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A first insight into genetic diversity of Mycobacterium bovis isolated from extrapulmonary tuberculosis patients in South Tunisia assessed by spoligotyping and MIRU VNTR.

Siala M, Cassan C, Smaoui S, Kammoun S, Marouane C, Godreuil S, Hachicha S, Mhiri E, Slim L, Gamara D, Messadi-Akrout F, Bañuls AL.

PLoS Negl Trop Dis. 2019 Sep 18;13(9):e0007707. doi: 10.1371/journal.pntd.0007707. eCollection 2019 Sep.


Spread of NDM-5 and OXA-181 carbapenemase-producing Escherichia coli in Chad.

Ouchar Mahamat O, Lounnas M, Hide M, Tidjani A, Benavides J, Diack A, Somasse C, Gamougam K, Carrière C, Decré D, Bañuls AL, Jean-Pierre H, Dumont Y, Compain F, Godreuil S.

Antimicrob Agents Chemother. 2019 Aug 12. pii: AAC.00646-19. doi: 10.1128/AAC.00646-19. [Epub ahead of print]


A single amino acid substitution (H451Y) in Leishmania calcium-dependent kinase SCAMK confers high tolerance and resistance to antimony.

Vergnes B, Gazanion E, Mariac C, Du Manoir M, Sollelis L, Lopez-Rubio JJ, Sterkers Y, Bañuls AL.

J Antimicrob Chemother. 2019 Jul 31. pii: dkz334. doi: 10.1093/jac/dkz334. [Epub ahead of print]


Diversity and Ecology of Sand Flies (Diptera: Psychodidae), Potential Vectors of Leishmania in the Quang Ninh Province, Vietnam.

Vu NS, Tran SH, Tran PV, Tran TC, Tran DN, Dang AD, Nguyen YT, Vu LT, Ngo PK, Nguyen HV, Cassan C, Nguyen CV, Rahola N, Bañuls AL.

J Med Entomol. 2019 Jul 26. pii: tjz129. doi: 10.1093/jme/tjz129. [Epub ahead of print]


Molecular Diagnosis of Drug-Resistant Tuberculosis; A Literature Review.

Nguyen TNA, Anton-Le Berre V, Bañuls AL, Nguyen TVA.

Front Microbiol. 2019 Apr 16;10:794. doi: 10.3389/fmicb.2019.00794. eCollection 2019. Review.


High prevalence and characterization of extended-spectrum ß-lactamase producing Enterobacteriaceae in Chadian hospitals.

Ouchar Mahamat O, Lounnas M, Hide M, Dumont Y, Tidjani A, Kamougam K, Abderrahmane M, Benavides J, Solassol J, Bañuls AL, Jean-Pierre H, Carrière C, Godreuil S.

BMC Infect Dis. 2019 Feb 28;19(1):205. doi: 10.1186/s12879-019-3838-1.


Insights into the processes that drive the evolution of drug resistance in Mycobacterium tuberculosis.

Nguyen QH, Contamin L, Nguyen TVA, Bañuls AL.

Evol Appl. 2018 Jun 21;11(9):1498-1511. doi: 10.1111/eva.12654. eCollection 2018 Oct. Review.


Leishmania major and Trypanosoma lewisi infection in invasive and native rodents in Senegal.

Cassan C, Diagne CA, Tatard C, Gauthier P, Dalecky A, Bâ K, Kane M, Niang Y, Diallo M, Sow A, Brouat C, Bañuls AL.

PLoS Negl Trop Dis. 2018 Jun 29;12(6):e0006615. doi: 10.1371/journal.pntd.0006615. eCollection 2018 Jun.


Phlebotomus (Paraphlebotomus) chabaudi and Phlebotomus riouxi: closely related species or synonyms?

Lehrter V, Bañuls AL, Léger N, Rioux JA, Depaquit J.

Parasite. 2017;24:47. doi: 10.1051/parasite/2017050. Epub 2017 Dec 1.


High-throughput sequencing of kDNA amplicons for the analysis of Leishmania minicircles and identification of Neotropical species.

Kocher A, Valière S, Bañuls AL, Murienne J.

Parasitology. 2018 Apr;145(5):585-594. doi: 10.1017/S0031182017002013. Epub 2017 Nov 16.


Bedaquiline Resistance: Its Emergence, Mechanism, and Prevention.

Nguyen TVA, Anthony RM, Bañuls AL, Nguyen TVA, Vu DH, Alffenaar JC.

Clin Infect Dis. 2018 May 2;66(10):1625-1630. doi: 10.1093/cid/cix992.


iDNA screening: Disease vectors as vertebrate samplers.

Kocher A, de Thoisy B, Catzeflis F, Valière S, Bañuls AL, Murienne J.

Mol Ecol. 2017 Nov;26(22):6478-6486. doi: 10.1111/mec.14362. Epub 2017 Oct 20.


Emergence and spread of antibiotic resistance in West Africa : contributing factors and threat assessment.

Ouedraogo AS, Jean Pierre H, Bañuls AL, Ouédraogo R, Godreuil S.

Med Sante Trop. 2017 Jun 1;27(2):147-154. doi: 10.1684/mst.2017.0678. Review.


Quadruple-first line drug resistance in Mycobacterium tuberculosis in Vietnam: What can we learn from genes?

Nguyen HQ, Nguyen NV, Contamin L, Tran THT, Vu TT, Nguyen HV, Nguyen NLT, Nguyen ST, Dang AD, Bañuls AL, Nguyen VAT.

Infect Genet Evol. 2017 Jun;50:55-61. doi: 10.1016/j.meegid.2017.02.012. Epub 2017 Feb 23.


Ecology and morphological variations in wings of Phlebotomus ariasi (Diptera: Psychodidae) in the region of Roquedur (Gard, France): a geometric morphometrics approach.

Prudhomme J, Cassan C, Hide M, Toty C, Rahola N, Vergnes B, Dujardin JP, Alten B, Sereno D, Bañuls AL.

Parasit Vectors. 2016 Nov 14;9(1):578.


Transmission of Leishmania infantum in the Canine Leishmaniasis Focus of Mont-Rolland, Senegal: Ecological, Parasitological and Molecular Evidence for a Possible Role of Sergentomyia Sand Flies.

Senghor MW, Niang AA, Depaquit J, Ferté H, Faye MN, Elguero E, Gaye O, Alten B, Perktas U, Cassan C, Faye B, Bañuls AL.

PLoS Negl Trop Dis. 2016 Nov 2;10(11):e0004940. doi: 10.1371/journal.pntd.0004940. eCollection 2016 Nov.


Reproduction in Leishmania: A focus on genetic exchange.

Rougeron V, De Meeûs T, Bañuls AL.

Infect Genet Evol. 2017 Jun;50:128-132. doi: 10.1016/j.meegid.2016.10.013. Epub 2016 Oct 19. Review.


High Nasal Carriage Rate of Staphylococcus aureus Containing Panton-Valentine leukocidin- and EDIN-Encoding Genes in Community and Hospital Settings in Burkina Faso.

Ouedraogo AS, Dunyach-Remy C, Kissou A, Sanou S, Poda A, Kyelem CG, Solassol J, Bañuls AL, Van De Perre P, Ouédraogo R, Jean-Pierre H, Lavigne JP, Godreuil S.

Front Microbiol. 2016 Sep 13;7:1406. doi: 10.3389/fmicb.2016.01406. eCollection 2016.


Mycobacterium tuberculosis lineages and anti-tuberculosis drug resistance in reference hospitals across Viet Nam.

Nguyen VA, Bañuls AL, Tran TH, Pham KL, Nguyen TS, Nguyen HV, Nguyen NL, Nguyen NL, Dang DA, Marks GB, Choisy M.

BMC Microbiol. 2016 Jul 28;16(1):167. doi: 10.1186/s12866-016-0784-6.


Vector soup: high-throughput identification of Neotropical phlebotomine sand flies using metabarcoding.

Kocher A, Gantier JC, Gaborit P, Zinger L, Holota H, Valiere S, Dusfour I, Girod R, Bañuls AL, Murienne J.

Mol Ecol Resour. 2017 Mar;17(2):172-182. doi: 10.1111/1755-0998.12556. Epub 2016 Jul 12.


Evaluation of the SLOMYCO Sensititre(®) panel for testing the antimicrobial susceptibility of Mycobacterium marinum isolates.

Chazel M, Marchandin H, Keck N, Terru D, Carrière C, Ponsoda M, Jacomo V, Panteix G, Bouzinbi N, Bañuls AL, Choisy M, Solassol J, Aubry A, Godreuil S.

Ann Clin Microbiol Antimicrob. 2016 May 6;15:30. doi: 10.1186/s12941-016-0145-1.


Study of Leishmania pathogenesis in mice: experimental considerations.

Loeuillet C, Bañuls AL, Hide M.

Parasit Vectors. 2016 Mar 11;9:144. doi: 10.1186/s13071-016-1413-9. Review.


First insights into the genetic diversity and origin of Leishmania infantum in Mont Rolland (Thiès region, Senegal).

Cassan C, Dione MM, Dereure J, Diedhiou S, Bucheton B, Hide M, Kako C, Gaye O, Senghor M, Niang AA, Bañuls AL, Faye B.

Microbes Infect. 2016 Jun;18(6):412-420. doi: 10.1016/j.micinf.2016.02.003. Epub 2016 Mar 3.


Seasonal Dynamics of Phlebotomine Sand Fly Species Proven Vectors of Mediterranean Leishmaniasis Caused by Leishmania infantum.

Alten B, Maia C, Afonso MO, Campino L, Jiménez M, González E, Molina R, Bañuls AL, Prudhomme J, Vergnes B, Toty C, Cassan C, Rahola N, Thierry M, Sereno D, Bongiorno G, Bianchi R, Khoury C, Tsirigotakis N, Dokianakis E, Antoniou M, Christodoulou V, Mazeris A, Karakus M, Ozbel Y, Arserim SK, Erisoz Kasap O, Gunay F, Oguz G, Kaynas S, Tsertsvadze N, Tskhvaradze L, Giorgobiani E, Gramiccia M, Volf P, Gradoni L.

PLoS Negl Trop Dis. 2016 Feb 22;10(2):e0004458. doi: 10.1371/journal.pntd.0004458. eCollection 2016 Feb.


Genetic Diversity and Population Structure of Leishmania infantum from Southeastern France: Evaluation Using Multi-Locus Microsatellite Typing.

Pomares C, Marty P, Bañuls AL, Lemichez E, Pratlong F, Faucher B, Jeddi F, Moore S, Michel G, Aluru S, Piarroux R, Hide M.

PLoS Negl Trop Dis. 2016 Jan 25;10(1):e0004303. doi: 10.1371/journal.pntd.0004303. eCollection 2016 Jan.


Population structure of colonizing and invasive Staphylococcus aureus strains in northern Vietnam.

Ngoc Thi Vu B, J Jafari A, Aardema M, Kieu Thi Tran H, Ngoc Thi Nguyen D, Tuyet Dao T, Vu Nguyen T, Khanh Tran T, Kim Thi Nguyen C, Fox A, Bañuls AL, Thwaites G, Van Nguyen K, Wertheim HFL.

J Med Microbiol. 2016 Apr;65(4):298-305. doi: 10.1099/jmm.0.000220. Epub 2016 Jan 12.


Ecology and spatiotemporal dynamics of sandflies in the Mediterranean Languedoc region (Roquedur area, Gard, France).

Prudhomme J, Rahola N, Toty C, Cassan C, Roiz D, Vergnes B, Thierry M, Rioux JA, Alten B, Sereno D, Bañuls AL.

Parasit Vectors. 2015 Dec 18;8:642. doi: 10.1186/s13071-015-1250-2.


Comparison of Leishmania killicki (syn. L. tropica) and Leishmania tropica Population Structure in Maghreb by Microsatellite Typing.

Chaara D, Bañuls AL, Haouas N, Talignani L, Lami P, Mezhoud H, Harrat Z, Dedet JP, Babba H, Pratlong F.

PLoS Negl Trop Dis. 2015 Dec 8;9(12):e0004204. doi: 10.1371/journal.pntd.0004204. eCollection 2015 Dec.


Mycobacterium tuberculosis: ecology and evolution of a human bacterium.

Bañuls AL, Sanou A, Anh NT, Godreuil S.

J Med Microbiol. 2015 Nov;64(11):1261-9. Epub 2015 Jan 11. Review.


Reduced turn-around time for Mycobacterium tuberculosis drug susceptibility testing with a proportional agar microplate assay.

Nguyen VA, Nguyen HQ, Vu TT, Nguyen NA, Duong CM, Tran TH, Nguyen HV, Dang DA, Bañuls AL.

Clin Microbiol Infect. 2015 Dec;21(12):1084-92. doi: 10.1016/j.cmi.2015.08.024. Epub 2015 Sep 5.


Spatio-temporal Genetic Structuring of Leishmania major in Tunisia by Microsatellite Analysis.

Harrabi M, Bettaieb J, Ghawar W, Toumi A, Zaâtour A, Yazidi R, Chaâbane S, Chalghaf B, Hide M, Bañuls AL, Ben Salah A.

PLoS Negl Trop Dis. 2015 Aug 24;9(8):e0004017. doi: 10.1371/journal.pntd.0004017. eCollection 2015.


Sampling strategies for phlebotomine sand flies (Diptera: Psychodidae) in Europe.

Alten B, Ozbel Y, Ergunay K, Kasap OE, Cull B, Antoniou M, Velo E, Prudhomme J, Molina R, Bañuls AL, Schaffner F, Hendrickx G, Van Bortel W, Medlock JM.

Bull Entomol Res. 2015 Dec;105(6):664-78. doi: 10.1017/S0007485315000127. Epub 2015 Aug 14. Review.


Multilocus microsatellite typing of Leishmania infantum isolates in monitored Leishmania/HIV coinfected patients.

Tomás-Pérez M, Hide M, Riera C, Montoya L, Bañuls AL, Ribera E, Portús M, Fisa R.

Parasit Vectors. 2015 Jul 22;8:386. doi: 10.1186/s13071-015-0989-9.


Response to Tibayrenc et al.: can recombination in Leishmania parasites be so rare?

Rougeron V, De Meeûs T, Bañuls AL.

Trends Parasitol. 2015 Jul;31(7):280-1. No abstract available.


Complete mitochondrial genome of Lutzomyia (Nyssomyia) umbratilis (Diptera: Psychodidae), the main vector of Leishmania guyanensis.

Kocher A, Gantier JC, Holota H, Jeziorski C, Coissac E, Bañuls AL, Girod R, Gaborit P, Murienne J.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4219-4221. Epub 2015 May 22.


Identification of phlebotomine sand flies using one MALDI-TOF MS reference database and two mass spectrometer systems.

Mathis A, Depaquit J, Dvořák V, Tuten H, Bañuls AL, Halada P, Zapata S, Lehrter V, Hlavačková K, Prudhomme J, Volf P, Sereno D, Kaufmann C, Pflüger V, Schaffner F.

Parasit Vectors. 2015 May 10;8:266. doi: 10.1186/s13071-015-0878-2.


Multilocus microsatellite typing of Leishmania and clinical applications: a review.

Aluru S, Hide M, Michel G, Bañuls AL, Marty P, Pomares C.

Parasite. 2015;22:16. doi: 10.1051/parasite/2015016. Epub 2015 May 5. Review.


Evolutionary history of Leishmania killicki (synonymous Leishmania tropica) and taxonomic implications.

Chaara D, Ravel C, Bañuls A, Haouas N, Lami P, Talignani L, El Baidouri F, Jaouadi K, Harrat Z, Dedet JP, Babba H, Pratlong F.

Parasit Vectors. 2015 Apr 1;8:198. doi: 10.1186/s13071-015-0821-6.


Genetic evolution of Mycobacterium bovis causing tuberculosis in livestock and wildlife in France since 1978.

Hauer A, De Cruz K, Cochard T, Godreuil S, Karoui C, Henault S, Bulach T, Bañuls AL, Biet F, Boschiroli ML.

PLoS One. 2015 Feb 6;10(2):e0117103. doi: 10.1371/journal.pone.0117103. eCollection 2015.


A primer for Leishmania population genetic studies.

Rougeron V, De Meeûs T, Bañuls AL.

Trends Parasitol. 2015 Feb;31(2):52-9. doi: 10.1016/ Epub 2015 Jan 12. Review.


New microsatellite markers for multi-scale genetic studies on Phlebotomus ariasi Tonnoir, vector of Leishmania infantum in the Mediterranean area.

Prudhomme J, Toty C, Kasap OE, Rahola N, Vergnes B, Maia C, Campino L, Antoniou M, Jimenez M, Molina R, Cannet A, Alten B, Sereno D, Bañuls AL.

Acta Trop. 2015 Feb;142:79-85. doi: 10.1016/j.actatropica.2014.10.016. Epub 2014 Nov 1.


Mycobacterium bovis in Burkina Faso: epidemiologic and genetic links between human and cattle isolates.

Sanou A, Tarnagda Z, Kanyala E, Zingué D, Nouctara M, Ganamé Z, Combary A, Hien H, Dembele M, Kabore A, Meda N, Van de Perre P, Neveu D, Bañuls AL, Godreuil S.

PLoS Negl Trop Dis. 2014 Oct 2;8(10):e3142. doi: 10.1371/journal.pntd.0003142. eCollection 2014 Oct.


Methicillin-sensitive Staphylococcus aureus CC398 in intensive care unit, France.

Brunel AS, Bañuls AL, Marchandin H, Bouzinbi N, Morquin D, Jumas-Bilak E, Corne P.

Emerg Infect Dis. 2014 Sep;20(9):1511-5. doi: 10.3201/eid2009.130225.


Sacroiliitis secondary to catheter-related bacteremia due to Mycobacterium abscessus (sensu stricto).

Laurens C, Héry-Arnaud G, Chiron R, Oziol E, Jean-Pierre H, Bouzinbi N, Vande Perre P, Bañuls AL, Godreuil S.

Ann Clin Microbiol Antimicrob. 2014 Jan 30;13:9. doi: 10.1186/1476-0711-13-9.


Of parasites and men.

Bañuls AL, Thomas F, Renaud F.

Infect Genet Evol. 2013 Dec;20:61-70. doi: 10.1016/j.meegid.2013.08.005. Epub 2013 Aug 15. Review.


Rifampin-resistant Mycobacterium bovis BCG-induced disease in HIV-infected infant, Vietnam.

Hong DN, Huyen MN, Lan NT, Duong NH, Ngo VV, Ngoc DT, Huu KT, Nguyen T, Do Chau V, Marcy O, Van de Perre P, Bañuls AL, Godreuil S.

Emerg Infect Dis. 2013 Jul;19(7):1168-70. doi: 10.3201/eid1907.13-0025. No abstract available.


Parasitic genotypes appear to differ in leishmaniasis patients compared with asymptomatic related carriers.

Hide M, Marion E, Pomares C, Fisa R, Marty P, Bañuls AL.

Int J Parasitol. 2013 Apr;43(5):389-97. doi: 10.1016/j.ijpara.2012.12.008. Epub 2013 Feb 1.


DNAGear--a free software for spa type identification in Staphylococcus aureus.

AL-Tam F, Brunel AS, Bouzinbi N, Corne P, Bañuls AL, Shahbazkia HR.

BMC Res Notes. 2012 Nov 19;5:642. doi: 10.1186/1756-0500-5-642.


High prevalence of Beijing and EAI4-VNM genotypes among M. tuberculosis isolates in northern Vietnam: sampling effect, rural and urban disparities.

Nguyen VA, Choisy M, Nguyen DH, Tran TH, Pham KL, Thi Dinh PT, Philippe J, Nguyen TS, Ho ML, Van Tran S, Bañuls AL, Dang DA.

PLoS One. 2012;7(9):e45553. doi: 10.1371/journal.pone.0045553. Epub 2012 Sep 24.


Genetic diversity and population structure of Mycobacterium marinum: new insights into host and environmental specificities.

Broutin V, Bañuls AL, Aubry A, Keck N, Choisy M, Bernardet JF, Michel C, Raymond JC, Libert C, Barnaud A, Stragier P, Portaels F, Terru D, Belon C, Dereure O, Gutierrez C, Boschiroli ML, Van De Perre P, Cambau E, Godreuil S.

J Clin Microbiol. 2012 Nov;50(11):3627-34. doi: 10.1128/JCM.01274-12. Epub 2012 Sep 5.

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