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Respiratory viral surveillance of healthcare personnel and patients at an adult long-term care facility.

O'Neil CA, Kim L, Prill MM, Talbot HK, Whitaker B, Sakthivel SK, Zhang Y, Zhang J, Tong S, Stone N, Garg S, Gerber SI, Babcock HM.

Infect Control Hosp Epidemiol. 2019 Sep 25:1-4. doi: 10.1017/ice.2019.207. [Epub ahead of print]


Respiratory Protection of Health Care Personnel to Prevent Respiratory Viral Transmission.

Talbot TR, Babcock HM.

JAMA. 2019 Sep 3;322(9):817-819. doi: 10.1001/jama.2019.11644. No abstract available.


Multiplexed detection of RNA using MERFISH and branched DNA amplification.

Xia C, Babcock HP, Moffitt JR, Zhuang X.

Sci Rep. 2019 May 22;9(1):7721. doi: 10.1038/s41598-019-43943-8.


Publisher Correction: Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software.

Sage D, Pham TA, Babcock H, Lukes T, Pengo T, Chao J, Velmurugan R, Herbert A, Agrawal A, Colabrese S, Wheeler A, Archetti A, Rieger B, Ober R, Hagen GM, Sibarita JB, Ries J, Henriques R, Unser M, Holden S.

Nat Methods. 2019 Jun;16(6):561. doi: 10.1038/s41592-019-0453-4.


Imaging-based pooled CRISPR screening reveals regulators of lncRNA localization.

Wang C, Lu T, Emanuel G, Babcock HP, Zhuang X.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10842-10851. doi: 10.1073/pnas.1903808116. Epub 2019 May 13.


Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software.

Sage D, Pham TA, Babcock H, Lukes T, Pengo T, Chao J, Velmurugan R, Herbert A, Agrawal A, Colabrese S, Wheeler A, Archetti A, Rieger B, Ober R, Hagen GM, Sibarita JB, Ries J, Henriques R, Unser M, Holden S.

Nat Methods. 2019 May;16(5):387-395. doi: 10.1038/s41592-019-0364-4. Epub 2019 Apr 8. Erratum in: Nat Methods. 2019 Jun;16(6):561.


Continuing to Move the Needle on Health Care Personnel Influenza Vaccination Rates.

Babcock HM.

JAMA Netw Open. 2018 Jun 1;1(2):e180144. doi: 10.1001/jamanetworkopen.2018.0144. No abstract available.


Blind sparse inpainting reveals cytoskeletal filaments with sub-Nyquist localization.

Wang Y, Jia S, Zhang HF, Kim D, Babcock H, Zhuang X, Ying L.

Optica. 2017 Oct 20;4(10):1277-1284. doi: 10.1364/OPTICA.4.001277. Epub 2017 Oct 12.


Differences in mortality between infections due to extended-spectrum-beta-lactamase-producing Klebsiella pneumoniae and Escherichia coli.

Burnham JP, Kwon JH, Olsen MA, Babcock HM, Kollef MH.

Infect Control Hosp Epidemiol. 2018 Sep;39(9):1138-1139. doi: 10.1017/ice.2018.142. Epub 2018 Jul 2. No abstract available.


Infectious Diseases Consultation Reduces 30-Day and 1-Year All-Cause Mortality for Multidrug-Resistant Organism Infections.

Burnham JP, Olsen MA, Stwalley D, Kwon JH, Babcock HM, Kollef MH.

Open Forum Infect Dis. 2018 Mar 15;5(3):ofy026. doi: 10.1093/ofid/ofy026. eCollection 2018 Mar.


Readmissions With Multidrug-Resistant Infection in Patients With Prior Multidrug Resistant Infection.

Burnham JP, Kwon JH, Olsen MA, Babcock HM, Kollef MH.

Infect Control Hosp Epidemiol. 2018 Jan;39(1):12-19. doi: 10.1017/ice.2017.254. Epub 2017 Dec 17.


Preventing Respiratory Viral Transmission in Long-Term Care: Knowledge, Attitudes, and Practices of Healthcare Personnel.

O'Neil CA, Kim L, Prill MM, Stone ND, Garg S, Talbot HK, Babcock HM.

Infect Control Hosp Epidemiol. 2017 Dec;38(12):1449-1456. doi: 10.1017/ice.2017.232. Epub 2017 Nov 27.


Characterization of Aerosols Generated During Patient Care Activities.

O'Neil CA, Li J, Leavey A, Wang Y, Hink M, Wallace M, Biswas P, Burnham CD, Babcock HM; Centers for Disease Control and Prevention Epicenters Program.

Clin Infect Dis. 2017 Oct 15;65(8):1335-1341. doi: 10.1093/cid/cix535.


ICD-9-CM Coding for Multidrug Resistant Infection Correlates Poorly With Microbiologically Confirmed Multidrug Resistant Infection.

Burnham JP, Kwon JH, Babcock HM, Olsen MA, Kollef MH.

Infect Control Hosp Epidemiol. 2017 Nov;38(11):1381-1383. doi: 10.1017/ice.2017.192. Epub 2017 Sep 5. No abstract available.


Iterative expansion microscopy.

Chang JB, Chen F, Yoon YG, Jung EE, Babcock H, Kang JS, Asano S, Suk HJ, Pak N, Tillberg PW, Wassie AT, Cai D, Boyden ES.

Nat Methods. 2017 Jun;14(6):593-599. doi: 10.1038/nmeth.4261. Epub 2017 Apr 17.


The DDR at telomeres lacking intact shelterin does not require substantial chromatin decompaction.

Timashev LA, Babcock H, Zhuang X, de Lange T.

Genes Dev. 2017 Mar 15;31(6):578-589. doi: 10.1101/gad.294108.116. Epub 2017 Apr 5.


Analyzing Single Molecule Localization Microscopy Data Using Cubic Splines.

Babcock HP, Zhuang X.

Sci Rep. 2017 Apr 3;7(1):552. doi: 10.1038/s41598-017-00622-w.


Putting the Pieces Together: Clinically Relevant Genetic and Genomic Resources for Hospitalists and Neonatologists.

Miller R, Khromykh A, Babcock H, Jenevein C, Solomon BD.

Hosp Pediatr. 2017 Feb;7(2):108-114. doi: 10.1542/hpeds.2016-0135.


Rapid MRSA PCR on respiratory specimens from ventilated patients with suspected pneumonia: a tool to facilitate antimicrobial stewardship.

Trevino SE, Pence MA, Marschall J, Kollef MH, Babcock HM, Burnham CD.

Eur J Clin Microbiol Infect Dis. 2017 May;36(5):879-885. doi: 10.1007/s10096-016-2876-5. Epub 2016 Dec 21.


Comparative Study on the Size Distributions, Respiratory Deposition, and Transport of Particles Generated from Commonly Used Medical Nebulizers.

Wang Y, Li J, Leavey A, O'Neil C, Babcock HM, Biswas P.

J Aerosol Med Pulm Drug Deliv. 2017 Apr;30(2):132-140. doi: 10.1089/jamp.2016.1340. Epub 2016 Dec 15.


Interrater Reliability of Surveillance for Ventilator-Associated Events and Pneumonia.

Kerlin MP, Trick WE, Anderson DJ, Babcock HM, Lautenbach E, Gueret R, Klompas M.

Infect Control Hosp Epidemiol. 2017 Feb;38(2):172-178. doi: 10.1017/ice.2016.262. Epub 2016 Nov 8.


A targeted educational intervention to reduce ventilator-associated complications.

Nolley EP, Trevino SE, Babcock HM, Kollef MH.

Am J Infect Control. 2016 Nov 1;44(11):1406-1407. doi: 10.1016/j.ajic.2016.03.052. Epub 2016 May 26.


High-throughput single-cell gene-expression profiling with multiplexed error-robust fluorescence in situ hybridization.

Moffitt JR, Hao J, Wang G, Chen KH, Babcock HP, Zhuang X.

Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):11046-51. doi: 10.1073/pnas.1612826113. Epub 2016 Sep 13.


X-Linked Candidate Genes for a Ciliopathy-Like Disorder.

Pavey AR, Vilboux T, Babcock HE, Ahronovich M, Solomon BD.

Mol Syndromol. 2016 Apr;7(1):37-42. doi: 10.1159/000444666. Epub 2016 Mar 16.


The Impact of Nighttime Intensivists on Medical Intensive Care Unit Infection-Related Indicators.

Trivedi A, McMullen KM, Babcock HM, Kollef MH.

Infect Control Hosp Epidemiol. 2016 Mar;37(3):352-4. doi: 10.1017/ice.2015.304. Epub 2015 Dec 14.


Mapping Synaptic Input Fields of Neurons with Super-Resolution Imaging.

Sigal YM, Speer CM, Babcock HP, Zhuang X.

Cell. 2015 Oct 8;163(2):493-505. doi: 10.1016/j.cell.2015.08.033. Epub 2015 Oct 1.


Perceptions and behaviours of infectious diseases physicians when managing urinary tract infections due to MDR organisms.

Trevino SE, Babcock HM, Henderson JP, Lane MA, Beekmann SE, Polgreen PM, Marschall J.

J Antimicrob Chemother. 2015 Dec;70(12):3397-400. doi: 10.1093/jac/dkv271. Epub 2015 Sep 7.


Randomized Controlled Trial to Determine the Impact of Probiotic Administration on Colonization With Multidrug-Resistant Organisms in Critically Ill Patients.

Kwon JH, Bommarito KM, Reske KA, Seiler SM, Hink T, Babcock HM, Kollef MH, Fraser VJ, Burnham CA, Dubberke ER; Centers for Disease Control and Prevention (CDC) Prevention Epicenters.

Infect Control Hosp Epidemiol. 2015 Dec;36(12):1451-4. doi: 10.1017/ice.2015.195. Epub 2015 Aug 27.


Clinician Beliefs and Attitudes Regarding Use of Respiratory Protective Devices and Surgical Masks for Influenza.

Pillai SK, Beekmann SE, Babcock HM, Pavia AT, Koonin LM, Polgreen PM.

Health Secur. 2015 Jul-Aug;13(4):274-80. doi: 10.1089/hs.2015.0011. Epub 2015 Jul 14.


Low correlation between self-report and medical record documentation of urinary tract infection symptoms.

Echaiz JF, Cass C, Henderson JP, Babcock HM, Marschall J.

Am J Infect Control. 2015 Sep 1;43(9):983-6. doi: 10.1016/j.ajic.2015.04.208. Epub 2015 Jun 16.


Correlative stochastic optical reconstruction microscopy and electron microscopy.

Kim D, Deerinck TJ, Sigal YM, Babcock HP, Ellisman MH, Zhuang X.

PLoS One. 2015 Apr 15;10(4):e0124581. doi: 10.1371/journal.pone.0124581. eCollection 2015.


Surveillance versus clinical adjudication: differences persist with new ventilator-associated event definition.

McMullen KM, Boyer AF, Schoenberg N, Babcock HM, Micek ST, Kollef MH.

Am J Infect Control. 2015 Jun;43(6):589-91. doi: 10.1016/j.ajic.2015.03.004. Epub 2015 Apr 3.


Advancing the competency of infection preventionists.

Gase KA, Leone C, Khoury R, Babcock HM.

Am J Infect Control. 2015 Apr 1;43(4):370-9. doi: 10.1016/j.ajic.2015.01.005. Epub 2015 Feb 24.


Developmental mechanism of the periodic membrane skeleton in axons.

Zhong G, He J, Zhou R, Lorenzo D, Babcock HP, Bennett V, Zhuang X.

Elife. 2014 Dec 23;3. doi: 10.7554/eLife.04581.


Is accounting for acute care beds enough? A proposal for measuring infection prevention personnel resources.

Gase KA, Babcock HM.

Am J Infect Control. 2015 Feb;43(2):165-6. doi: 10.1016/j.ajic.2014.10.013. Epub 2014 Dec 3.


The preventability of ventilator-associated events. The CDC Prevention Epicenters Wake Up and Breathe Collaborative.

Klompas M, Anderson D, Trick W, Babcock H, Kerlin MP, Li L, Sinkowitz-Cochran R, Ely EW, Jernigan J, Magill S, Lyles R, O'Neil C, Kitch BT, Arrington E, Balas MC, Kleinman K, Bruce C, Lankiewicz J, Murphy MV, E Cox C, Lautenbach E, Sexton D, Fraser V, Weinstein RA, Platt R; CDC Prevention Epicenters.

Am J Respir Crit Care Med. 2015 Feb 1;191(3):292-301. doi: 10.1164/rccm.201407-1394OC.


Baseline hypovitaminosis D is not associated with poor clinical outcomes in osteoarticular infections.

Marschall J, Lewis JW, Warren DK, Babcock HM, Barrack RL, Fraser VJ.

Int J Infect Dis. 2014 Sep;26:98-102. doi: 10.1016/j.ijid.2014.05.004. Epub 2014 Jul 12.


aldh7a1 regulates eye and limb development in zebrafish.

Babcock HE, Dutta S, Alur RP, Brocker C, Vasiliou V, Vitale S, Abu-Asab M, Brooks BP.

PLoS One. 2014 Jul 8;9(7):e101782. doi: 10.1371/journal.pone.0101782. eCollection 2014.


Outpatient parenteral antimicrobial therapy practices among adult infectious disease physicians.

Lane MA, Marschall J, Beekmann SE, Polgreen PM, Banerjee R, Hersh AL, Babcock HM.

Infect Control Hosp Epidemiol. 2014 Jul;35(7):839-44. doi: 10.1086/676859. Epub 2014 May 9.


A prospective evaluation of ventilator-associated conditions and infection-related ventilator-associated conditions.

Boyer AF, Schoenberg N, Babcock H, McMullen KM, Micek ST, Kollef MH.

Chest. 2015 Jan;147(1):68-81. doi: 10.1378/chest.14-0544.


The importance of influenza vaccination.

Babcock HM, Jernigan JA, Relman DA.

JAMA Intern Med. 2014 Apr;174(4):644-5. doi: 10.1001/jamainternmed.2013.11174. No abstract available.


Fast compressed sensing analysis for super-resolution imaging using L1-homotopy.

Babcock HP, Moffitt JR, Cao Y, Zhuang X.

Opt Express. 2013 Nov 18;21(23):28583-96. doi: 10.1364/OE.21.028583.


Development of a standardized process improvement protocol to address elevated health care-associated infection rates on an incented quality scorecard.

Yegge JA, Gase KA, Hopkins-Broyles D, Leone CL, Trovillion EW, Babcock HM.

Am J Infect Control. 2014 Feb;42(2):185-9. doi: 10.1016/j.ajic.2013.09.020.


Daptomycin versus vancomycin for osteoarticular infections due to methicillin-resistant Staphylococcus aureus (MRSA): a nested case-control study.

Liang SY, Khair HN, McDonald JR, Babcock HM, Marschall J.

Eur J Clin Microbiol Infect Dis. 2014 Apr;33(4):659-64. doi: 10.1007/s10096-013-2001-y. Epub 2013 Nov 3.


A successful strategy for increasing the influenza vaccination rate of healthcare workers without a mandatory policy outside of the United States: a multifaceted intervention in a Japanese tertiary care center.

Honda H, Sato Y, Yamazaki A, Padival S, Kumagai A, Babcock H.

Infect Control Hosp Epidemiol. 2013 Nov;34(11):1194-200. doi: 10.1086/673452. Epub 2013 Sep 19.


Mandatory vaccination.

Woeltje KF, Babcock HM.

CMAJ. 2013 Aug 6;185(11):983-4. doi: 10.1503/cmaj.113-2124. No abstract available.


Current management of prosthetic joint infections in adults: results of an Emerging Infections Network survey.

Marschall J, Lane MA, Beekmann SE, Polgreen PM, Babcock HM.

Int J Antimicrob Agents. 2013 Mar;41(3):272-7. doi: 10.1016/j.ijantimicag.2012.10.023. Epub 2013 Jan 9.


Commentary. Update on emerging infections : news from the Centers for Disease Control and Prevention.

Liang SY, Babcock HM.

Ann Emerg Med. 2012 Nov;60(5):628-31. doi: 10.1016/j.annemergmed.2012.08.006. No abstract available.


The use of live attenuated influenza vaccine (LAIV) in healthcare personnel (HCP): guidance from the Society for Healthcare Epidemiology of America (SHEA).

Talbot TR, Babcock H, Cotton D, Maragakis LL, Poland GA, Septimus EJ, Tapper ML, Weber DJ.

Infect Control Hosp Epidemiol. 2012 Oct;33(10):981-3. doi: 10.1086/667772.


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