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Flagellin hypervariable region determines symbiotic properties of commensal Escherichia coli strains.

Steimle A, Menz S, Bender A, Ball B, Weber ANR, Hagemann T, Lange A, Maerz JK, Parusel R, Michaelis L, Schäfer A, Yao H, Löw HC, Beier S, Tesfazgi Mebrhatu M, Gronbach K, Wagner S, Voehringer D, Schaller M, Fehrenbacher B, Autenrieth IB, Oelschlaeger TA, Frick JS.

PLoS Biol. 2019 Jun 17;17(6):e3000334. doi: 10.1371/journal.pbio.3000334. [Epub ahead of print]


Bacterial adhesion and host cell factors leading to effector protein injection by type III secretion system.

Bohn E, Sonnabend M, Klein K, Autenrieth IB.

Int J Med Microbiol. 2019 Jun 4. pii: S1438-4221(19)30013-X. doi: 10.1016/j.ijmm.2019.05.008. [Epub ahead of print] Review.


Author Correction: Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens.

Couto N, Schuele L, Raangs EC, Machado MP, Mendes CI, Jesus TF, Chlebowicz M, Rosema S, Ramirez M, Carriço JA, Autenrieth IB, Friedrich AW, Peter S, Rossen JW.

Sci Rep. 2019 Apr 17;9(1):6406. doi: 10.1038/s41598-019-42134-9.


Deprivation of the Periplasmic Chaperone SurA Reduces Virulence and Restores Antibiotic Susceptibility of Multidrug-Resistant Pseudomonas aeruginosa.

Klein K, Sonnabend MS, Frank L, Leibiger K, Franz-Wachtel M, Macek B, Trunk T, Leo JC, Autenrieth IB, Schütz M, Bohn E.

Front Microbiol. 2019 Feb 21;10:100. doi: 10.3389/fmicb.2019.00100. eCollection 2019.


Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens.

Couto N, Schuele L, Raangs EC, Machado MP, Mendes CI, Jesus TF, Chlebowicz M, Rosema S, Ramirez M, Carriço JA, Autenrieth IB, Friedrich AW, Peter S, Rossen JW.

Sci Rep. 2018 Sep 13;8(1):13767. doi: 10.1038/s41598-018-31873-w. Erratum in: Sci Rep. 2019 Apr 17;9(1):6406.


Typing and Species Identification of Clinical Klebsiella Isolates by Fourier Transform Infrared Spectroscopy and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.

Dinkelacker AG, Vogt S, Oberhettinger P, Mauder N, Rau J, Kostrzewa M, Rossen JWA, Autenrieth IB, Peter S, Liese J.

J Clin Microbiol. 2018 Oct 25;56(11). pii: e00843-18. doi: 10.1128/JCM.00843-18. Print 2018 Nov.


Fighting the enemy within.

Tacconelli E, Autenrieth IB, Peschel A.

Science. 2017 Feb 17;355(6326):689-690. doi: 10.1126/science.aam6372. No abstract available.


The microbiome in health and disease: a new role of microbes in molecular medicine.

Autenrieth IB.

J Mol Med (Berl). 2017 Jan;95(1):1-3. doi: 10.1007/s00109-016-1499-8. No abstract available.


Mitochondrial-bacterial hybrids of BamA/Tob55 suggest variable requirements for the membrane integration of β-barrel proteins.

Pfitzner AK, Steblau N, Ulrich T, Oberhettinger P, Autenrieth IB, Schütz M, Rapaport D.

Sci Rep. 2016 Dec 16;6:39053. doi: 10.1038/srep39053.


Protracted Regional Dissemination of GIM-1-Producing Serratia marcescens in Western Germany.

Wendel AF, Kaase M, Autenrieth IB, Peter S, Oberhettinger P, Rieber H, Pfeffer K, MacKenzie CR, Willmann M.

Antimicrob Agents Chemother. 2017 Feb 23;61(3). pii: e01880-16. doi: 10.1128/AAC.01880-16. Print 2017 Mar.


Vitronectin Binds to a Specific Stretch within the Head Region of Yersinia Adhesin A and Thereby Modulates Yersinia enterocolitica Host Interaction.

Mühlenkamp MC, Hallström T, Autenrieth IB, Bohn E, Linke D, Rinker J, Riesbeck K, Singh B, Leo JC, Hammerschmidt S, Zipfel PF, Schütz MS.

J Innate Immun. 2017;9(1):33-51. doi: 10.1159/000449200. Epub 2016 Nov 1.


The Positron Emission Tomography Tracer 3'-Deoxy-3'-[18F]Fluorothymidine ([18F]FLT) Is Not Suitable to Detect Tissue Proliferation Induced by Systemic Yersinia enterocolitica Infection in Mice.

Wiehr S, Rolle AM, Warnke P, Kohlhofer U, Quintanilla-Martinez L, Reischl G, Autenrieth IB, Pichler BJ, Autenrieth SE.

PLoS One. 2016 Oct 4;11(10):e0164163. doi: 10.1371/journal.pone.0164163. eCollection 2016.


Yersinia enterocolitica YopH-Deficient Strain Activates Neutrophil Recruitment to Peyer's Patches and Promotes Clearance of the Virulent Strain.

Dave MN, Silva JE, Eliçabe RJ, Jeréz MB, Filippa VP, Gorlino CV, Autenrieth S, Autenrieth IB, Di Genaro MS.

Infect Immun. 2016 Oct 17;84(11):3172-3181. doi: 10.1128/IAI.00568-16. Print 2016 Nov.


Symbiotic gut commensal bacteria act as host cathepsin S activity regulators.

Steimle A, Gronbach K, Beifuss B, Schäfer A, Harmening R, Bender A, Maerz JK, Lange A, Michaelis L, Maurer A, Menz S, McCoy K, Autenrieth IB, Kalbacher H, Frick JS.

J Autoimmun. 2016 Dec;75:82-95. doi: 10.1016/j.jaut.2016.07.009. Epub 2016 Jul 30.


Prevotella colorans sp. nov., isolated from a human wound.

Buhl M, Willmann M, Liese J, Autenrieth IB, Marschal M.

Int J Syst Evol Microbiol. 2016 Aug;66(8):3005-9. doi: 10.1099/ijsem.0.001134. Epub 2016 May 4.


Mononuclear phagocytes contribute to intestinal invasion and dissemination of Yersinia enterocolitica.

Drechsler-Hake D, Alamir H, Hahn J, Günter M, Wagner S, Schütz M, Bohn E, Schenke-Layland K, Pisano F, Dersch P, Autenrieth IB, Autenrieth SE.

Int J Med Microbiol. 2016 Sep;306(6):357-66. doi: 10.1016/j.ijmm.2016.04.002. Epub 2016 Apr 19.


Extensive Mobilome-Driven Genome Diversification in Mouse Gut-Associated Bacteroides vulgatus mpk.

Lange A, Beier S, Steimle A, Autenrieth IB, Huson DH, Frick JS.

Genome Biol Evol. 2016 Apr 25;8(4):1197-207. doi: 10.1093/gbe/evw070.


Structure and function: Lipid A modifications in commensals and pathogens.

Steimle A, Autenrieth IB, Frick JS.

Int J Med Microbiol. 2016 Aug;306(5):290-301. doi: 10.1016/j.ijmm.2016.03.001. Epub 2016 Mar 5. Review.


New pathogen-specific immunoPET/MR tracer for molecular imaging of a systemic bacterial infection.

Wiehr S, Warnke P, Rolle AM, Schütz M, Oberhettinger P, Kohlhofer U, Quintanilla-Martinez L, Maurer A, Thornton C, Boschetti F, Reischl G, Autenrieth IB, Pichler BJ, Autenrieth SE.

Oncotarget. 2016 Mar 8;7(10):10990-1001. doi: 10.18632/oncotarget.7770.


A novel approach for reliable detection of cathepsin S activities in mouse antigen presenting cells.

Steimle A, Kalbacher H, Maurer A, Beifuss B, Bender A, Schäfer A, Müller R, Autenrieth IB, Frick JS.

J Immunol Methods. 2016 May;432:87-94. doi: 10.1016/j.jim.2016.02.015. Epub 2016 Feb 18.


Role of β1 integrins and bacterial adhesins for Yop injection into leukocytes in Yersinia enterocolitica systemic mouse infection.

Deuschle E, Keller B, Siegfried A, Manncke B, Spaeth T, Köberle M, Drechsler-Hake D, Reber J, Böttcher RT, Autenrieth SE, Autenrieth IB, Bohn E, Schütz M.

Int J Med Microbiol. 2016 Feb;306(2):77-88. doi: 10.1016/j.ijmm.2015.12.001. Epub 2015 Dec 15.


Yeast Mitochondria as a Model System to Study the Biogenesis of Bacterial β-Barrel Proteins.

Ulrich T, Oberhettinger P, Autenrieth IB, Rapaport D.

Methods Mol Biol. 2015;1329:17-31. doi: 10.1007/978-1-4939-2871-2_2.


Antibiotic Selection Pressure Determination through Sequence-Based Metagenomics.

Willmann M, El-Hadidi M, Huson DH, Schütz M, Weidenmaier C, Autenrieth IB, Peter S.

Antimicrob Agents Chemother. 2015 Dec;59(12):7335-45. doi: 10.1128/AAC.01504-15. Epub 2015 Sep 14.


Innate immune system favors emergency monopoiesis at the expense of DC-differentiation to control systemic bacterial infection in mice.

Pasquevich KA, Bieber K, Günter M, Grauer M, Pötz O, Schleicher U, Biedermann T, Beer-Hammer S, Bühring HJ, Rammensee HG, Zender L, Autenrieth IB, Lengerke C, Autenrieth SE.

Eur J Immunol. 2015 Oct;45(10):2821-33. doi: 10.1002/eji.201545530. Epub 2015 Jul 24.


Yersinia enterocolitica exploits different pathways to accomplish adhesion and toxin injection into host cells.

Keller B, Mühlenkamp M, Deuschle E, Siegfried A, Mössner S, Schade J, Griesinger T, Katava N, Braunsdorf C, Fehrenbacher B, Jiménez-Soto LF, Schaller M, Haas R, Genth H, Retta SF, Meyer H, Böttcher RT, Zent R, Schütz M, Autenrieth IB, Bohn E.

Cell Microbiol. 2015 Aug;17(8):1179-204. doi: 10.1111/cmi.12429. Epub 2015 Mar 20.


TLR signaling-induced CD103-expressing cells protect against intestinal inflammation.

Wittmann A, Bron PA, van Swam II, Kleerebezem M, Adam P, Gronbach K, Menz S, Flade I, Bender A, Schäfer A, Korkmaz AG, Parusel R, Autenrieth IB, Frick JS.

Inflamm Bowel Dis. 2015 Mar;21(3):507-19. doi: 10.1097/MIB.0000000000000292.


Analysis of a long-term outbreak of XDR Pseudomonas aeruginosa: a molecular epidemiological study.

Willmann M, Bezdan D, Zapata L, Susak H, Vogel W, Schröppel K, Liese J, Weidenmaier C, Autenrieth IB, Ossowski S, Peter S.

J Antimicrob Chemother. 2015 May;70(5):1322-30. doi: 10.1093/jac/dku546. Epub 2015 Jan 11.


Clinical and treatment-related risk factors for nosocomial colonisation with extensively drug-resistant Pseudomonas aeruginosa in a haematological patient population: a matched case control study.

Willmann M, Klimek AM, Vogel W, Liese J, Marschal M, Autenrieth IB, Peter S, Buhl M.

BMC Infect Dis. 2014 Dec 10;14:650. doi: 10.1186/s12879-014-0650-9.


The inverse autotransporter intimin exports its passenger domain via a hairpin intermediate.

Oberhettinger P, Leo JC, Linke D, Autenrieth IB, Schütz MS.

J Biol Chem. 2015 Jan 16;290(3):1837-49. doi: 10.1074/jbc.M114.604769. Epub 2014 Dec 8.


Detection of pneumonia associated pathogens using a prototype multiplexed pneumonia test in hospitalized patients with severe pneumonia.

Schulte B, Eickmeyer H, Heininger A, Juretzek S, Karrasch M, Denis O, Roisin S, Pletz MW, Klein M, Barth S, Lüdke GH, Thews A, Torres A, Cillóniz C, Straube E, Autenrieth IB, Keller PM.

PLoS One. 2014 Nov 14;9(11):e110566. doi: 10.1371/journal.pone.0110566. eCollection 2014.


The Intimin periplasmic domain mediates dimerisation and binding to peptidoglycan.

Leo JC, Oberhettinger P, Chaubey M, Schütz M, Kühner D, Bertsche U, Schwarz H, Götz F, Autenrieth IB, Coles M, Linke D.

Mol Microbiol. 2015 Jan;95(1):80-100. doi: 10.1111/mmi.12840. Epub 2014 Nov 24.


Evolutionary conservation in biogenesis of β-barrel proteins allows mitochondria to assemble a functional bacterial trimeric autotransporter protein.

Ulrich T, Oberhettinger P, Schütz M, Holzer K, Ramms AS, Linke D, Autenrieth IB, Rapaport D.

J Biol Chem. 2014 Oct 24;289(43):29457-70. doi: 10.1074/jbc.M114.565655. Epub 2014 Sep 4.


NOD2 stimulation by Staphylococcus aureus-derived peptidoglycan is boosted by Toll-like receptor 2 costimulation with lipoproteins in dendritic cells.

Schäffler H, Demircioglu DD, Kühner D, Menz S, Bender A, Autenrieth IB, Bodammer P, Lamprecht G, Götz F, Frick JS.

Infect Immun. 2014 Nov;82(11):4681-8. doi: 10.1128/IAI.02043-14. Epub 2014 Aug 25.


Translational research strategy: an essential approach to fight the spread of antimicrobial resistance.

Tacconelli E, Peschel A, Autenrieth IB.

J Antimicrob Chemother. 2014 Nov;69(11):2889-91. doi: 10.1093/jac/dku244. Epub 2014 Jul 9. Review.


A nasal epithelial receptor for Staphylococcus aureus WTA governs adhesion to epithelial cells and modulates nasal colonization.

Baur S, Rautenberg M, Faulstich M, Grau T, Severin Y, Unger C, Hoffmann WH, Rudel T, Autenrieth IB, Weidenmaier C.

PLoS Pathog. 2014 May 1;10(5):e1004089. doi: 10.1371/journal.ppat.1004089. eCollection 2014 May. Erratum in: PLoS Pathog. 2014 Jun;10(6):e1004247. Faulstich, Manuela [corrected to Faulstich, Michaela].


Evaluation of Mycobacterium tuberculosis drug susceptibility in clinical specimens from Nigeria using genotype MTBDRplus and MTBDRsl assays.

Felkel M, Exner R, Schleucher R, Lay H, Autenrieth IB, Kempf VA, Frick JS.

Eur J Microbiol Immunol (Bp). 2013 Dec;3(4):252-7. doi: 10.1556/EuJMI.3.2013.4.3. Epub 2013 Nov 21.


Endotoxicity of lipopolysaccharide as a determinant of T-cell-mediated colitis induction in mice.

Gronbach K, Flade I, Holst O, Lindner B, Ruscheweyh HJ, Wittmann A, Menz S, Schwiertz A, Adam P, Stecher B, Josenhans C, Suerbaum S, Gruber AD, Kulik A, Huson D, Autenrieth IB, Frick JS.

Gastroenterology. 2014 Mar;146(3):765-75. doi: 10.1053/j.gastro.2013.11.033. Epub 2013 Nov 21.


Lipopolysaccharide induces cell volume increase and migration of dendritic cells.

Gröbner S, Lukowski R, Autenrieth IB, Ruth P.

Microbiol Immunol. 2014 Jan;58(1):61-7. doi: 10.1111/1348-0421.12116.


Effect of metallo-β-lactamase production and multidrug resistance on clinical outcomes in patients with Pseudomonas aeruginosa bloodstream infection: a retrospective cohort study.

Willmann M, Kuebart I, Marschal M, Schröppel K, Vogel W, Flesch I, Markert U, Autenrieth IB, Hölzl F, Peter S.

BMC Infect Dis. 2013 Nov 1;13:515. doi: 10.1186/1471-2334-13-515.


IFIT2 is an effector protein of type I IFN-mediated amplification of lipopolysaccharide (LPS)-induced TNF-α secretion and LPS-induced endotoxin shock.

Siegfried A, Berchtold S, Manncke B, Deuschle E, Reber J, Ott T, Weber M, Kalinke U, Hofer MJ, Hatesuer B, Schughart K, Gailus-Durner V, Fuchs H, Hrabe de Angelis M, Weber F, Hornef MW, Autenrieth IB, Bohn E.

J Immunol. 2013 Oct 1;191(7):3913-21. doi: 10.4049/jimmunol.1203305. Epub 2013 Sep 6.


Plasmacytoid dendritic cells are crucial in Bifidobacterium adolescentis-mediated inhibition of Yersinia enterocolitica infection.

Wittmann A, Autenrieth IB, Frick JS.

PLoS One. 2013 Aug 20;8(8):e71338. doi: 10.1371/journal.pone.0071338. eCollection 2013.


Time to positivity as prognostic tool in patients with Pseudomonas aeruginosa bloodstream infection.

Willmann M, Kuebart I, Vogel W, Flesch I, Markert U, Marschal M, Schröppel K, Autenrieth IB, Hölzl F, Peter S.

J Infect. 2013 Nov;67(5):416-23. doi: 10.1016/j.jinf.2013.06.012. Epub 2013 Jun 29.


Time series analysis as a tool to predict the impact of antimicrobial restriction in antibiotic stewardship programs using the example of multidrug-resistant Pseudomonas aeruginosa.

Willmann M, Marschal M, Hölzl F, Schröppel K, Autenrieth IB, Peter S.

Antimicrob Agents Chemother. 2013 Apr;57(4):1797-803. doi: 10.1128/AAC.02142-12. Epub 2013 Feb 4.


Yersinia enterocolitica YadA mediates complement evasion by recruitment and inactivation of C3 products.

Schindler MK, Schütz MS, Mühlenkamp MC, Rooijakkers SH, Hallström T, Zipfel PF, Autenrieth IB.

J Immunol. 2012 Nov 15;189(10):4900-8. doi: 10.4049/jimmunol.1201383. Epub 2012 Oct 15.


Intimin and invasin export their C-terminus to the bacterial cell surface using an inverse mechanism compared to classical autotransport.

Oberhettinger P, Schütz M, Leo JC, Heinz N, Berger J, Autenrieth IB, Linke D.

PLoS One. 2012;7(10):e47069. doi: 10.1371/journal.pone.0047069. Epub 2012 Oct 9. Erratum in: PLoS One. 2012;7(11). doi:10.1371/annotation/cb7e47be-dd4b-46cd-b4e5-18b7077f64df.


Quorum sensing in the probiotic bacterium Escherichia coli Nissle 1917 (Mutaflor) - evidence that furanosyl borate diester (AI-2) is influencing the cytokine expression in the DSS colitis mouse model.

Jacobi CA, Grundler S, Hsieh CJ, Frick JS, Adam P, Lamprecht G, Autenrieth IB, Gregor M, Malfertheiner P.

Gut Pathog. 2012 Aug 3;4(1):8. doi: 10.1186/1757-4749-4-8.


In vitro activity of tigecycline and molecular characterization of extended-spectrum beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae isolates from a university hospital in south-western Germany.

Wienke M, Pfeifer Y, Weissgerber P, Marschal M, Autenrieth IB, Gröbner S.

Chemotherapy. 2012;58(3):241-8. doi: 10.1159/000339488. Epub 2012 Jul 25.


Yersinia enterocolitica YopT and Clostridium difficile toxin B induce expression of GILZ in epithelial cells.

Köberle M, Göppel D, Grandl T, Gaentzsch P, Manncke B, Berchtold S, Müller S, Lüscher B, Asselin-Labat ML, Pallardy M, Sorg I, Langer S, Barth H, Zumbihl R, Autenrieth IB, Bohn E.

PLoS One. 2012;7(7):e40730. doi: 10.1371/journal.pone.0040730. Epub 2012 Jul 9.


Role of CD40 ligation in dendritic cell semimaturation.

Gerlach AM, Steimle A, Krampen L, Wittmann A, Gronbach K, Geisel J, Autenrieth IB, Frick JS.

BMC Immunol. 2012 Apr 26;13:22. doi: 10.1186/1471-2172-13-22.


The gut microflora and its variety of roles in health and disease.

Frick JS, Autenrieth IB.

Curr Top Microbiol Immunol. 2013;358:273-89. doi: 10.1007/82_2012_217. Review.


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