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The burden of submicroscopic and asymptomatic malaria in India revealed from epidemiology studies at three varied transmission sites in India.

van Eijk AM, Sutton PL, Ramanathapuram L, Sullivan SA, Kanagaraj D, Priya GSL, Ravishankaran S, Asokan A, Sangeetha V, Rao PN, Wassmer SC, Tandel N, Patel A, Desai N, Choubey S, Ali SZ, Barla P, Oraon RR, Mohanty S, Mishra S, Kale S, Bandyopadhyay N, Mallick PK, Huck J, Valecha N, Singh OP, Pradhan K, Singh R, Sharma SK, Srivastava HC, Carlton JM, Eapen A.

Sci Rep. 2019 Nov 19;9(1):17095. doi: 10.1038/s41598-019-53386-w.


Adaptive Cuckoo Search based optimal bilateral filtering for denoising of satellite images.

Asokan A, Anitha J.

ISA Trans. 2019 Nov 7. pii: S0019-0578(19)30488-4. doi: 10.1016/j.isatra.2019.11.008. [Epub ahead of print]


CRISPR genome editing in stem cells turns to gold.

Asokan A.

Nat Mater. 2019 Oct;18(10):1038-1039. doi: 10.1038/s41563-019-0491-4. No abstract available.


A CRISPR Screen Identifies the Cell Polarity Determinant Crumbs 3 as an Adeno-associated Virus Restriction Factor in Hepatocytes.

Madigan VJ, Tyson TO, Yuziuk JA, Pillai M, Moller-Tank S, Asokan A.

J Virol. 2019 Oct 15;93(21). pii: e00943-19. doi: 10.1128/JVI.00943-19. Print 2019 Nov 1.


Ring finger protein 121 is a potent regulator of adeno-associated viral genome transcription.

Madigan VJ, Yuziuk JA, Chiarella AM, Tyson TO, Meganck RM, Elmore ZC, Tse LV, Hathaway NA, Asokan A.

PLoS Pathog. 2019 Aug 6;15(8):e1007988. doi: 10.1371/journal.ppat.1007988. eCollection 2019 Aug.


A novel SRY gene mutation c.266 A>T (p.E89V) in a 46,XY complete gonadal dysgenesis patient.

Raveendran SK, Ramachandran L, Joseph L, Asokan AK, Raj S, George A, James J.

Andrologia. 2019 Oct;51(9):e13377. doi: 10.1111/and.13377. Epub 2019 Jul 30.


Vaccine-Mediated Inhibition of the Transporter Associated with Antigen Processing Is Insufficient To Induce Major Histocompatibility Complex E-Restricted CD8+ T Cells in Nonhuman Primates.

Abdulhaqq SA, Wu H, Schell JB, Hammond KB, Reed JS, Legasse AW, Axthelm MK, Park BS, Asokan A, Früh K, Hansen SG, Picker LJ, Sacha JB.

J Virol. 2019 Sep 12;93(19). pii: e00592-19. doi: 10.1128/JVI.00592-19. Print 2019 Oct 1.


Comparison of knowledge, attitude, and practices regarding needle-stick injury among health care providers.

Madhavan A, Asokan A, Vasudevan A, Maniyappan J, Veena K.

J Family Med Prim Care. 2019 Mar;8(3):840-845. doi: 10.4103/jfmpc.jfmpc_103_19.


Modulation of Sialic Acid Dependence Influences the Central Nervous System Transduction Profile of Adeno-associated Viruses.

Albright BH, Simon KE, Pillai M, Devlin GW, Asokan A.

J Virol. 2019 May 15;93(11). pii: e00332-19. doi: 10.1128/JVI.00332-19. Print 2019 Jun 1.


Long-term evaluation of AAV-CRISPR genome editing for Duchenne muscular dystrophy.

Nelson CE, Wu Y, Gemberling MP, Oliver ML, Waller MA, Bohning JD, Robinson-Hamm JN, Bulaklak K, Castellanos Rivera RM, Collier JH, Asokan A, Gersbach CA.

Nat Med. 2019 Mar;25(3):427-432. doi: 10.1038/s41591-019-0344-3. Epub 2019 Feb 18.


Aquaporin-4-dependent glymphatic solute transport in the rodent brain.

Mestre H, Hablitz LM, Xavier AL, Feng W, Zou W, Pu T, Monai H, Murlidharan G, Castellanos Rivera RM, Simon MJ, Pike MM, Plá V, Du T, Kress BT, Wang X, Plog BA, Thrane AS, Lundgaard I, Abe Y, Yasui M, Thomas JH, Xiao M, Hirase H, Asokan A, Iliff JJ, Nedergaard M.

Elife. 2018 Dec 18;7. pii: e40070. doi: 10.7554/eLife.40070.


Physical positioning markedly enhances brain transduction after intrathecal AAV9 infusion.

Castle MJ, Cheng Y, Asokan A, Tuszynski MH.

Sci Adv. 2018 Nov 14;4(11):eaau9859. doi: 10.1126/sciadv.aau9859. eCollection 2018 Nov.


Tissue-Dependent Expression and Translation of Circular RNAs with Recombinant AAV Vectors In Vivo.

Meganck RM, Borchardt EK, Castellanos Rivera RM, Scalabrino ML, Wilusz JE, Marzluff WF, Asokan A.

Mol Ther Nucleic Acids. 2018 Dec 7;13:89-98. doi: 10.1016/j.omtn.2018.08.008. Epub 2018 Aug 18.


Microclimate variables of the ambient environment deliver the actual estimates of the extrinsic incubation period of Plasmodium vivax and Plasmodium falciparum: a study from a malaria-endemic urban setting, Chennai in India.

Thomas S, Ravishankaran S, Justin NAJA, Asokan A, Kalsingh TMJ, Mathai MT, Valecha N, Montgomery J, Thomas MB, Eapen A.

Malar J. 2018 May 16;17(1):201. doi: 10.1186/s12936-018-2342-1.


Penetrating trauma causing cerebrospinal fluid leak without nerve root damage.

Carpenter H, Hurndall KH, Asokan AK, Fernandes R.

BMJ Case Rep. 2018 May 14;2018. pii: bcr-2017-221461. doi: 10.1136/bcr-2017-221461.


Mapping and Engineering Functional Domains of the Assembly-Activating Protein of Adeno-associated Viruses.

Tse LV, Moller-Tank S, Meganck RM, Asokan A.

J Virol. 2018 Jun 29;92(14). pii: e00393-18. doi: 10.1128/JVI.00393-18. Print 2018 Jul 15.


An Adeno-Associated Virus-Based Toolkit for Preferential Targeting and Manipulating Quiescent Neural Stem Cells in the Adult Hippocampus.

Crowther AJ, Lim SA, Asrican B, Albright BH, Wooten J, Yeh CY, Bao H, Cerri DH, Hu J, Ian Shih YY, Asokan A, Song J.

Stem Cell Reports. 2018 Mar 13;10(3):1146-1159. doi: 10.1016/j.stemcr.2018.01.018. Epub 2018 Mar 1.


Socio-demographic and household attributes may not necessarily influence malaria: evidence from a cross sectional study of households in an urban slum setting of Chennai, India.

Thomas S, Ravishankaran S, Asokan A, Johnson Amala Justin NA, Maria Jusler Kalsingh T, Mathai MT, Valecha N, Eapen A.

Malar J. 2018 Jan 5;17(1):4. doi: 10.1186/s12936-017-2150-z.


Hepatocytic expression of human sodium-taurocholate cotransporting polypeptide enables hepatitis B virus infection of macaques.

Burwitz BJ, Wettengel JM, Mück-Häusl MA, Ringelhan M, Ko C, Festag MM, Hammond KB, Northrup M, Bimber BN, Jacob T, Reed JS, Norris R, Park B, Moller-Tank S, Esser K, Greene JM, Wu HL, Abdulhaqq S, Webb G, Sutton WF, Klug A, Swanson T, Legasse AW, Vu TQ, Asokan A, Haigwood NL, Protzer U, Sacha JB.

Nat Commun. 2017 Dec 15;8(1):2146. doi: 10.1038/s41467-017-01953-y.


Mapping the Structural Determinants Required for AAVrh.10 Transport across the Blood-Brain Barrier.

Albright BH, Storey CM, Murlidharan G, Castellanos Rivera RM, Berry GE, Madigan VJ, Asokan A.

Mol Ther. 2018 Feb 7;26(2):510-523. doi: 10.1016/j.ymthe.2017.10.017. Epub 2017 Oct 26.


Indomethacin Increases Neurogenesis across Age Groups and Improves Delayed Probe Trial Difference Scores in Middle-Aged Rats.

McGuiness JA, Scheinert RB, Asokan A, Stadler VC, Lee CS, Rani A, Kumar A, Foster TC, Ormerod BK.

Front Aging Neurosci. 2017 Sep 5;9:280. doi: 10.3389/fnagi.2017.00280. eCollection 2017.


Primary Cilia Signaling Shapes the Development of Interneuronal Connectivity.

Guo J, Otis JM, Higginbotham H, Monckton C, Cheng J, Asokan A, Mykytyn K, Caspary T, Stuber GD, Anton ES.

Dev Cell. 2017 Aug 7;42(3):286-300.e4. doi: 10.1016/j.devcel.2017.07.010.


Structure-guided evolution of antigenically distinct adeno-associated virus variants for immune evasion.

Tse LV, Klinc KA, Madigan VJ, Castellanos Rivera RM, Wells LF, Havlik LP, Smith JK, Agbandje-McKenna M, Asokan A.

Proc Natl Acad Sci U S A. 2017 Jun 13;114(24):E4812-E4821. doi: 10.1073/pnas.1704766114. Epub 2017 May 30.


Resting and feeding preferences of Anopheles stephensi in an urban setting, perennial for malaria.

Thomas S, Ravishankaran S, Justin NA, Asokan A, Mathai MT, Valecha N, Montgomery J, Thomas MB, Eapen A.

Malar J. 2017 Mar 10;16(1):111. doi: 10.1186/s12936-017-1764-5.


Evaluation of bone mineral density among type 2 diabetes mellitus patients in South Karnataka.

Asokan AG, Jaganathan J, Philip R, Soman RR, Sebastian ST, Pullishery F.

J Nat Sci Biol Med. 2017 Jan-Jun;8(1):94-98. doi: 10.4103/0976-9668.198363.


Inducing circular RNA formation using the CRISPR endoribonuclease Csy4.

Borchardt EK, Meganck RM, Vincent HA, Ball CB, Ramos SBV, Moorman NJ, Marzluff WF, Asokan A.

RNA. 2017 May;23(5):619-627. doi: 10.1261/rna.056838.116. Epub 2017 Feb 21.


Probing the Link among Genomic Cargo, Contact Mechanics, and Nanoindentation in Recombinant Adeno-Associated Virus 2.

Zeng C, Moller-Tank S, Asokan A, Dragnea B.

J Phys Chem B. 2017 Mar 2;121(8):1843-1853. doi: 10.1021/acs.jpcb.6b10131. Epub 2017 Feb 14.


Systemic and Persistent Muscle Gene Expression in Rhesus Monkeys with a Liver De-Targeted Adeno-Associated Virus Vector.

Tarantal AF, Lee CCI, Martinez ML, Asokan A, Samulski RJ.

Hum Gene Ther. 2017 May;28(5):385-391. doi: 10.1089/hum.2016.130. Epub 2017 Jan 25.


Does fluoride influence oviposition of Anopheles stephensi in stored water habitats in an urban setting?

Thomas S, Ravishankaran S, Johnson Amala Justin NA, Asokan A, Maria Jusler Kalsingh T, Mathai MT, Valecha N, Eapen A.

Malar J. 2016 Nov 9;15(1):549.


Crystal-to-Crystal Synthesis of Triazole-Linked Pseudo-proteins via Topochemical Azide-Alkyne Cycloaddition Reaction.

Krishnan BP, Rai R, Asokan A, Sureshan KM.

J Am Chem Soc. 2016 Nov 16;138(45):14824-14827. Epub 2016 Nov 2.


Glymphatic fluid transport controls paravascular clearance of AAV vectors from the brain.

Murlidharan G, Crowther A, Reardon RA, Song J, Asokan A.

JCI Insight. 2016 Sep 8;1(14):e88034. doi: 10.1172/jci.insight.88034.


Cellular transduction mechanisms of adeno-associated viral vectors.

Berry GE, Asokan A.

Curr Opin Virol. 2016 Dec;21:54-60. doi: 10.1016/j.coviro.2016.08.001. Epub 2016 Aug 18. Review.


The use of mosquito repellents at three sites in India with declining malaria transmission: surveys in the community and clinic.

van Eijk AM, Ramanathapuram L, Sutton PL, Peddy N, Choubey S, Mohanty S, Asokan A, Ravishankaran S, Priya GS, Johnson JA, Velayutham S, Kanagaraj D, Patel A, Desai N, Tandel N, Sullivan SA, Wassmer SC, Singh R, Pradhan K, Carlton JM, Srivasatava HC, Eapen A, Sharma SK.

Parasit Vectors. 2016 Jul 27;9(1):418. doi: 10.1186/s13071-016-1709-9.


CNS-restricted Transduction and CRISPR/Cas9-mediated Gene Deletion with an Engineered AAV Vector.

Murlidharan G, Sakamoto K, Rao L, Corriher T, Wang D, Gao G, Sullivan P, Asokan A.

Mol Ther Nucleic Acids. 2016 Jul 19;5(7):e338. doi: 10.1038/mtna.2016.49.


Generation and characterization of anti-Adeno-associated virus serotype 8 (AAV8) and anti-AAV9 monoclonal antibodies.

Tseng YS, Vliet KV, Rao L, McKenna R, Byrne BJ, Asokan A, Agbandje-McKenna M.

J Virol Methods. 2016 Oct;236:105-110. doi: 10.1016/j.jviromet.2016.07.009. Epub 2016 Jul 14.


Resolving Adeno-Associated Viral Particle Diversity With Charge Detection Mass Spectrometry.

Pierson EE, Keifer DZ, Asokan A, Jarrold MF.

Anal Chem. 2016 Jul 5;88(13):6718-25. doi: 10.1021/acs.analchem.6b00883. Epub 2016 Jun 16.


Engineering AAV receptor footprints for gene therapy.

Madigan VJ, Asokan A.

Curr Opin Virol. 2016 Jun;18:89-96. doi: 10.1016/j.coviro.2016.05.001. Epub 2016 Jun 2. Review.


Overhead tank is the potential breeding habitat of Anopheles stephensi in an urban transmission setting of Chennai, India.

Thomas S, Ravishankaran S, Justin JA, Asokan A, Mathai MT, Valecha N, Thomas MB, Eapen A.

Malar J. 2016 May 11;15(1):274. doi: 10.1186/s12936-016-1321-7.


rAAV-compatible MiniPromoters for restricted expression in the brain and eye.

de Leeuw CN, Korecki AJ, Berry GE, Hickmott JW, Lam SL, Lengyell TC, Bonaguro RJ, Borretta LJ, Chopra V, Chou AY, D'Souza CA, Kaspieva O, Laprise S, McInerny SC, Portales-Casamar E, Swanson-Newman MI, Wong K, Yang GS, Zhou M, Jones SJ, Holt RA, Asokan A, Goldowitz D, Wasserman WW, Simpson EM.

Mol Brain. 2016 May 10;9(1):52. doi: 10.1186/s13041-016-0232-4.


Autologous Bone Marrow Aspirate Therapy in Wound Healing.

Chittoria RK, Nandhagopal V, Mohapatra DP, Thiruvoth FM, Sivakumar DK, Asokan A.

Adv Wound Care (New Rochelle). 2016 Mar 1;5(3):102-105.


Characterization of the Adeno-Associated Virus 1 and 6 Sialic Acid Binding Site.

Huang LY, Patel A, Ng R, Miller EB, Halder S, McKenna R, Asokan A, Agbandje-McKenna M.

J Virol. 2016 May 12;90(11):5219-5230. doi: 10.1128/JVI.00161-16. Print 2016 Jun 1.


AAV Gene Therapy for MPS1-associated Corneal Blindness.

Vance M, Llanga T, Bennett W, Woodard K, Murlidharan G, Chungfat N, Asokan A, Gilger B, Kurtzberg J, Samulski RJ, Hirsch ML.

Sci Rep. 2016 Feb 22;6:22131. doi: 10.1038/srep22131.


What is the value of reactive case detection in malaria control? A case-study in India and a systematic review.

van Eijk AM, Ramanathapuram L, Sutton PL, Kanagaraj D, Sri Lakshmi Priya G, Ravishankaran S, Asokan A, Tandel N, Patel A, Desai N, Singh R, Sullivan SA, Carlton JM, Srivastava HC, Eapen A.

Malar J. 2016 Feb 6;15:67. doi: 10.1186/s12936-016-1120-1. Review.


A survey of the dentist attire and gender preferences in dentally anxious children.

Asokan A, Kambalimath HV, Patil RU, Maran S, Bharath KP.

J Indian Soc Pedod Prev Dent. 2016 Jan-Mar;34(1):30-5. doi: 10.4103/0970-4388.175507.


In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy.

Nelson CE, Hakim CH, Ousterout DG, Thakore PI, Moreb EA, Castellanos Rivera RM, Madhavan S, Pan X, Ran FA, Yan WX, Asokan A, Zhang F, Duan D, Gersbach CA.

Science. 2016 Jan 22;351(6271):403-7. doi: 10.1126/science.aad5143. Epub 2015 Dec 31.


Permanent Maxillary Canine Agenesis: A Rare Case Report.

Kambalimath HV, Jain S, Patil RU, Asokan A, Kambalimath D.

Int J Clin Pediatr Dent. 2015 Sep-Dec;8(3):242-6. doi: 10.5005/jp-journals-10005-1322. Epub 2015 Sep 11.


Development of Genetic Dereplication Strains in Aspergillus nidulans Results in the Discovery of Aspercryptin.

Chiang YM, Ahuja M, Oakley CE, Entwistle R, Asokan A, Zutz C, Wang CC, Oakley BR.

Angew Chem Int Ed Engl. 2016 Jan 26;55(5):1662-5. doi: 10.1002/anie.201507097. Epub 2015 Nov 13.


Chemical Modulation of Endocytic Sorting Augments Adeno-associated Viral Transduction.

Berry GE, Asokan A.

J Biol Chem. 2016 Jan 8;291(2):939-47. doi: 10.1074/jbc.M115.687657. Epub 2015 Nov 2.


Controlling mRNA stability and translation with the CRISPR endoribonuclease Csy4.

Borchardt EK, Vandoros LA, Huang M, Lackey PE, Marzluff WF, Asokan A.

RNA. 2015 Nov;21(11):1921-30. doi: 10.1261/rna.051227.115. Epub 2015 Sep 9.


An siRNA Screen Identifies the U2 snRNP Spliceosome as a Host Restriction Factor for Recombinant Adeno-associated Viruses.

Schreiber CA, Sakuma T, Izumiya Y, Holditch SJ, Hickey RD, Bressin RK, Basu U, Koide K, Asokan A, Ikeda Y.

PLoS Pathog. 2015 Aug 5;11(8):e1005082. doi: 10.1371/journal.ppat.1005082. eCollection 2015 Aug.

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