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F654A and K558Q Mutations in NMDA Receptor 1 affect ethanol-induced behaviors in Drosophila.

Troutwine B, Park A, Velez-Hernandez ME, Lew L, Mihic SJ, Atkinson NS.

Alcohol Clin Exp Res. 2019 Oct 8. doi: 10.1111/acer.14215. [Epub ahead of print]


Narrow-Band Imaging for Detection of Neoplasia at Colonoscopy: A Meta-analysis of Data From Individual Patients in Randomized Controlled Trials.

Atkinson NSS, Ket S, Bassett P, Aponte D, De Aguiar S, Gupta N, Horimatsu T, Ikematsu H, Inoue T, Kaltenbach T, Leung WK, Matsuda T, Paggi S, Radaelli F, Rastogi A, Rex DK, Sabbagh LC, Saito Y, Sano Y, Saracco GM, Saunders BP, Senore C, Soetikno R, Vemulapalli KC, Jairath V, East JE.

Gastroenterology. 2019 Aug;157(2):462-471. doi: 10.1053/j.gastro.2019.04.014. Epub 2019 Apr 15.


Imaging of toxocariasis.

Dietrich CF, Cretu CM, Atkinson NSS, Lee WJ, Richter J, Cui XW, Sparchez Z, Dong Y.

Z Gastroenterol. 2019 Mar;57(3):327-334. doi: 10.1055/a-0821-7220. Epub 2019 Mar 12.


Never seen before? Opisthorchiasis and Clonorchiasis.

Dietrich CF, Atkinson NSS, Lee WJ, Kling K, Neumayr A, Braden B, Richter J, Akpata R, Southisavath P, Schreiber-Dietrich D, Dong Y.

Z Gastroenterol. 2018 Dec;56(12):1513-1520. doi: 10.1055/a-0751-3078. Epub 2018 Nov 22.


Monitoring food preference in Drosophila by oligonucleotide tagging.

Park A, Tran T, Atkinson NS.

Proc Natl Acad Sci U S A. 2018 Sep 4;115(36):9020-9025. doi: 10.1073/pnas.1716880115. Epub 2018 Aug 20.


Endoscopic ultrasound elastography of small solid pancreatic lesions: a multicenter study.

Ignee A, Jenssen C, Arcidiacono PG, Hocke M, Möller K, Saftoiu A, Will U, Fusaroli P, Iglesias-Garcia J, Ponnudurai R, Petrone MC, Braden B, Burmester E, Dong Y, Atkinson NS, Dietrich CF.

Endoscopy. 2018 Nov;50(11):1071-1079. doi: 10.1055/a-0588-4941. Epub 2018 Apr 24.


Gastrointestinal ultrasound in inflammatory bowel disease: an underused resource with potential paradigm-changing application.

Bryant RV, Friedman AB, Wright EK, Taylor KM, Begun J, Maconi G, Maaser C, Novak KL, Kucharzik T, Atkinson NSS, Asthana A, Gibson PR.

Gut. 2018 May;67(5):973-985. doi: 10.1136/gutjnl-2017-315655. Epub 2018 Feb 3. Review.


How to perform gastrointestinal ultrasound: Anatomy and normal findings.

Atkinson NSS, Bryant RV, Dong Y, Maaser C, Kucharzik T, Maconi G, Asthana AK, Blaivas M, Goudie A, Gilja OH, Nuernberg D, Schreiber-Dietrich D, Dietrich CF.

World J Gastroenterol. 2017 Oct 14;23(38):6931-6941. doi: 10.3748/wjg.v23.i38.6931. Review.


Placebo response and remission rates in randomised trials of induction and maintenance therapy for ulcerative colitis.

Jairath V, Zou GY, Parker CE, MacDonald JK, AlAmeel T, Al Beshir M, Almadi MA, Al-Taweel T, Atkinson NS, Biswas S, Chapman T, Dulai PS, Glaire MA, Hoekman DR, Koutsoumpas A, Minas E, Mosli MH, Samaan M, Khanna R, Travis S, D'Haens G, Sandborn WJ, Feagan BG.

Cochrane Database Syst Rev. 2017 Sep 8;9:CD011572. doi: 10.1002/14651858.CD011572.pub2. Review.


Serous pancreatic neoplasia, data and review.

Dietrich CF, Dong Y, Jenssen C, Ciaravino V, Hocke M, Wang WP, Burmester E, Moeller K, Atkinson NS, Capelli P, D'Onofrio M.

World J Gastroenterol. 2017 Aug 14;23(30):5567-5578. doi: 10.3748/wjg.v23.i30.5567. Review.


Alcohol-Induced Neuroadaptation Is Orchestrated by the Histone Acetyltransferase CBP.

Ghezzi A, Li X, Lew LK, Wijesekera TP, Atkinson NS.

Front Mol Neurosci. 2017 Apr 11;10:103. doi: 10.3389/fnmol.2017.00103. eCollection 2017.


Systematic review with meta-analysis: placebo rates in induction and maintenance trials of Crohn's disease.

Jairath V, Zou G, Parker CE, MacDonald JK, Mosli MH, AlAmeel T, Al Beshir M, AlMadi M, Al-Taweel T, Atkinson NS, Biswas S, Chapman TP, Dulai PS, Glaire MA, Hoekman D, Kherad O, Koutsoumpas A, Minas E, Restellini S, Samaan MA, Khanna R, Levesque BG, D'Haens G, Sandborn WJ, Feagan BG.

Aliment Pharmacol Ther. 2017 Apr;45(8):1021-1042. doi: 10.1111/apt.13973. Epub 2017 Feb 5. Review.


Genetics and genomics of alcohol responses in Drosophila.

Park A, Ghezzi A, Wijesekera TP, Atkinson NS.

Neuropharmacology. 2017 Aug 1;122:22-35. doi: 10.1016/j.neuropharm.2017.01.032. Epub 2017 Feb 1. Review.


Lung artefacts and their use.

Dietrich CF, Mathis G, Blaivas M, Volpicelli G, Seibel A, Atkinson NS, Cui XW, Mei F, Schreiber-Dietrich D, Yi D.

Med Ultrason. 2016 Dec 5;18(4):488-499. doi: 10.11152/mu-878. Review.


Immediate-early alcohol-responsive miRNA expression in Drosophila.

Ghezzi A, Zomeno M, Pietrzykowski AZ, Atkinson NS.

J Neurogenet. 2016 Sep - Dec;30(3-4):195-204. Epub 2016 Nov 15.


Ultrasound contrast agents.

Ignee A, Atkinson NS, Schuessler G, Dietrich CF.

Endosc Ultrasound. 2016 Nov-Dec;5(6):355-362. doi: 10.4103/2303-9027.193594. Review.


Ultrasound-guided central vascular interventions, comments on the European Federation of Societies for Ultrasound in Medicine and Biology guidelines on interventional ultrasound.

Dietrich CF, Horn R, Morf S, Chiorean L, Dong Y, Cui XW, Atkinson NS, Jenssen C.

J Thorac Dis. 2016 Sep;8(9):E851-E868. Review.


WFUMB Position Paper. Learning Gastrointestinal Ultrasound: Theory and Practice.

Atkinson NS, Bryant RV, Dong Y, Maaser C, Kucharzik T, Maconi G, Asthana AK, Blaivas M, Goudie A, Gilja OH, Nolsøe C, Nürnberg D, Dietrich CF.

Ultrasound Med Biol. 2016 Dec;42(12):2732-2742. doi: 10.1016/j.ultrasmedbio.2016.08.026. Epub 2016 Oct 11. Review.


How the Ganetzky lab drove me to alcohol.

Atkinson NS.

J Neurogenet. 2016 Sep - Dec;30(3-4):155-158. Epub 2016 Sep 1.


Lung B-line artefacts and their use.

Dietrich CF, Mathis G, Blaivas M, Volpicelli G, Seibel A, Wastl D, Atkinson NS, Cui XW, Fan M, Yi D.

J Thorac Dis. 2016 Jun;8(6):1356-65. doi: 10.21037/jtd.2016.04.55. Review.


A DNA element in the slo gene modulates ethanol tolerance.

Krishnan HR, Li X, Ghezzi A, Atkinson NS.

Alcohol. 2016 Mar;51:37-42. doi: 10.1016/j.alcohol.2015.12.003. Epub 2016 Jan 21.


Alcohol resistance in Drosophila is modulated by the Toll innate immune pathway.

Troutwine BR, Ghezzi A, Pietrzykowski AZ, Atkinson NS.

Genes Brain Behav. 2016 Apr;15(4):382-94. doi: 10.1111/gbb.12288.


Systematic Review and Meta-analysis: Placebo Rates in Induction and Maintenance Trials of Ulcerative Colitis.

Jairath V, Zou G, Parker CE, Macdonald JK, Mosli MH, Khanna R, Shackelton LM, Vandervoort MK, AlAmeel T, Al Beshir M, AlMadi M, Al-Taweel T, Atkinson NS, Biswas S, Chapman TP, Dulai PS, Glaire MA, Hoekman D, Koutsoumpas A, Minas E, Samaan MA, Travis S, D'Haens G, Levesque BG, Sandborn WJ, Feagan BG.

J Crohns Colitis. 2016 May;10(5):607-18. doi: 10.1093/ecco-jcc/jjw004. Epub 2016 Jan 7. Review.


Clinical risk factors of colorectal cancer in patients with serrated polyposis syndrome: a multicentre cohort analysis.

IJspeert JE, Rana SA, Atkinson NS, van Herwaarden YJ, Bastiaansen BA, van Leerdam ME, Sanduleanu S, Bisseling TM, Spaander MC, Clark SK, Meijer GA, van Lelyveld N, Koornstra JJ, Nagtegaal ID, East JE, Latchford A, Dekker E; Dutch workgroup serrated polyps & polyposis (WASP).

Gut. 2017 Feb;66(2):278-284. doi: 10.1136/gutjnl-2015-310630. Epub 2015 Nov 24.


Helicobacter Pylori Infection: Diagnostic Strategies in Primary Diagnosis and After Therapy.

Atkinson NS, Braden B.

Dig Dis Sci. 2016 Jan;61(1):19-24. doi: 10.1007/s10620-015-3877-4. Epub 2015 Sep 21. Review.


'Lemonade Legs': Why do Some Patients Get Profound Hypomagnesaemia on Proton-Pump Inhibitors?

Atkinson NS, Reynolds DJ, Travis SP.

Intest Res. 2015 Jul;13(3):227-32. doi: 10.5217/ir.2015.13.3.227. Epub 2015 Jun 9. Review.


Optical biopsy and sessile serrated polyps: Is DISCARD dead? Long live DISCARD-lite!

Atkinson NS, East JE.

Gastrointest Endosc. 2015 Jul;82(1):118-21. doi: 10.1016/j.gie.2015.01.059. No abstract available.


A histone modification identifies a DNA element controlling slo BK channel gene expression in muscle.

Li X, Ghezzi A, Krishnan HR, Pohl JB, Bohm AY, Atkinson NS.

J Neurogenet. 2015;29(2-3):124-34. doi: 10.3109/01677063.2015.1050097. Epub 2015 Jul 13.


Ancient association between cation leak channels and Mid1 proteins is conserved in fungi and animals.

Ghezzi A, Liebeskind BJ, Thompson A, Atkinson NS, Zakon HH.

Front Mol Neurosci. 2014 Mar 7;7:15. doi: 10.3389/fnmol.2014.00015. eCollection 2014.


Alcohol-induced histone acetylation reveals a gene network involved in alcohol tolerance.

Ghezzi A, Krishnan HR, Lew L, Prado FJ 3rd, Ong DS, Atkinson NS.

PLoS Genet. 2013;9(12):e1003986. doi: 10.1371/journal.pgen.1003986. Epub 2013 Dec 12.


A DNA element regulates drug tolerance and withdrawal in Drosophila.

Li X, Ghezzi A, Pohl JB, Bohm AY, Atkinson NS.

PLoS One. 2013 Sep 23;8(9):e75549. doi: 10.1371/journal.pone.0075549. eCollection 2013.


Circadian genes differentially affect tolerance to ethanol in Drosophila.

Pohl JB, Ghezzi A, Lew LK, Robles RB, Cormack L, Atkinson NS.

Alcohol Clin Exp Res. 2013 Nov;37(11):1862-71. doi: 10.1111/acer.12173. Epub 2013 Jun 28.


Drosophila larvae as a model to study physiological alcohol dependence.

Robinson BG, Khurana S, Atkinson NS.

Commun Integr Biol. 2013 Mar 1;6(2):e23501. doi: 10.4161/cib.23501.


Is alcoholism learned? Insights from the fruit fly.

Robinson BG, Atkinson NS.

Curr Opin Neurobiol. 2013 Aug;23(4):529-34. doi: 10.1016/j.conb.2013.01.016. Epub 2013 Feb 22.


Functional mapping of the neuronal substrates for drug tolerance in Drosophila.

Ghezzi A, Al-Hasan YM, Krishnan HR, Wang Y, Atkinson NS.

Behav Genet. 2013 May;43(3):227-40. doi: 10.1007/s10519-013-9583-0. Epub 2013 Feb 1.


Neural adaptation leads to cognitive ethanol dependence.

Robinson BG, Khurana S, Kuperman A, Atkinson NS.

Curr Biol. 2012 Dec 18;22(24):2338-41. doi: 10.1016/j.cub.2012.10.038. Epub 2012 Nov 29.


Susceptibility to ethanol withdrawal seizures is produced by BK channel gene expression.

Ghezzi A, Krishnan HR, Atkinson NS.

Addict Biol. 2014 May;19(3):332-7. doi: 10.1111/j.1369-1600.2012.00465.x. Epub 2012 Jun 27.


A low concentration of ethanol impairs learning but not motor and sensory behavior in Drosophila larvae.

Robinson BG, Khurana S, Pohl JB, Li WK, Ghezzi A, Cady AM, Najjar K, Hatch MM, Shah RR, Bhat A, Hariri O, Haroun KB, Young MC, Fife K, Hooten J, Tran T, Goan D, Desai F, Husain F, Godinez RM, Sun JC, Corpuz J, Moran J, Zhong AC, Chen WY, Atkinson NS.

PLoS One. 2012;7(5):e37394. doi: 10.1371/journal.pone.0037394. Epub 2012 May 18.


Ethanol preference in Drosophila melanogaster is driven by its caloric value.

Pohl JB, Baldwin BA, Dinh BL, Rahman P, Smerek D, Prado FJ 3rd, Sherazee N, Atkinson NS.

Alcohol Clin Exp Res. 2012 Nov;36(11):1903-12. doi: 10.1111/j.1530-0277.2012.01817.x. Epub 2012 May 2.


Homeostatic control of neural activity: a Drosophila model for drug tolerance and dependence.

Ghezzi A, Atkinson NS.

Int Rev Neurobiol. 2011;99:23-50. doi: 10.1016/B978-0-12-387003-2.00002-1. Review.


Olfactory conditioning in the third instar larvae of Drosophila melanogaster using heat shock reinforcement.

Khurana S, Robinson BG, Wang Z, Shropshire WC, Zhong AC, Garcia LE, Corpuz J, Chow J, Hatch MM, Precise EF, Cady A, Godinez RM, Pulpanyawong T, Nguyen AT, Li WK, Seiter M, Jahanian K, Sun JC, Shah R, Rajani S, Chen WY, Ray S, Ryazanova NV, Wakou D, Prabhu RK, Atkinson NS.

Behav Genet. 2012 Jan;42(1):151-61. doi: 10.1007/s10519-011-9487-9. Epub 2011 Aug 11.


A role for dynamin in triggering ethanol tolerance.

Krishnan HR, Al-Hasan YM, Pohl JB, Ghezzi A, Atkinson NS.

Alcohol Clin Exp Res. 2012 Jan;36(1):24-34. doi: 10.1111/j.1530-0277.2011.01587.x. Epub 2011 Jul 28.


Tolerance to anesthesia depends on synaptic proteins.

Al-Hasan YM, Krishnan HR, Ghezzi A, Prado FJ 3rd, Robles RB, Atkinson NS.

Behav Genet. 2011 Sep;41(5):734-45. doi: 10.1007/s10519-011-9451-8. Epub 2011 Feb 12.


Image enhancement for tracking the translucent larvae of Drosophila melanogaster.

Khurana S, Li WK, Atkinson NS.

PLoS One. 2010 Dec 30;5(12):e15259. doi: 10.1371/journal.pone.0015259.


BK channels play a counter-adaptive role in drug tolerance and dependence.

Ghezzi A, Pohl JB, Wang Y, Atkinson NS.

Proc Natl Acad Sci U S A. 2010 Sep 14;107(37):16360-5. doi: 10.1073/pnas.1005439107. Epub 2010 Aug 26.


CREB regulation of BK channel gene expression underlies rapid drug tolerance.

Wang Y, Ghezzi A, Yin JC, Atkinson NS.

Genes Brain Behav. 2009 Jun;8(4):369-76. doi: 10.1111/j.1601-183X.2009.00479.x. Epub 2009 Feb 9.


Tolerance in Drosophila.

Atkinson NS.

J Neurogenet. 2009;23(3):293-302. doi: 10.1080/01677060802572937. Epub 2009 Jan 29. Review.


Drug-induced epigenetic changes produce drug tolerance.

Wang Y, Krishnan HR, Ghezzi A, Yin JC, Atkinson NS.

PLoS Biol. 2007 Oct 16;5(10):e265.


Computer automated movement detection for the analysis of behavior.

Ramazani RB, Krishnan HR, Bergeson SE, Atkinson NS.

J Neurosci Methods. 2007 May 15;162(1-2):171-9. Epub 2007 Jan 16.


Tissue-specific alternative splicing of BK channel transcripts in Drosophila.

Yu JY, Upadhyaya AB, Atkinson NS.

Genes Brain Behav. 2006 Jun;5(4):329-39.

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