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Items: 1 to 50 of 228

1.

Selected Papers from the Workshop on Computational Biology: Joint with the International Joint Conference on Artificial Intelligence and the International Conference on Machine Learning, 2018.

Diallo AB, Nguifo EM, Dhifli W, Azizi E, Prabhakaran S, Tansey W.

J Comput Biol. 2019 Jun;26(6):507-508. doi: 10.1089/cmb.2019.29020.abd. No abstract available.

PMID:
31184954
2.

Compliant substrates disrupt elastic energy storage in jumping tree frogs.

Reynaga CM, Eaton CE, Strong GA, Azizi E.

Integr Comp Biol. 2019 May 29. pii: icz069. doi: 10.1093/icb/icz069. [Epub ahead of print]

PMID:
31141102
3.

Association of serum content of 25-hydroxy vitamin D with semen quality in normozoospermic and oligoasthenoteratozoospermic men.

Azizi E, Naji M, Shabani-Nashtaei M, Aligholi A, Najafi A, Amidi F.

Int J Reprod Biomed (Yazd). 2018 Nov;16(11):689-696.

4.

Detection of CTC Clusters and a Dedifferentiated RNA-Expression Survival Signature in Prostate Cancer.

Kozminsky M, Fouladdel S, Chung JS, Wang Y, Smith DC, Alva A, Azizi E, Morgan T, Nagrath S.

Adv Sci (Weinh). 2018 Nov 15;6(2):1801254. doi: 10.1002/advs.201801254. eCollection 2019 Jan 23.

5.

PD-L1 Expression in Circulating Tumor Cells Increases during Radio(chemo)therapy and Indicates Poor Prognosis in Non-small Cell Lung Cancer.

Wang Y, Kim TH, Fouladdel S, Zhang Z, Soni P, Qin A, Zhao L, Azizi E, Lawrence TS, Ramnath N, Cuneo KC, Nagrath S.

Sci Rep. 2019 Jan 24;9(1):566. doi: 10.1038/s41598-018-36096-7.

6.

Molecular epidemiology of Pseudomonas aeruginosa in University Clinical Center of Kosovo.

Lila G, Mulliqi G, Raka L, Kurti A, Bajrami R, Azizi E.

Infect Drug Resist. 2018 Oct 26;11:2039-2046. doi: 10.2147/IDR.S174940. eCollection 2018.

7.

Klüver-Bucy Syndrome Following Traumatic Brain Injury: A Systematic Synthesis and Review of Pharmacological Treatment From Cases in Adolescents and Adults.

Clay FJ, Kuriakose A, Lesche D, Hicks AJ, Zaman H, Azizi E, Ponsford JL, Jayaram M, Hopwood M.

J Neuropsychiatry Clin Neurosci. 2019 Winter;31(1):6-16. doi: 10.1176/appi.neuropsych.18050112. Epub 2018 Oct 31.

PMID:
30376788
8.
9.

Capacity Building through Water Quality and Safety Analyses in Herat, Afghanistan.

Ebner PD, Deering A, Mojadady M, Rahimi Z, Amini R, Popal M, Eshaqzai N, Barak S, Amini S, Azizi E, Morshid E, Mohammadi N, Rahimi M, McNAMARA K, Oliver HF.

J Food Prot. 2018 Sep;81(9):1467-1471. doi: 10.4315/0362-028X.JFP-18-051.

PMID:
30084655
10.

Is experience in multi-genre video game playing accompanied by impulsivity?

Azizi E, Stainer MJ, Abel LA.

Acta Psychol (Amst). 2018 Oct;190:78-84. doi: 10.1016/j.actpsy.2018.07.006. Epub 2018 Jul 19.

PMID:
30031355
11.

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment.

Azizi E, Carr AJ, Plitas G, Cornish AE, Konopacki C, Prabhakaran S, Nainys J, Wu K, Kiseliovas V, Setty M, Choi K, Fromme RM, Dao P, McKenney PT, Wasti RC, Kadaveru K, Mazutis L, Rudensky AY, Pe'er D.

Cell. 2018 Aug 23;174(5):1293-1308.e36. doi: 10.1016/j.cell.2018.05.060. Epub 2018 Jun 28.

PMID:
29961579
12.

Structural Determinants of Muscle Gearing During Dynamic Contractions.

Eng CM, Azizi E, Roberts TJ.

Integr Comp Biol. 2018 Aug 1;58(2):207-218. doi: 10.1093/icb/icy054.

PMID:
29889236
13.

Morphological and kinematic specializations of walking frogs.

Reynaga CM, Astley HC, Azizi E.

J Exp Zool A Ecol Integr Physiol. 2018 Feb;329(2):87-98. doi: 10.1002/jez.2182. Epub 2018 May 30.

PMID:
29851278
14.

The principles of cascading power limits in small, fast biological and engineered systems.

Ilton M, Bhamla MS, Ma X, Cox SM, Fitchett LL, Kim Y, Koh JS, Krishnamurthy D, Kuo CY, Temel FZ, Crosby AJ, Prakash M, Sutton GP, Wood RJ, Azizi E, Bergbreiter S, Patek SN.

Science. 2018 Apr 27;360(6387). pii: eaao1082. doi: 10.1126/science.aao1082.

PMID:
29700237
15.

Heterogeneity of Human Breast Stem and Progenitor Cells as Revealed by Transcriptional Profiling.

Colacino JA, Azizi E, Brooks MD, Harouaka R, Fouladdel S, McDermott SP, Lee M, Hill D, Madden J, Boerner J, Cote ML, Sartor MA, Rozek LS, Wicha MS.

Stem Cell Reports. 2018 May 8;10(5):1596-1609. doi: 10.1016/j.stemcr.2018.03.001. Epub 2018 Mar 29.

16.

Expression of miR-15a, miR-145, and miR-182 in granulosa-lutein cells, follicular fluid, and serum of women with polycystic ovary syndrome (PCOS).

Naji M, Nekoonam S, Aleyasin A, Arefian E, Mahdian R, Azizi E, Shabani Nashtaei M, Amidi F.

Arch Gynecol Obstet. 2018 Jan;297(1):221-231. doi: 10.1007/s00404-017-4570-y. Epub 2017 Oct 25.

PMID:
29071578
17.

High-Throughput Microfluidic Labyrinth for the Label-free Isolation of Circulating Tumor Cells.

Lin E, Rivera-Báez L, Fouladdel S, Yoon HJ, Guthrie S, Wieger J, Deol Y, Keller E, Sahai V, Simeone DM, Burness ML, Azizi E, Wicha MS, Nagrath S.

Cell Syst. 2017 Sep 27;5(3):295-304.e4. doi: 10.1016/j.cels.2017.08.012. Epub 2017 Sep 20.

18.

Germline Variation at CDKN2A and Associations with Nevus Phenotypes among Members of Melanoma Families.

Taylor NJ, Mitra N, Goldstein AM, Tucker MA, Avril MF, Azizi E, Bergman W, Bishop DT, Bressac-de Paillerets B, Bruno W, Calista D, Cannon-Albright LA, Cuellar F, Cust AE, Demenais F, Elder DE, Gerdes AM, Ghiorzo P, Grazziotin TC, Hansson J, Harland M, Hayward NK, Hocevar M, Höiom V, Ingvar C, Landi MT, Landman G, Larre-Borges A, Leachman SA, Mann GJ, Nagore E, Olsson H, Palmer JM, Perić B, Pjanova D, Pritchard A, Puig S, van der Stoep N, Wadt KAW, Whitaker L, Yang XR, Newton Bishop JA, Gruis NA, Kanetsky PA; GenoMEL Study Group.

J Invest Dermatol. 2017 Dec;137(12):2606-2612. doi: 10.1016/j.jid.2017.07.829. Epub 2017 Aug 19.

19.

Poor Prognosis Indicated by Venous Circulating Tumor Cell Clusters in Early-Stage Lung Cancers.

Murlidhar V, Reddy RM, Fouladdel S, Zhao L, Ishikawa MK, Grabauskiene S, Zhang Z, Lin J, Chang AC, Carrott P, Lynch WR, Orringer MB, Kumar-Sinha C, Palanisamy N, Beer DG, Wicha MS, Ramnath N, Azizi E, Nagrath S.

Cancer Res. 2017 Sep 15;77(18):5194-5206. doi: 10.1158/0008-5472.CAN-16-2072. Epub 2017 Jul 17.

20.

Lowering metabolic rate mitigates muscle atrophy in western fence lizards.

Balaban J, Azizi E.

J Exp Biol. 2017 Aug 1;220(Pt 15):2748-2756. doi: 10.1242/jeb.154294. Epub 2017 May 15.

21.

Selective Photomechanical Detachment and Retrieval of Divided Sister Cells from Enclosed Microfluidics for Downstream Analyses.

Chen YC, Baac HW, Lee KT, Fouladdel S, Teichert K, Ok JG, Cheng YH, Ingram PN, Hart AJ, Azizi E, Guo LJ, Wicha MS, Yoon E.

ACS Nano. 2017 May 23;11(5):4660-4668. doi: 10.1021/acsnano.7b00413. Epub 2017 May 8.

PMID:
28480715
22.

Photocatalytic degradation of Aniline from aqueous solutions under sunlight illumination using immobilized Cr:ZnO nanoparticles.

Pirsaheb M, Shahmoradi B, Beikmohammadi M, Azizi E, Hossini H, Md Ashraf G.

Sci Rep. 2017 May 3;7(1):1473. doi: 10.1038/s41598-017-01461-5.

23.

Resistance to radial expansion limits muscle strain and work.

Azizi E, Deslauriers AR, Holt NC, Eaton CE.

Biomech Model Mechanobiol. 2017 Oct;16(5):1633-1643. doi: 10.1007/s10237-017-0909-3. Epub 2017 Apr 21.

24.

The prevalence and resistance patterns of Pseudomonas aeruginosa in a tertiary care hospital in Kosovo.

Lila G, Mulliqi-Osmani G, Bajrami R, Kurti A, Azizi E, Raka L.

Infez Med. 2017 Mar 1;25(1):21-26.

25.

Cutaneous squamous cell carcinoma and the PARK2 gene.

Inzelberg R, Friedman E, Azizi E.

Br J Dermatol. 2017 Jul;177(1):323-324. doi: 10.1111/bjd.15465. Epub 2017 May 8. No abstract available.

PMID:
28301044
26.

Microfluidic continuum sorting of sub-populations of tumor cells via surface antibody expression levels.

Jack R, Hussain K, Rodrigues D, Zeinali M, Azizi E, Wicha M, Simeone DM, Nagrath S.

Lab Chip. 2017 Mar 29;17(7):1349-1358. doi: 10.1039/c6lc01496h.

PMID:
28294230
27.

The influence of action video game playing on eye movement behaviour during visual search in abstract, in-game and natural scenes.

Azizi E, Abel LA, Stainer MJ.

Atten Percept Psychophys. 2017 Feb;79(2):484-497. doi: 10.3758/s13414-016-1256-7.

PMID:
27981521
28.

The Neurospora Transcription Factor ADV-1 Transduces Light Signals and Temporal Information to Control Rhythmic Expression of Genes Involved in Cell Fusion.

Dekhang R, Wu C, Smith KM, Lamb TM, Peterson M, Bredeweg EL, Ibarra O, Emerson JM, Karunarathna N, Lyubetskaya A, Azizi E, Hurley JM, Dunlap JC, Galagan JE, Freitag M, Sachs MS, Bell-Pedersen D.

G3 (Bethesda). 2017 Jan 5;7(1):129-142. doi: 10.1534/g3.116.034298.

29.

Modeling age-related changes in muscle-tendon dynamics during cyclical contractions in the rat gastrocnemius.

Danos N, Holt NC, Sawicki GS, Azizi E.

J Appl Physiol (1985). 2016 Oct 1;121(4):1004-1012. doi: 10.1152/japplphysiol.00396.2016. Epub 2016 Aug 4.

30.

Cutaneous malignant melanoma and Parkinson disease: Common pathways?

Inzelberg R, Flash S, Friedman E, Azizi E.

Ann Neurol. 2016 Dec;80(6):811-820. doi: 10.1002/ana.24802. Epub 2016 Nov 14. Review.

PMID:
27761938
31.

Ultra-Specific Isolation of Circulating Tumor Cells Enables Rare-Cell RNA Profiling.

Jack RM, Grafton MM, Rodrigues D, Giraldez MD, Griffith C, Cieslak R, Zeinali M, Kumar Sinha C, Azizi E, Wicha M, Tewari M, Simeone DM, Nagrath S.

Adv Sci (Weinh). 2016 Apr 18;3(9):1600063. eCollection 2016 Sep.

32.
34.

Single cell dual adherent-suspension co-culture micro-environment for studying tumor-stromal interactions with functionally selected cancer stem-like cells.

Chen YC, Zhang Z, Fouladdel S, Deol Y, Ingram PN, McDermott SP, Azizi E, Wicha MS, Yoon E.

Lab Chip. 2016 Aug 7;16(15):2935-45. doi: 10.1039/c6lc00062b. Epub 2016 Jul 6.

35.

High-Throughput Single-Cell Derived Sphere Formation for Cancer Stem-Like Cell Identification and Analysis.

Chen YC, Ingram PN, Fouladdel S, McDermott SP, Azizi E, Wicha MS, Yoon E.

Sci Rep. 2016 Jun 13;6:27301. doi: 10.1038/srep27301.

36.

Effects of Er,Cr:YSGG Laser Treatment on Human Gingival Fibroblast Attachment, Viability and Morphology of Root Surface: An In Vitro Study.

Amid R, Azizi E, Torshabi M, Ardakani MR, Ashnagar S, Moiahedi SM.

J Calif Dent Assoc. 2016 May;44(5):291-6.

PMID:
27290823
37.

Determinants of aponeurosis shape change during muscle contraction.

Arellano CJ, Gidmark NJ, Konow N, Azizi E, Roberts TJ.

J Biomech. 2016 Jun 14;49(9):1812-1817. doi: 10.1016/j.jbiomech.2016.04.022. Epub 2016 Apr 26.

38.

Parkinson disease (PARK) genes are somatically mutated in cutaneous melanoma.

Inzelberg R, Samuels Y, Azizi E, Qutob N, Inzelberg L, Domany E, Schechtman E, Friedman E.

Neurol Genet. 2016 Apr 13;2(3):e70. doi: 10.1212/NXG.0000000000000070. eCollection 2016 Jun.

39.

Tunable Thermal-Sensitive Polymer-Graphene Oxide Composite for Efficient Capture and Release of Viable Circulating Tumor Cells.

Yoon HJ, Shanker A, Wang Y, Kozminsky M, Jin Q, Palanisamy N, Burness ML, Azizi E, Simeone DM, Wicha MS, Kim J, Nagrath S.

Adv Mater. 2016 Jun;28(24):4891-7. doi: 10.1002/adma.201600658. Epub 2016 Apr 26.

40.

Stuck in gear: age-related loss of variable gearing in skeletal muscle.

Holt NC, Danos N, Roberts TJ, Azizi E.

J Exp Biol. 2016 Apr;219(Pt 7):998-1003. doi: 10.1242/jeb.133009.

41.

Phenotypic and Histopathological Tumor Characteristics According to CDKN2A Mutation Status among Affected Members of Melanoma Families.

Taylor NJ, Handorf EA, Mitra N, Avril MF, Azizi E, Bergman W, Bianchi-Scarrà G, Bishop DT, Bressac-de Paillerets B, Calista D, Cannon-Albright LA, Cuellar F, Cust AE, Demenais F, Elder DE, Friedman E, Gerdes AM, Ghiorzo P, Goldstein AM, Grazziotin TC, Hansson J, Hayward NK, Hocevar M, Höiom V, Holland EA, Ingvar C, Landi MT, Landman G, Larre-Borges A, Leachman SA, Mann GJ, Nagore E, Olsson H, Palmer J, Perić B, Pjanova D, Puig S, Schmid H, van der Stoep N, Tucker MA, Wadt KAW, Whitaker L, Yang XR, Newton Bishop JA, Gruis NA, Kanetsky PA; GenoMEL Consortium.

J Invest Dermatol. 2016 May;136(5):1066-1069. doi: 10.1016/j.jid.2016.01.009. Epub 2016 Jan 28. No abstract available.

42.

The effect of activation level on muscle function during locomotion: are optimal lengths and velocities always used?

Holt NC, Azizi E.

Proc Biol Sci. 2016 Jan 27;283(1823). pii: 20152832. doi: 10.1098/rspb.2015.2832. Epub 2016 Jan 27.

43.

Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data.

Prabhakaran S, Azizi E, Carr A, Pe'er D.

JMLR Workshop Conf Proc. 2016;48:1070-1079.

44.

Quercetin induces cell cycle arrest and apoptosis in CD133(+) cancer stem cells of human colorectal HT29 cancer cell line and enhances anticancer effects of doxorubicin.

Atashpour S, Fouladdel S, Movahhed TK, Barzegar E, Ghahremani MH, Ostad SN, Azizi E.

Iran J Basic Med Sci. 2015 Jul;18(7):635-43.

45.

Genome-wide meta-analysis identifies five new susceptibility loci for cutaneous malignant melanoma.

Law MH, Bishop DT, Lee JE, Brossard M, Martin NG, Moses EK, Song F, Barrett JH, Kumar R, Easton DF, Pharoah PDP, Swerdlow AJ, Kypreou KP, Taylor JC, Harland M, Randerson-Moor J, Akslen LA, Andresen PA, Avril MF, Azizi E, Scarrà GB, Brown KM, Dębniak T, Duffy DL, Elder DE, Fang S, Friedman E, Galan P, Ghiorzo P, Gillanders EM, Goldstein AM, Gruis NA, Hansson J, Helsing P, Hočevar M, Höiom V, Ingvar C, Kanetsky PA, Chen WV; GenoMEL Consortium; Essen-Heidelberg Investigators; SDH Study Group; Q-MEGA and QTWIN Investigators; AMFS Investigators; ATHENS Melanoma Study Group, Landi MT, Lang J, Lathrop GM, Lubiński J, Mackie RM, Mann GJ, Molven A, Montgomery GW, Novaković S, Olsson H, Puig S, Puig-Butille JA, Qureshi AA, Radford-Smith GL, van der Stoep N, van Doorn R, Whiteman DC, Craig JE, Schadendorf D, Simms LA, Burdon KP, Nyholt DR, Pooley KA, Orr N, Stratigos AJ, Cust AE, Ward SV, Hayward NK, Han J, Schulze HJ, Dunning AM, Bishop JAN, Demenais F, Amos CI, MacGregor S, Iles MM.

Nat Genet. 2015 Sep;47(9):987-995. doi: 10.1038/ng.3373. Epub 2015 Aug 3.

46.

Timing matters: tuning the mechanics of a muscle-tendon unit by adjusting stimulation phase during cyclic contractions.

Sawicki GS, Robertson BD, Azizi E, Roberts TJ.

J Exp Biol. 2015 Oct;218(Pt 19):3150-9. doi: 10.1242/jeb.121673. Epub 2015 Jul 31.

47.

PI3K/Akt inhibition and down-regulation of BCRP re-sensitize MCF7 breast cancer cell line to mitoxantrone chemotherapy.

Komeili-Movahhed T, Fouladdel S, Barzegar E, Atashpour S, Hossein Ghahremani M, Nasser Ostad S, Madjd Z, Azizi E.

Iran J Basic Med Sci. 2015 May;18(5):472-7.

48.

Breast cancer stem cells: current advances and clinical implications.

Luo M, Clouthier SG, Deol Y, Liu S, Nagrath S, Azizi E, Wicha MS.

Methods Mol Biol. 2015;1293:1-49. doi: 10.1007/978-1-4939-2519-3_1. Review.

PMID:
26040679
49.

Effects of berberine on proliferation, cell cycle distribution and apoptosis of human breast cancer T47D and MCF7 cell lines.

Barzegar E, Fouladdel S, Movahhed TK, Atashpour S, Ghahremani MH, Ostad SN, Azizi E.

Iran J Basic Med Sci. 2015 Apr;18(4):334-42.

50.

Passive stiffness of hindlimb muscles in anurans with distinct locomotor specializations.

Danos N, Azizi E.

Zoology (Jena). 2015 Aug;118(4):239-47. doi: 10.1016/j.zool.2015.02.003. Epub 2015 May 9.

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