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Items: 31

1.

The RNA-Protein Interactome of Differentiated Kidney Tubular Epithelial Cells.

Ignarski M, Rill C, Kaiser RWJ, Kaldirim M, Neuhaus R, Esmaillie R, Li X, Klein C, Bohl K, Petersen M, Frese CK, Höhne M, Atanassov I, Rinschen MM, Höpker K, Schermer B, Benzing T, Dieterich C, Fabretti F, Müller RU.

J Am Soc Nephrol. 2019 Mar 13. pii: ASN.2018090914. doi: 10.1681/ASN.2018090914. [Epub ahead of print]

PMID:
30867249
2.

Deregulated Splicing Is a Major Mechanism of RNA-Induced Toxicity in Huntington's Disease.

Schilling J, Broemer M, Atanassov I, Duernberger Y, Vorberg I, Dieterich C, Dagane A, Dittmar G, Wanker E, van Roon-Mom W, Winter J, Krauß S.

J Mol Biol. 2019 Jan 31. pii: S0022-2836(19)30051-8. doi: 10.1016/j.jmb.2019.01.034. [Epub ahead of print]

3.

Mice lacking the mitochondrial exonuclease MGME1 accumulate mtDNA deletions without developing progeria.

Matic S, Jiang M, Nicholls TJ, Uhler JP, Dirksen-Schwanenland C, Polosa PL, Simard ML, Li X, Atanassov I, Rackham O, Filipovska A, Stewart JB, Falkenberg M, Larsson NG, Milenkovic D.

Nat Commun. 2018 Mar 23;9(1):1202. doi: 10.1038/s41467-018-03552-x.

4.

Transcriptomic and proteomic landscape of mitochondrial dysfunction reveals secondary coenzyme Q deficiency in mammals.

Kühl I, Miranda M, Atanassov I, Kuznetsova I, Hinze Y, Mourier A, Filipovska A, Larsson NG.

Elife. 2017 Nov 14;6. pii: e30952. doi: 10.7554/eLife.30952.

5.

Increased Total mtDNA Copy Number Cures Male Infertility Despite Unaltered mtDNA Mutation Load.

Jiang M, Kauppila TES, Motori E, Li X, Atanassov I, Folz-Donahue K, Bonekamp NA, Albarran-Gutierrez S, Stewart JB, Larsson NG.

Cell Metab. 2017 Aug 1;26(2):429-436.e4. doi: 10.1016/j.cmet.2017.07.003.

6.

Matching Dietary Amino Acid Balance to the In Silico-Translated Exome Optimizes Growth and Reproduction without Cost to Lifespan.

Piper MDW, Soultoukis GA, Blanc E, Mesaros A, Herbert SL, Juricic P, He X, Atanassov I, Salmonowicz H, Yang M, Simpson SJ, Ribeiro C, Partridge L.

Cell Metab. 2017 May 2;25(5):1206. doi: 10.1016/j.cmet.2017.04.020. No abstract available.

7.

Mapping the secretome of human chondrogenic progenitor cells with mass spectrometry.

Batschkus S, Atanassov I, Lenz C, Meyer-Marcotty P, Cingöz G, Kirschneck C, Urlaub H, Miosge N.

Ann Anat. 2017 Jul;212:4-10. doi: 10.1016/j.aanat.2017.03.003. Epub 2017 Mar 30.

PMID:
28365382
8.

Matching Dietary Amino Acid Balance to the In Silico-Translated Exome Optimizes Growth and Reproduction without Cost to Lifespan.

Piper MDW, Soultoukis GA, Blanc E, Mesaros A, Herbert SL, Juricic P, He X, Atanassov I, Salmonowicz H, Yang M, Simpson SJ, Ribeiro C, Partridge L.

Cell Metab. 2017 Mar 7;25(3):610-621. doi: 10.1016/j.cmet.2017.02.005. Erratum in: Cell Metab. 2017 May 2;25(5):1206.

9.

Serine ADP-Ribosylation Depends on HPF1.

Bonfiglio JJ, Fontana P, Zhang Q, Colby T, Gibbs-Seymour I, Atanassov I, Bartlett E, Zaja R, Ahel I, Matic I.

Mol Cell. 2017 Mar 2;65(5):932-940.e6. doi: 10.1016/j.molcel.2017.01.003. Epub 2017 Feb 9.

10.

Bayesian prediction of RNA translation from ribosome profiling.

Malone B, Atanassov I, Aeschimann F, Li X, Großhans H, Dieterich C.

Nucleic Acids Res. 2017 Apr 7;45(6):2960-2972. doi: 10.1093/nar/gkw1350.

11.

Functional Analysis of Cellulose Synthase (CESA) Protein Class Specificity.

Kumar M, Atanassov I, Turner S.

Plant Physiol. 2017 Feb;173(2):970-983. doi: 10.1104/pp.16.01642. Epub 2016 Dec 6.

12.

Serine is a new target residue for endogenous ADP-ribosylation on histones.

Leidecker O, Bonfiglio JJ, Colby T, Zhang Q, Atanassov I, Zaja R, Palazzo L, Stockum A, Ahel I, Matic I.

Nat Chem Biol. 2016 Dec;12(12):998-1000. doi: 10.1038/nchembio.2180. Epub 2016 Oct 10.

13.

Archaeal and bacterial diversity in two hot springs from geothermal regions in Bulgaria as demostrated by 16S rRNA and GH-57 genes.

Stefanova K, Tomova I, Tomova A, Radchenkova N, Atanassov I, Kambourova M.

Int Microbiol. 2015 Dec;18(4):217-23. doi: 10.2436/20.1501.01.253.

14.

Hierarchical RNA Processing Is Required for Mitochondrial Ribosome Assembly.

Rackham O, Busch JD, Matic S, Siira SJ, Kuznetsova I, Atanassov I, Ermer JA, Shearwood AM, Richman TR, Stewart JB, Mourier A, Milenkovic D, Larsson NG, Filipovska A.

Cell Rep. 2016 Aug 16;16(7):1874-90. doi: 10.1016/j.celrep.2016.07.031. Epub 2016 Aug 4.

15.

S-Acylation of the cellulose synthase complex is essential for its plasma membrane localization.

Kumar M, Wightman R, Atanassov I, Gupta A, Hurst CH, Hemsley PA, Turner S.

Science. 2016 Jul 8;353(6295):166-9. doi: 10.1126/science.aaf4009.

16.

SLIRP stabilizes LRPPRC via an RRM-PPR protein interface.

Spåhr H, Rozanska A, Li X, Atanassov I, Lightowlers RN, Chrzanowska-Lightowlers ZM, Rackham O, Larsson NG.

Nucleic Acids Res. 2016 Aug 19;44(14):6868-82. doi: 10.1093/nar/gkw575. Epub 2016 Jun 28.

17.

A Polyphenol-Enriched Fraction of Rose Oil Distillation Wastewater Inhibits Cell Proliferation, Migration and TNF-α-Induced VEGF Secretion in Human Immortalized Keratinocytes.

Wedler J, Rusanov K, Atanassov I, Butterweck V.

Planta Med. 2016 Jul;82(11-12):1000-8. doi: 10.1055/s-0042-105158. Epub 2016 Apr 19.

PMID:
27093251
18.

Tyrosinase inhibitory constituents from a polyphenol enriched fraction of rose oil distillation wastewater.

Solimine J, Garo E, Wedler J, Rusanov K, Fertig O, Hamburger M, Atanassov I, Butterweck V.

Fitoterapia. 2016 Jan;108:13-9. doi: 10.1016/j.fitote.2015.11.012. Epub 2015 Nov 21.

PMID:
26592852
19.

Mitofusin 2 is required to maintain mitochondrial coenzyme Q levels.

Mourier A, Motori E, Brandt T, Lagouge M, Atanassov I, Galinier A, Rappl G, Brodesser S, Hultenby K, Dieterich C, Larsson NG.

J Cell Biol. 2015 Feb 16;208(4):429-42. doi: 10.1083/jcb.201411100.

20.

Recovery of polyphenols from rose oil distillation wastewater using adsorption resins--a pilot study.

Rusanov K, Garo E, Rusanova M, Fertig O, Hamburger M, Atanassov I, Butterweck V.

Planta Med. 2014 Nov;80(17):1657-64. doi: 10.1055/s-0034-1383145. Epub 2014 Oct 8.

PMID:
25295672
21.

Double diffractive cross-section measurement in the forward region at the LHC.

Antchev G, Aspell P, Atanassov I, Avati V, Baechler J, Berardi V, Berretti M, Bossini E, Bottigli U, Bozzo M, Brücken E, Buzzo A, Cafagna FS, Catanesi MG, Covault C, Csanád M, Csörgő T, Deile M, Eggert K, Eremin V, Ferro F, Fiergolski A, Garcia F, Giani S, Greco V, Grzanka L, Heino J, Hilden T, Karev A, Kašpar J, Kopal J, Kundrát V, Kurvinen K, Lami S, Latino G, Lauhakangas R, Leszko T, Lippmaa E, Lippmaa J, Lokajíček M, Losurdo L, Lo Vetere M, Lucas Rodríguez F, Macrí M, Mäki T, Mercadante A, Minafra N, Minutoli S, Nemes F, Niewiadomski H, Oliveri E, Oljemark F, Orava R, Oriunno M, Österberg K, Palazzi P, Procházka J, Quinto M, Radermacher E, Radicioni E, Ravotti F, Robutti E, Ropelewski L, Ruggiero G, Saarikko H, Scribano A, Smajek J, Snoeys W, Sziklai J, Taylor C, Turini N, Vacek V, Vítek M, Welti J, Whitmore J, Wyszkowski P; TOTEM Collaboration.

Phys Rev Lett. 2013 Dec 27;111(26):262001. Epub 2013 Dec 26.

PMID:
24483791
22.
23.

Luminosity-independent measurement of the proton-proton total cross section at √s=8 TeV.

Antchev G, Aspell P, Atanassov I, Avati V, Baechler J, Berardi V, Berretti M, Bossini E, Bottigli U, Bozzo M, Brücken E, Buzzo A, Cafagna FS, Calicchio M, Catanesi MG, Covault C, Csanád M, Csörgő T, Deile M, Doubek M, Eggert K, Eremin V, Ferretti R, Ferro F, Fiergolski A, Garcia F, Giani S, Greco V, Grzanka L, Heino J, Hilden T, Intonti RA, Kašpar J, Kopal J, Kundrát V, Kurvinen K, Lami S, Latino G, Lauhakangas R, Leszko T, Lippmaa E, Lokajíček M, Lo Vetere M, Lucas Rodríguez F, Macrí M, Mäki T, Mercadante A, Minafra N, Minutoli S, Nemes F, Niewiadomski H, Oliveri E, Oljemark F, Orava R, Oriunno M, Österberg K, Palazzi P, Procházka J, Quinto M, Radermacher E, Radicioni E, Ravotti F, Robutti E, Ropelewski L, Ruggiero G, Saarikko H, Santroni A, Scribano A, Smajek J, Snoeys W, Sziklai J, Taylor C, Turini N, Vacek V, Vítek M, Welti J, Whitmore J, Wyszkowski P; TOTEM Collaboration.

Phys Rev Lett. 2013 Jul 5;111(1):012001. Epub 2013 Jul 3.

PMID:
23862993
24.

Arabidopsis genes IRREGULAR XYLEM (IRX15) and IRX15L encode DUF579-containing proteins that are essential for normal xylan deposition in the secondary cell wall.

Brown D, Wightman R, Zhang Z, Gomez LD, Atanassov I, Bukowski JP, Tryfona T, McQueen-Mason SJ, Dupree P, Turner S.

Plant J. 2011 May;66(3):401-13. doi: 10.1111/j.1365-313X.2011.04501.x. Epub 2011 Feb 24.

25.

High Archaea diversity in Varvara hot spring, Bulgaria.

Ivanova I, Atanassov I, Lyutskanova D, Stoilova-Disheva M, Dimitrova D, Tomova I, Derekova A, Radeva G, Buchvarova V, Kambourova M.

J Basic Microbiol. 2011 Apr;51(2):163-72. doi: 10.1002/jobm.201000160. Epub 2010 Nov 12.

PMID:
21077120
26.
27.

Elucidating the mechanisms of assembly and subunit interaction of the cellulose synthase complex of Arabidopsis secondary cell walls.

Atanassov II, Pittman JK, Turner SR.

J Biol Chem. 2009 Feb 6;284(6):3833-41. doi: 10.1074/jbc.M807456200. Epub 2008 Dec 4.

28.

Multiple origins of cultivated grapevine (Vitis vinifera L. ssp. sativa) based on chloroplast DNA polymorphisms.

Arroyo-García R, Ruiz-García L, Bolling L, Ocete R, López MA, Arnold C, Ergul A, Söylemezoğlu G, Uzun HI, Cabello F, Ibáñez J, Aradhya MK, Atanassov A, Atanassov I, Balint S, Cenis JL, Costantini L, Goris-Lavets S, Grando MS, Klein BY, McGovern PE, Merdinoglu D, Pejic I, Pelsy F, Primikirios N, Risovannaya V, Roubelakis-Angelakis KA, Snoussi H, Sotiri P, Tamhankar S, This P, Troshin L, Malpica JM, Lefort F, Martinez-Zapater JM.

Mol Ecol. 2006 Oct;15(12):3707-14.

PMID:
17032268
29.

Microsatellite analysis of Rosa damascena Mill. accessions reveals genetic similarity between genotypes used for rose oil production and old Damask rose varieties.

Rusanov K, Kovacheva N, Vosman B, Zhang L, Rajapakse S, Atanassov A, Atanassov I.

Theor Appl Genet. 2005 Aug;111(4):804-9. Epub 2005 Jun 10.

PMID:
15947904
30.

Analysis and evolution of two functional Y-linked loci in a plant sex chromosome system.

Atanassov I, Delichère C, Filatov DA, Charlesworth D, Negrutiu I, Monéger F.

Mol Biol Evol. 2001 Dec;18(12):2162-8.

PMID:
11719565
31.

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