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Items: 31

1.

Aerosolizable Marine Phycotoxins and Human Health Effects: In Vitro Support for the Biogenics Hypothesis.

Van Acker E, De Rijcke M, Asselman J, Beck IM, Huysman S, Vanhaecke L, De Schamphelaere KAC, Janssen CR.

Mar Drugs. 2020 Jan 10;18(1). pii: E46. doi: 10.3390/md18010046.

2.

Evaluating the potential of direct RNA nanopore sequencing: Metatranscriptomics highlights possible seasonal differences in a marine pelagic crustacean zooplankton community.

Semmouri I, De Schamphelaere KAC, Mees J, Janssen CR, Asselman J.

Mar Environ Res. 2019 Nov 5:104836. doi: 10.1016/j.marenvres.2019.104836. [Epub ahead of print]

PMID:
31727392
3.

Epigenetic, transcriptional and phenotypic responses in two generations of Daphnia magna exposed to the DNA methylation inhibitor 5-azacytidine.

Lindeman LC, Thaulow J, Song Y, Kamstra JH, Xie L, Asselman J, Aleström P, Tollefsen KE.

Environ Epigenet. 2019 Sep 3;5(3):dvz016. doi: 10.1093/eep/dvz016. eCollection 2019 Jul.

4.

Genome-Wide Stress Responses to Copper and Arsenic in a Field Population of Daphnia.

Asselman J, Semmouri I, Jackson CE, Keith N, Van Nieuwerburgh F, Deforce D, Shaw JR, De Schamphelaere KAC.

Environ Sci Technol. 2019 Apr 2;53(7):3850-3859. doi: 10.1021/acs.est.8b06720. Epub 2019 Mar 12.

PMID:
30817885
5.

Marine biogenics in sea spray aerosols interact with the mTOR signaling pathway.

Asselman J, Van Acker E, De Rijcke M, Tilleman L, Van Nieuwerburgh F, Mees J, De Schamphelaere KAC, Janssen CR.

Sci Rep. 2019 Jan 24;9(1):675. doi: 10.1038/s41598-018-36866-3.

6.

The transcriptome of the marine calanoid copepod Temora longicornis under heat stress and recovery.

Semmouri I, Asselman J, Van Nieuwerburgh F, Deforce D, Janssen CR, De Schamphelaere KAC.

Mar Environ Res. 2019 Jan;143:10-23. doi: 10.1016/j.marenvres.2018.10.017. Epub 2018 Nov 1.

PMID:
30415781
7.

Bioinformatic Analysis of Methylation Patterns Using Bisulfite Sequencing Data.

Asselman J.

Methods Mol Biol. 2019;1858:157-175. doi: 10.1007/978-1-4939-8775-7_12.

PMID:
30414117
8.

Transgenerational Inheritance of DNA Hypomethylation in Daphnia magna in Response to Salinity Stress.

Jeremias G, Barbosa J, Marques SM, De Schamphelaere KAC, Van Nieuwerburgh F, Deforce D, Gonçalves FJM, Pereira JL, Asselman J.

Environ Sci Technol. 2018 Sep 4;52(17):10114-10123. doi: 10.1021/acs.est.8b03225. Epub 2018 Aug 24.

PMID:
30113818
9.

Effect of β-adrenergic receptor agents on cardiac structure and function and whole-body gene expression in Daphnia magna.

Jeong TY, Asselman J, De Schamphelaere KAC, Van Nieuwerburgh F, Deforce D, Kim SD.

Environ Pollut. 2018 Oct;241:869-878. doi: 10.1016/j.envpol.2018.06.026. Epub 2018 Jun 12.

PMID:
29913414
10.

Synthesizing the role of epigenetics in the response and adaptation of species to climate change in freshwater ecosystems.

Jeremias G, Barbosa J, Marques SM, Asselman J, Gonçalves FJM, Pereira JL.

Mol Ecol. 2018 Jul;27(13):2790-2806. doi: 10.1111/mec.14727. Epub 2018 Jun 10. Review.

PMID:
29802778
11.

Deciphering the Combined Effects of Environmental Stressors on Gene Transcription: A Conceptual Approach.

Song Y, Asselman J, De Schamphelaere KAC, Salbu B, Tollefsen KE.

Environ Sci Technol. 2018 May 1;52(9):5479-5489. doi: 10.1021/acs.est.8b00749. Epub 2018 Apr 19.

PMID:
29641900
12.

Transgenerational DNA Methylation Changes in Daphnia magna Exposed to Chronic γ Irradiation.

Trijau M, Asselman J, Armant O, Adam-Guillermin C, De Schamphelaere KAC, Alonzo F.

Environ Sci Technol. 2018 Apr 3;52(7):4331-4339. doi: 10.1021/acs.est.7b05695. Epub 2018 Mar 13.

PMID:
29486114
13.

Gene Coexpression Networks Drive and Predict Reproductive Effects in Daphnia in Response to Environmental Disturbances.

Asselman J, Pfrender ME, Lopez JA, Shaw JR, De Schamphelaere KAC.

Environ Sci Technol. 2018 Jan 2;52(1):317-326. doi: 10.1021/acs.est.7b05256. Epub 2017 Dec 15.

PMID:
29211465
14.

Multigenerational Effects of the Antibiotic Tetracycline on Transcriptional Responses of Daphnia magna and Its Relationship to Higher Levels of Biological Organizations.

Kim HY, Asselman J, Jeong TY, Yu S, De Schamphelaere KAC, Kim SD.

Environ Sci Technol. 2017 Nov 7;51(21):12898-12907. doi: 10.1021/acs.est.7b05050. Epub 2017 Oct 27.

PMID:
29023098
15.

A New Reference Genome Assembly for the Microcrustacean Daphnia pulex.

Ye Z, Xu S, Spitze K, Asselman J, Jiang X, Ackerman MS, Lopez J, Harker B, Raborn RT, Thomas WK, Ramsdell J, Pfrender ME, Lynch M.

G3 (Bethesda). 2017 May 5;7(5):1405-1416. doi: 10.1534/g3.116.038638.

16.

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.

Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ.

Sci Data. 2017 Jan 31;4:170006. doi: 10.1038/sdata.2017.6. No abstract available.

17.

Bisulfite Sequencing with Daphnia Highlights a Role for Epigenetics in Regulating Stress Response to Microcystis through Preferential Differential Methylation of Serine and Threonine Amino Acids.

Asselman J, De Coninck DI, Beert E, Janssen CR, Orsini L, Pfrender ME, Decaestecker E, De Schamphelaere KA.

Environ Sci Technol. 2017 Jan 17;51(2):924-931. doi: 10.1021/acs.est.6b03870. Epub 2016 Dec 28.

18.

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.

Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ.

Sci Data. 2016 May 10;3:160030. doi: 10.1038/sdata.2016.30. Erratum in: Sci Data. 2017 Jan 31;4:170006. Rush, Douglas [corrected to Rusch, Douglas B].

19.

Gene Body Methylation Patterns in Daphnia Are Associated with Gene Family Size.

Asselman J, De Coninck DI, Pfrender ME, De Schamphelaere KA.

Genome Biol Evol. 2016 Apr 25;8(4):1185-96. doi: 10.1093/gbe/evw069.

20.

Conserved transcriptional responses to cyanobacterial stressors are mediated by alternate regulation of paralogous genes in Daphnia.

Asselman J, Pfrender ME, Lopez JA, De Coninck DI, Janssen CR, Shaw JR, De Schamphelaere KA.

Mol Ecol. 2015 Apr;24(8):1844-55. doi: 10.1111/mec.13148. Epub 2015 Apr 2.

PMID:
25754071
21.

Global cytosine methylation in Daphnia magna depends on genotype, environment, and their interaction.

Asselman J, De Coninck DI, Vandegehuchte MB, Jansen M, Decaestecker E, De Meester L, Vanden Bussche J, Vanhaecke L, Janssen CR, De Schamphelaere KA.

Environ Toxicol Chem. 2015 May;34(5):1056-61. doi: 10.1002/etc.2887. Epub 2015 Mar 19.

PMID:
25639773
22.

Mixture toxicity of nickel and zinc to Daphnia magna is noninteractive at low effect sizes but becomes synergistic at high effect sizes.

Nys C, Asselman J, Hochmuth JD, Janssen CR, Blust R, Smolders E, De Schamphelaere KA.

Environ Toxicol Chem. 2015 May;34(5):1091-102. doi: 10.1002/etc.2902. Epub 2015 Apr 7.

PMID:
25615641
23.

Are interactive effects of harmful algal blooms and copper pollution a concern for water quality management?

Hochmuth JD, Asselman J, De Schamphelaere KAC.

Water Res. 2014 Sep 1;60:41-53. doi: 10.1016/j.watres.2014.03.041. Epub 2014 Mar 28.

PMID:
24821194
24.

Ecotoxicity of binary mixtures of Microcystis aeruginosa and insecticides to Daphnia pulex.

Asselman J, Janssen CR, Smagghe G, De Schamphelaere KA.

Environ Pollut. 2014 May;188:56-63. doi: 10.1016/j.envpol.2014.01.018. Epub 2014 Feb 16.

PMID:
24553247
25.

Genome-wide transcription profiles reveal genotype-dependent responses of biological pathways and gene-families in Daphnia exposed to single and mixed stressors.

De Coninck DI, Asselman J, Glaholt S, Janssen CR, Colbourne JK, Shaw JR, De Schamphelaere KA.

Environ Sci Technol. 2014 Mar 18;48(6):3513-22. doi: 10.1021/es4053363. Epub 2014 Feb 26.

26.

Transcription patterns of genes encoding four metallothionein homologs in Daphnia pulex exposed to copper and cadmium are time- and homolog-dependent.

Asselman J, Shaw JR, Glaholt SP, Colbourne JK, De Schamphelaere KA.

Aquat Toxicol. 2013 Oct 15;142-143:422-30. doi: 10.1016/j.aquatox.2013.09.010. Epub 2013 Sep 23.

27.

Studying stress response profiles with high throughput microarrays: a case study in Daphnia exposed to different cyanobacterial stressors.

Asselman J, Pfrender M, Lopez J, Shaw J, De Schamphelaere K.

Commun Agric Appl Biol Sci. 2013;78(1):7-8. No abstract available.

PMID:
23875289
28.

Combined exposure to cyanobacteria and carbaryl results in antagonistic effects on the reproduction of Daphnia pulex.

Asselman J, Meys J, Waegeman W, De Baets B, De Schamphelaere KA.

Environ Toxicol Chem. 2013 Sep;32(9):2153-8. doi: 10.1002/etc.2296. Epub 2013 Jul 19.

PMID:
23733205
29.

Identification of pathways, gene networks, and paralogous gene families in Daphnia pulex responding to exposure to the toxic cyanobacterium Microcystis aeruginosa.

Asselman J, De Coninck DI, Glaholt S, Colbourne JK, Janssen CR, Shaw JR, De Schamphelaere KA.

Environ Sci Technol. 2012 Aug 7;46(15):8448-57. doi: 10.1021/es301100j. Epub 2012 Jul 25.

30.

Functional characterization of four metallothionein genes in Daphnia pulex exposed to environmental stressors.

Asselman J, Glaholt SP, Smith Z, Smagghe G, Janssen CR, Colbourne JK, Shaw JR, De Schamphelaere KA.

Aquat Toxicol. 2012 Apr;110-111:54-65. doi: 10.1016/j.aquatox.2011.12.010. Epub 2011 Dec 29.

31.

Will genetic adaptation of natural populations to chemical pollution result in lower or higher tolerance to future climate change?

De Schamphelaere KA, Glaholt S, Asselman J, Messiaen M, De Coninck D, Janssen CR, Colbourne JK, Shaw JR.

Integr Environ Assess Manag. 2011 Jan;7(1):141-3. doi: 10.1002/ieam.149. No abstract available.

PMID:
21184573

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