1980 Mar-Apr;25(2):299-304. Russian. No abstract available.

PMID:
7370342
36.

[Epidemiological significance of the study of enzymatic activity of Shigella sonnei].

Lazareva ZA, Bibergan EI, Kruialiachenko AI, Babenko VV, Shkoda VF.

Lab Delo. 1973;5:315-6. Russian. No abstract available.

PMID:
4129173

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