Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 19

1.

Long noncoding RNA NEAT1 modulates immune cell functions and is suppressed in early onset myocardial infarction patients.

Gast M, Rauch B, Haghikia A, Nakagawa S, Haas J, Stroux A, Schmidt D, Schumann P, Weiss S, Jensen L, Kratzer A, Kraenkel N, Müller C, Börnigen D, Hirose T, Blankenberg S, Escher F, Kühl A, Kuss A, Meder B, Landmesser U, Zeller T, Poller W.

Cardiovasc Res. 2019 Mar 29. pii: cvz085. doi: 10.1093/cvr/cvz085. [Epub ahead of print]

PMID:
30924864
2.

Low Tristetraprolin Expression Is Associated with Lethal Prostate Cancer.

Gerke T, Beltran H, Wang X, Lee GM, Sboner A, Karnes RJ, Klein EA, Davicioni E, Yousefi K, Ross AE, Börnigen D, Huttenhower C, Mucci LA, Trock BJ, Sweeney CJ.

Cancer Epidemiol Biomarkers Prev. 2019 Mar;28(3):584-590. doi: 10.1158/1055-9965.EPI-18-0667. Epub 2018 Nov 12.

PMID:
30420441
3.

Alterations in oral bacterial communities are associated with risk factors for oral and oropharyngeal cancer.

Börnigen D, Ren B, Pickard R, Li J, Ozer E, Hartmann EM, Xiao W, Tickle T, Rider J, Gevers D, Franzosa EA, Davey ME, Gillison ML, Huttenhower C.

Sci Rep. 2017 Dec 15;7(1):17686. doi: 10.1038/s41598-017-17795-z.

4.

The challenges of genetic risk scores for the prediction of coronary heart disease.

Börnigen D, Karakas M, Zeller T.

Clin Chem Lab Med. 2017 Aug 28;55(10):1450-1452. doi: 10.1515/cclm-2017-0330. No abstract available.

5.

Systems Medicine as an Emerging Tool for Cardiovascular Genetics.

Haase T, Börnigen D, Müller C, Zeller T.

Front Cardiovasc Med. 2016 Aug 30;3:27. doi: 10.3389/fcvm.2016.00027. eCollection 2016. Review.

6.

Comparison of Cox Model Methods in A Low-dimensional Setting with Few Events.

Ojeda FM, Müller C, Börnigen D, Trégouët DA, Schillert A, Heinig M, Zeller T, Schnabel RB.

Genomics Proteomics Bioinformatics. 2016 Aug;14(4):235-43. doi: 10.1016/j.gpb.2016.03.006. Epub 2016 May 17.

7.

Computational Reconstruction of NFκB Pathway Interaction Mechanisms during Prostate Cancer.

Börnigen D, Tyekucheva S, Wang X, Rider JR, Lee GS, Mucci LA, Sweeney C, Huttenhower C.

PLoS Comput Biol. 2016 Apr 14;12(4):e1004820. doi: 10.1371/journal.pcbi.1004820. eCollection 2016 Apr.

8.

A reproducible approach to high-throughput biological data acquisition and integration.

Börnigen D, Moon YS, Rahnavard G, Waldron L, McIver L, Shafquat A, Franzosa EA, Miropolsky L, Sweeney C, Morgan XC, Garrett WS, Huttenhower C.

PeerJ. 2015 Mar 31;3:e791. doi: 10.7717/peerj.791. eCollection 2015.

9.

Disease gene prioritization using network and feature.

Xie B, Agam G, Balasubramanian S, Xu J, Gilliam TC, Maltsev N, Börnigen D.

J Comput Biol. 2015 Apr;22(4):313-23. doi: 10.1089/cmb.2015.0001.

10.

An integrative computational approach for prioritization of genomic variants.

Dubchak I, Balasubramanian S, Wang S, Cem M, Sulakhe D, Poliakov A, Börnigen D, Xie B, Taylor A, Ma J, Paciorkowski AR, Mirzaa GM, Dave P, Agam G, Xu J, Al-Gazali L, Mason CE, Ross ME, Maltsev N, Gilliam TC.

PLoS One. 2014 Dec 15;9(12):e114903. doi: 10.1371/journal.pone.0114903. eCollection 2014. Erratum in: PLoS One. 2015;10(4):e0124700. Meyden, Cem [corrected to Meydan, Cem].

11.

Lynx web services for annotations and systems analysis of multi-gene disorders.

Sulakhe D, Taylor A, Balasubramanian S, Feng B, Xie B, Börnigen D, Dave UJ, Foster IT, Gilliam TC, Maltsev N.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W473-7. doi: 10.1093/nar/gku517. Epub 2014 Jun 19.

12.

High-throughput translational medicine: challenges and solutions.

Sulakhe D, Balasubramanian S, Xie B, Berrocal E, Feng B, Taylor A, Chitturi B, Dave U, Agam G, Xu J, Börnigen D, Dubchak I, Gilliam TC, Maltsev N.

Adv Exp Med Biol. 2014;799:39-67. doi: 10.1007/978-1-4614-8778-4_3. Review.

PMID:
24292961
13.

Lynx: a database and knowledge extraction engine for integrative medicine.

Sulakhe D, Balasubramanian S, Xie B, Feng B, Taylor A, Wang S, Berrocal E, Dave U, Xu J, Börnigen D, Gilliam TC, Maltsev N.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1007-12. doi: 10.1093/nar/gkt1166. Epub 2013 Nov 21.

14.

PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes.

Segata N, Börnigen D, Morgan XC, Huttenhower C.

Nat Commun. 2013;4:2304. doi: 10.1038/ncomms3304.

15.

Concordance of gene expression in human protein complexes reveals tissue specificity and pathology.

Börnigen D, Pers TH, Thorrez L, Huttenhower C, Moreau Y, Brunak S.

Nucleic Acids Res. 2013 Oct;41(18):e171. doi: 10.1093/nar/gkt661. Epub 2013 Aug 5.

16.

Functional profiling of the gut microbiome in disease-associated inflammation.

Börnigen D, Morgan XC, Franzosa EA, Ren B, Xavier RJ, Garrett WS, Huttenhower C.

Genome Med. 2013 Jul 31;5(7):65. doi: 10.1186/gm469. eCollection 2013. Review.

17.

Finding the targets of a drug by integration of gene expression data with a protein interaction network.

Laenen G, Thorrez L, Börnigen D, Moreau Y.

Mol Biosyst. 2013 Jul;9(7):1676-85. doi: 10.1039/c3mb25438k. Epub 2013 Feb 26.

PMID:
23443074
18.

An unbiased evaluation of gene prioritization tools.

Börnigen D, Tranchevent LC, Bonachela-Capdevila F, Devriendt K, De Moor B, De Causmaecker P, Moreau Y.

Bioinformatics. 2012 Dec 1;28(23):3081-8. doi: 10.1093/bioinformatics/bts581. Epub 2012 Oct 9.

PMID:
23047555
19.

Combined mRNA microarray and proteomic analysis of eutopic endometrium of women with and without endometriosis.

Fassbender A, Verbeeck N, Börnigen D, Kyama CM, Bokor A, Vodolazkaia A, Peeraer K, Tomassetti C, Meuleman C, Gevaert O, Van de Plas R, Ojeda F, De Moor B, Moreau Y, Waelkens E, D'Hooghe TM.

Hum Reprod. 2012 Jul;27(7):2020-9. doi: 10.1093/humrep/des127. Epub 2012 May 3.

PMID:
22556377

Supplemental Content

Loading ...
Support Center