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Items: 1 to 50 of 231

1.

Complete Genome Sequences for Two Talaromyces marneffei Clinical Isolates from Northern and Southern Vietnam.

Cuomo CA, Shea T, Nguyen T, Ashton P, Perfect J, Le T.

Microbiol Resour Announc. 2020 Jan 9;9(2). pii: e01367-19. doi: 10.1128/MRA.01367-19.

2.

Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers.

Ingle DJ, Nair S, Hartman H, Ashton PM, Dyson ZA, Day M, Freedman J, Chattaway MA, Holt KE, Dallman TJ.

PLoS Negl Trop Dis. 2019 Sep 12;13(9):e0007620. doi: 10.1371/journal.pntd.0007620. eCollection 2019 Sep.

3.

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.

Meehan CJ, Goig GA, Kohl TA, Verboven L, Dippenaar A, Ezewudo M, Farhat MR, Guthrie JL, Laukens K, Miotto P, Ofori-Anyinam B, Dreyer V, Supply P, Suresh A, Utpatel C, van Soolingen D, Zhou Y, Ashton PM, Brites D, Cabibbe AM, de Jong BC, de Vos M, Menardo F, Gagneux S, Gao Q, Heupink TH, Liu Q, Loiseau C, Rigouts L, Rodwell TC, Tagliani E, Walker TM, Warren RM, Zhao Y, Zignol M, Schito M, Gardy J, Cirillo DM, Niemann S, Comas I, Van Rie A.

Nat Rev Microbiol. 2019 Sep;17(9):533-545. doi: 10.1038/s41579-019-0214-5. Review.

PMID:
31209399
4.

Photoactivated cell-killing involving a low molecular weight, donor-acceptor diphenylacetylene.

Chisholm DR, Lamb R, Pallett T, Affleck V, Holden C, Marrison J, O'Toole P, Ashton PD, Newling K, Steffen A, Nelson AK, Mahler C, Valentine R, Blacker TS, Bain AJ, Girkin J, Marder TB, Whiting A, Ambler CA.

Chem Sci. 2019 Mar 21;10(17):4673-4683. doi: 10.1039/c9sc00199a. eCollection 2019 May 7.

5.

Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans.

Ashton PM, Thanh LT, Trieu PH, Van Anh D, Trinh NM, Beardsley J, Kibengo F, Chierakul W, Dance DAB, Rattanavong S, Davong V, Hung LQ, Chau NVV, Tung NLN, Chan AK, Thwaites GE, Lalloo DG, Anscombe C, Nhat LTH, Perfect J, Dougan G, Baker S, Harris S, Day JN.

Nat Commun. 2019 May 2;10(1):2035. doi: 10.1038/s41467-019-10092-5.

6.

Nurse-Led Mobility Program: Driving a Culture of Early Mobilization in Medical-Surgical Nursing.

Jones RA, Merkle S, Ruvalcaba L, Ashton P, Bailey C, Lopez M.

J Nurs Care Qual. 2020 Jan/Mar;35(1):20-26. doi: 10.1097/NCQ.0000000000000404.

PMID:
30889084
7.

Fluorescent Retinoic Acid Analogues as Probes for Biochemical and Intracellular Characterization of Retinoid Signaling Pathways.

Chisholm DR, Tomlinson CWE, Zhou GL, Holden C, Affleck V, Lamb R, Newling K, Ashton P, Valentine R, Redfern C, Erostyák J, Makkai G, Ambler CA, Whiting A, Pohl E.

ACS Chem Biol. 2019 Mar 15;14(3):369-377. doi: 10.1021/acschembio.8b00916. Epub 2019 Feb 13.

PMID:
30707838
8.

Maintenance of epigenetic landscape requires CIZ1 and is corrupted in differentiated fibroblasts in long-term culture.

Stewart ER, Turner RML, Newling K, Ridings-Figueroa R, Scott V, Ashton PD, Ainscough JFX, Coverley D.

Nat Commun. 2019 Jan 28;10(1):460. doi: 10.1038/s41467-018-08072-2.

9.

Molecular phylogenomics of the tribe Shoreeae (Dipterocarpaceae) using whole plastid genomes.

Heckenhauer J, Paun O, Chase MW, Ashton PS, Kamariah AS, Samuel R.

Ann Bot. 2019 May 20;123(5):857-865. doi: 10.1093/aob/mcy220.

10.

Virulence of Mycobacterium tuberculosis Clinical Isolates Is Associated With Sputum Pre-treatment Bacterial Load, Lineage, Survival in Macrophages, and Cytokine Response.

Tram TTB, Nhung HN, Vijay S, Hai HT, Thu DDA, Ha VTN, Dinh TD, Ashton PM, Hanh NT, Phu NH, Thwaites GE, Thuong NTT.

Front Cell Infect Microbiol. 2018 Nov 27;8:417. doi: 10.3389/fcimb.2018.00417. eCollection 2018.

11.

A standardized immune phenotyping and automated data analysis platform for multicenter biomarker studies.

Ivison S, Malek M, Garcia RV, Broady R, Halpin A, Richaud M, Brant RF, Wang SI, Goupil M, Guan Q, Ashton P, Warren J, Rajab A, Urschel S, Kumar D, Streitz M, Sawitzki B, Schlickeiser S, Bijl JJ, Wall DA, Delisle JS, West LJ, Brinkman RR, Levings MK.

JCI Insight. 2018 Dec 6;3(23). pii: 121867. doi: 10.1172/jci.insight.121867.

12.

Multilocus sequence typing of Cryptococcus neoformans var. grubii from Laos in a regional and global context.

Thanh LT, Phan TH, Rattanavong S, Nguyen TM, Duong AV, Dacon C, Hoang TN, Nguyen LPH, Tran CTH, Davong V, Nguyen CVV, Thwaites GE, Boni MF, Dance D, Ashton PM, Day JN.

Med Mycol. 2018 Oct 19. doi: 10.1093/mmy/myy105. [Epub ahead of print]

13.

Field methods for sampling tree height for tropical forest biomass estimation.

Sullivan MJP, Lewis SL, Hubau W, Qie L, Baker TR, Banin LF, Chave J, Cuni-Sanchez A, Feldpausch TR, Lopez-Gonzalez G, Arets E, Ashton P, Bastin JF, Berry NJ, Bogaert J, Boot R, Brearley FQ, Brienen R, Burslem DFRP, de Canniere C, Chudomelová M, Dančák M, Ewango C, Hédl R, Lloyd J, Makana JR, Malhi Y, Marimon BS, Junior BHM, Metali F, Moore S, Nagy L, Vargas PN, Pendry CA, Ramírez-Angulo H, Reitsma J, Rutishauser E, Salim KA, Sonké B, Sukri RS, Sunderland T, Svátek M, Umunay PM, Martinez RV, Vernimmen RRE, Torre EV, Vleminckx J, Vos V, Phillips OL.

Methods Ecol Evol. 2018 May;9(5):1179-1189. doi: 10.1111/2041-210X.12962. Epub 2018 Feb 13.

14.

Phylogenomics resolves evolutionary relationships and provides insights into floral evolution in the tribe Shoreeae (Dipterocarpaceae).

Heckenhauer J, Samuel R, Ashton PS, Abu Salim K, Paun O.

Mol Phylogenet Evol. 2018 Oct;127:1-13. doi: 10.1016/j.ympev.2018.05.010. Epub 2018 May 17.

PMID:
29778722
15.

SnapperDB: a database solution for routine sequencing analysis of bacterial isolates.

Dallman T, Ashton P, Schafer U, Jironkin A, Painset A, Shaaban S, Hartman H, Myers R, Underwood A, Jenkins C, Grant K.

Bioinformatics. 2018 Sep 1;34(17):3028-3029. doi: 10.1093/bioinformatics/bty212.

PMID:
29659710
16.

Prediction of Phenotypic Antimicrobial Resistance Profiles From Whole Genome Sequences of Non-typhoidal Salmonella enterica.

Neuert S, Nair S, Day MR, Doumith M, Ashton PM, Mellor KC, Jenkins C, Hopkins KL, Woodford N, de Pinna E, Godbole G, Dallman TJ.

Front Microbiol. 2018 Mar 27;9:592. doi: 10.3389/fmicb.2018.00592. eCollection 2018.

17.

Microexon gene transcriptional profiles and evolution provide insights into blood processing by the Schistosoma japonicum esophagus.

Li XH, DeMarco R, Neves LX, James SR, Newling K, Ashton PD, Cao JP, Wilson RA, Castro-Borges W.

PLoS Negl Trop Dis. 2018 Feb 12;12(2):e0006235. doi: 10.1371/journal.pntd.0006235. eCollection 2018 Feb.

18.

Natural speech algorithm applied to baseline interview data can predict which patients will respond to psilocybin for treatment-resistant depression.

Carrillo F, Sigman M, Fernández Slezak D, Ashton P, Fitzgerald L, Stroud J, Nutt DJ, Carhart-Harris RL.

J Affect Disord. 2018 Apr 1;230:84-86. doi: 10.1016/j.jad.2018.01.006.

PMID:
29407543
19.

Salmonella Enteritidis ST183: emerging and endemic biotypes affecting western European hedgehogs (Erinaceus europaeus) and people in Great Britain.

Lawson B, Franklinos LHV, Rodriguez-Ramos Fernandez J, Wend-Hansen C, Nair S, Macgregor SK, John SK, Pizzi R, Núñez A, Ashton PM, Cunningham AA, M de Pinna E.

Sci Rep. 2018 Feb 5;8(1):2449. doi: 10.1038/s41598-017-18667-2.

20.

Epidemiological analysis of Salmonella clusters identified by whole genome sequencing, England and Wales 2014.

Waldram A, Dolan G, Ashton PM, Jenkins C, Dallman TJ.

Food Microbiol. 2018 May;71:39-45. doi: 10.1016/j.fm.2017.02.012. Epub 2017 Mar 16.

PMID:
29366467
21.

Whole genome sequencing reveals an outbreak of Salmonella Enteritidis associated with reptile feeder mice in the United Kingdom, 2012-2015.

Kanagarajah S, Waldram A, Dolan G, Jenkins C, Ashton PM, Carrion Martin AI, Davies R, Frost A, Dallman TJ, De Pinna EM, Hawker JI, Grant KA, Elson R.

Food Microbiol. 2018 May;71:32-38. doi: 10.1016/j.fm.2017.04.005. Epub 2017 Apr 18.

PMID:
29366466
22.

Author Correction: Long-term carbon sink in Borneo's forests halted by drought and vulnerable to edges.

Qie L, Lewis SL, Sullivan MJP, Lopez-Gonzalez G, Pickavance GC, Sunderland T, Ashton P, Hubau W, Abu Salim K, Aiba SI, Banin LF, Berry N, Brearley FQ, Burslem DFRP, Dančák M, Davies SJ, Fredriksson G, Hamer KC, Hédl R, Kho LK, Kitayama K, Krisnawati H, Lhota S, Malhi Y, Maycock C, Metali F, Mirmanto E, Nagy L, Nilus R, Ong R, Pendry CA, Poulsen AD, Primack RB, Rutishauser E, Samsoedin I, Saragih B, Sist P, Ferry Slik JW, Sukri RS, Svátek M, Tan S, Tjoa A, van Nieuwstadt M, Vernimmen RRE, Yassir I, Kidd PS, Fitriadi M, Ideris NKH, Serudin RM, Abdullah Lim LS, Saparudin MS, Phillips OL.

Nat Commun. 2018 Jan 19;9(1):342. doi: 10.1038/s41467-018-02920-x.

23.

Long-term carbon sink in Borneo's forests halted by drought and vulnerable to edge effects.

Qie L, Lewis SL, Sullivan MJP, Lopez-Gonzalez G, Pickavance GC, Sunderland T, Ashton P, Hubau W, Abu Salim K, Aiba SI, Banin LF, Berry N, Brearley FQ, Burslem DFRP, Dančák M, Davies SJ, Fredriksson G, Hamer KC, Hédl R, Kho LK, Kitayama K, Krisnawati H, Lhota S, Malhi Y, Maycock C, Metali F, Mirmanto E, Nagy L, Nilus R, Ong R, Pendry CA, Poulsen AD, Primack RB, Rutishauser E, Samsoedin I, Saragih B, Sist P, Slik JWF, Sukri RS, Svátek M, Tan S, Tjoa A, van Nieuwstadt M, Vernimmen RRE, Yassir I, Kidd PS, Fitriadi M, Ideris NKH, Serudin RM, Abdullah Lim LS, Saparudin MS, Phillips OL.

Nat Commun. 2017 Dec 19;8(1):1966. doi: 10.1038/s41467-017-01997-0. Erratum in: Nat Commun. 2018 Jan 19;9(1):342.

24.

A Double-Blind, Randomized Trial of High-Dose vs Standard-Dose Influenza Vaccine in Adult Solid-Organ Transplant Recipients.

Natori Y, Shiotsuka M, Slomovic J, Hoschler K, Ferreira V, Ashton P, Rotstein C, Lilly L, Schiff J, Singer L, Humar A, Kumar D.

Clin Infect Dis. 2018 May 17;66(11):1698-1704. doi: 10.1093/cid/cix1082.

PMID:
29253089
25.

Investigation using whole genome sequencing of a prolonged restaurant outbreak of Salmonella Typhimurium linked to the building drainage system, England, February 2015 to March 2016.

Mair-Jenkins J, Borges-Stewart R, Harbour C, Cox-Rogers J, Dallman T, Ashton P, Johnston R, Modha D, Monk P, Puleston R.

Euro Surveill. 2017 Dec;22(49). doi: 10.2807/1560-7917.ES.2017.22.49.17-00037.

26.

Comparison of phenotypic and WGS-derived antimicrobial resistance profiles of Salmonella enterica serovars Typhi and Paratyphi.

Day MR, Doumith M, Do Nascimento V, Nair S, Ashton PM, Jenkins C, Dallman TJ, Stevens FJ, Freedman J, Hopkins KL, Woodford N, De Pinna EM, Godbole G.

J Antimicrob Chemother. 2018 Feb 1;73(2):365-372. doi: 10.1093/jac/dkx379.

PMID:
29216342
27.

Increasing flooding frequency alters soil microbial communities and functions under laboratory conditions.

Randle-Boggis RJ, Ashton PD, Helgason T.

Microbiologyopen. 2018 Feb;7(1). doi: 10.1002/mbo3.548. Epub 2017 Nov 7.

28.

Public health surveillance in the UK revolutionises our understanding of the invasive Salmonella Typhimurium epidemic in Africa.

Ashton PM, Owen SV, Kaindama L, Rowe WPM, Lane CR, Larkin L, Nair S, Jenkins C, de Pinna EM, Feasey NA, Hinton JCD, Dallman TJ.

Genome Med. 2017 Oct 31;9(1):92. doi: 10.1186/s13073-017-0480-7.

29.

Comparative genomics of Cryptococcus neoformans var. grubii associated with meningitis in HIV infected and uninfected patients in Vietnam.

Day JN, Qihui S, Thanh LT, Trieu PH, Van AD, Thu NH, Chau TTH, Lan NPH, Chau NVV, Ashton PM, Thwaites GE, Boni MF, Wolbers M, Nagarajan N, Tan PBO, Baker S.

PLoS Negl Trop Dis. 2017 Jun 14;11(6):e0005628. doi: 10.1371/journal.pntd.0005628. eCollection 2017 Jun.

30.

Phylogenetic structure of European Salmonella Enteritidis outbreak correlates with national and international egg distribution network.

Dallman T, Inns T, Jombart T, Ashton P, Loman N, Chatt C, Messelhaeusser U, Rabsch W, Simon S, Nikisins S, Bernard H, le Hello S, Jourdan da-Silva N, Kornschober C, Mossong J, Hawkey P, de Pinna E, Grant K, Cleary P.

Microb Genom. 2016 Aug 25;2(8):e000070. doi: 10.1099/mgen.0.000070. eCollection 2016 Aug.

31.

A pilot randomized trial of adjuvanted influenza vaccine in adult allogeneic hematopoietic stem cell transplant recipients.

Natori Y, Humar A, Lipton J, Kim DD, Ashton P, Hoschler K, Kumar D.

Bone Marrow Transplant. 2017 Jul;52(7):1016-1021. doi: 10.1038/bmt.2017.24. Epub 2017 Mar 6.

PMID:
28263288
32.

Multinational outbreak of travel-related Salmonella Chester infections in Europe, summers 2014 and 2015.

Fonteneau L, Jourdan Da Silva N, Fabre L, Ashton P, Torpdahl M, Müller L, Bouchrif B, El Boulani A, Valkanou E, Mattheus W, Friesema I, Herrera Leon S, Varela Martínez C, Mossong J, Severi E, Grant K, Weill FX, Gossner CM, Bertrand S, Dallman T, Le Hello S.

Euro Surveill. 2017 Feb 16;22(7). doi: 10.2807/1560-7917.ES.2017.22.7.30463.

33.

Maximising Synergy among Tropical Plant Systematists, Ecologists, and Evolutionary Biologists.

Baker TR, Pennington RT, Dexter KG, Fine PVA, Fortune-Hopkins H, Honorio EN, Huamantupa-Chuquimaco I, Klitgård BB, Lewis GP, de Lima HC, Ashton P, Baraloto C, Davies S, Donoghue MJ, Kaye M, Kress WJ, Lehmann CER, Monteagudo A, Phillips OL, Vasquez R.

Trends Ecol Evol. 2017 Apr;32(4):258-267. doi: 10.1016/j.tree.2017.01.007. Epub 2017 Feb 16. Review.

34.

Diversity and carbon storage across the tropical forest biome.

Sullivan MJ, Talbot J, Lewis SL, Phillips OL, Qie L, Begne SK, Chave J, Cuni-Sanchez A, Hubau W, Lopez-Gonzalez G, Miles L, Monteagudo-Mendoza A, Sonké B, Sunderland T, Ter Steege H, White LJ, Affum-Baffoe K, Aiba SI, de Almeida EC, de Oliveira EA, Alvarez-Loayza P, Dávila EÁ, Andrade A, Aragão LE, Ashton P, Aymard C GA, Baker TR, Balinga M, Banin LF, Baraloto C, Bastin JF, Berry N, Bogaert J, Bonal D, Bongers F, Brienen R, Camargo JL, Cerón C, Moscoso VC, Chezeaux E, Clark CJ, Pacheco ÁC, Comiskey JA, Valverde FC, Coronado EN, Dargie G, Davies SJ, De Canniere C, Djuikouo K MN, Doucet JL, Erwin TL, Espejo JS, Ewango CE, Fauset S, Feldpausch TR, Herrera R, Gilpin M, Gloor E, Hall JS, Harris DJ, Hart TB, Kartawinata K, Kho LK, Kitayama K, Laurance SG, Laurance WF, Leal ME, Lovejoy T, Lovett JC, Lukasu FM, Makana JR, Malhi Y, Maracahipes L, Marimon BS, Junior BH, Marshall AR, Morandi PS, Mukendi JT, Mukinzi J, Nilus R, Vargas PN, Camacho NC, Pardo G, Peña-Claros M, Pétronelli P, Pickavance GC, Poulsen AD, Poulsen JR, Primack RB, Priyadi H, Quesada CA, Reitsma J, Réjou-Méchain M, Restrepo Z, Rutishauser E, Salim KA, Salomão RP, Samsoedin I, Sheil D, Sierra R, Silveira M, Slik JW, Steel L, Taedoumg H, Tan S, Terborgh JW, Thomas SC, Toledo M, Umunay PM, Gamarra LV, Vieira IC, Vos VA, Wang O, Willcock S, Zemagho L.

Sci Rep. 2017 Jan 17;7:39102. doi: 10.1038/srep39102.

35.

Prospective use of whole genome sequencing (WGS) detected a multi-country outbreak of Salmonella Enteritidis.

Inns T, Ashton PM, Herrera-Leon S, Lighthill J, Foulkes S, Jombart T, Rehman Y, Fox A, Dallman T, DE Pinna E, Browning L, Coia JE, Edeghere O, Vivancos R.

Epidemiol Infect. 2017 Jan;145(2):289-298. Epub 2016 Oct 26.

PMID:
27780484
36.

MOST: a modified MLST typing tool based on short read sequencing.

Tewolde R, Dallman T, Schaefer U, Sheppard CL, Ashton P, Pichon B, Ellington M, Swift C, Green J, Underwood A.

PeerJ. 2016 Aug 17;4:e2308. doi: 10.7717/peerj.2308. eCollection 2016.

37.

WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidal Salmonella.

Nair S, Ashton P, Doumith M, Connell S, Painset A, Mwaigwisya S, Langridge G, de Pinna E, Godbole G, Day M.

J Antimicrob Chemother. 2016 Dec;71(12):3400-3408. Epub 2016 Sep 1.

38.

Injectable Fluocinolone Acetonide Long-Acting Implant for Noninfectious Intermediate Uveitis, Posterior Uveitis, and Panuveitis: Two-Year Results.

Jaffe GJ, Lin P, Keenan RT, Ashton P, Skalak C, Stinnett SS.

Ophthalmology. 2016 Sep;123(9):1940-8. doi: 10.1016/j.ophtha.2016.05.025. Epub 2016 Jul 13.

PMID:
27421623
39.

Evaluating techniques for metagenome annotation using simulated sequence data.

Randle-Boggis RJ, Helgason T, Sapp M, Ashton PD.

FEMS Microbiol Ecol. 2016 Jul;92(7). pii: fiw095. doi: 10.1093/femsec/fiw095. Epub 2016 May 8.

40.

Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England and Wales.

Doumith M, Godbole G, Ashton P, Larkin L, Dallman T, Day M, Day M, Muller-Pebody B, Ellington MJ, de Pinna E, Johnson AP, Hopkins KL, Woodford N.

J Antimicrob Chemother. 2016 Aug;71(8):2300-5. doi: 10.1093/jac/dkw093. Epub 2016 Apr 18.

PMID:
27090630
41.

Identification of Salmonella for public health surveillance using whole genome sequencing.

Ashton PM, Nair S, Peters TM, Bale JA, Powell DG, Painset A, Tewolde R, Schaefer U, Jenkins C, Dallman TJ, de Pinna EM, Grant KA; Salmonella Whole Genome Sequencing Implementation Group.

PeerJ. 2016 Apr 5;4:e1752. doi: 10.7717/peerj.1752. eCollection 2016.

42.

Evaluation of Molecular Methods for Serotyping Shigella flexneri.

Gentle A, Ashton PM, Dallman TJ, Jenkins C.

J Clin Microbiol. 2016 Jun;54(6):1456-1461. doi: 10.1128/JCM.03386-15. Epub 2016 Mar 16.

43.

Whole Genome Sequencing for Public Health Surveillance of Shiga Toxin-Producing Escherichia coli Other than Serogroup O157.

Chattaway MA, Dallman TJ, Gentle A, Wright MJ, Long SE, Ashton PM, Perry NT, Jenkins C.

Front Microbiol. 2016 Mar 3;7:258. doi: 10.3389/fmicb.2016.00258. eCollection 2016.

44.

Analysis of work ability and work-related physical activity of employees in a medium-sized business.

Wilke C, Ashton P, Elis T, Biallas B, Froböse I.

BMC Res Notes. 2015 Dec 18;8:803. doi: 10.1186/s13104-015-1781-9.

45.

The Schistosome Esophagus Is a 'Hotspot' for Microexon and Lysosomal Hydrolase Gene Expression: Implications for Blood Processing.

Wilson RA, Li XH, MacDonald S, Neves LX, Vitoriano-Souza J, Leite LC, Farias LP, James S, Ashton PD, DeMarco R, Castro Borges W.

PLoS Negl Trop Dis. 2015 Dec 7;9(12):e0004272. doi: 10.1371/journal.pntd.0004272. eCollection 2015 Dec.

46.

An integrated pan-tropical biomass map using multiple reference datasets.

Avitabile V, Herold M, Heuvelink GB, Lewis SL, Phillips OL, Asner GP, Armston J, Ashton PS, Banin L, Bayol N, Berry NJ, Boeckx P, de Jong BH, DeVries B, Girardin CA, Kearsley E, Lindsell JA, Lopez-Gonzalez G, Lucas R, Malhi Y, Morel A, Mitchard ET, Nagy L, Qie L, Quinones MJ, Ryan CM, Ferry SJ, Sunderland T, Laurin GV, Gatti RC, Valentini R, Verbeeck H, Wijaya A, Willcock S.

Glob Chang Biol. 2016 Apr;22(4):1406-20. doi: 10.1111/gcb.13139. Epub 2016 Jan 10.

47.

Whole Genome Sequencing demonstrates that Geographic Variation of Escherichia coli O157 Genotypes Dominates Host Association.

Strachan NJ, Rotariu O, Lopes B, MacRae M, Fairley S, Laing C, Gannon V, Allison LJ, Hanson MF, Dallman T, Ashton P, Franz E, van Hoek AH, French NP, George T, Biggs PJ, Forbes KJ.

Sci Rep. 2015 Oct 7;5:14145. doi: 10.1038/srep14145.

48.

Association between use of proton pump inhibitors and non-typhoidal salmonellosis identified following investigation into an outbreak of Salmonella Mikawasima in the UK, 2013.

Freeman R, Dabrera G, Lane C, Adams N, Browning L, Fowler T, Gorton R, Peters T, Mather H, Ashton P, Dallman T, Godbole G, Tubin-Delic D, Charlett A, Fisher I, Adak GK.

Epidemiol Infect. 2016 Apr;144(5):968-75. doi: 10.1017/S0950268815002332. Epub 2015 Oct 1.

PMID:
26424497
49.

Biologically-supported structural model for a viral satellite RNA.

Ashton P, Wu B, D'Angelo J, Grigull J, White KA.

Nucleic Acids Res. 2015 Nov 16;43(20):9965-77. doi: 10.1093/nar/gkv917. Epub 2015 Sep 17.

50.

Applying phylogenomics to understand the emergence of Shiga-toxin-producing Escherichia coli O157:H7 strains causing severe human disease in the UK.

Dallman TJ, Ashton PM, Byrne L, Perry NT, Petrovska L, Ellis R, Allison L, Hanson M, Holmes A, Gunn GJ, Chase-Topping ME, Woolhouse MEJ, Grant KA, Gally DL, Wain J, Jenkins C.

Microb Genom. 2015 Sep 14;1(3):e000029. doi: 10.1099/mgen.0.000029. eCollection 2015 Sep.

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