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Items: 1 to 50 of 61

1.

The use of SWATH to analyse the dynamic changes of bacterial proteome of carbapanemase-producing Escherichia coli under antibiotic pressure.

Sidjabat HE, Gien J, Kvaskoff D, Ashman K, Vaswani K, Reed S, McGeary RP, Paterson DL, Bordin A, Schenk G.

Sci Rep. 2018 Mar 1;8(1):3871. doi: 10.1038/s41598-018-21984-9.

2.

Applying SWATH Mass Spectrometry to Investigate Human Cervicovaginal Fluid During the Menstrual Cycle.

Vaswani K, Ashman K, Reed S, Salomon C, Sarker S, Arraztoa JA, Pérez-Sepúlveda A, Illanes SE, Kvaskoff D, Mitchell MD, Rice GE.

Biol Reprod. 2015 Aug;93(2):39. doi: 10.1095/biolreprod.115.128231. Epub 2015 Jun 24.

PMID:
26108790
3.

Myostatin is localized in extravillous trophoblast and up-regulates migration.

Peiris HN, Salomon C, Payton D, Ashman K, Vaswani K, Chan A, Rice GE, Mitchell MD.

J Clin Endocrinol Metab. 2014 Nov;99(11):E2288-97. doi: 10.1210/jc.2014-2615. Epub 2014 Aug 5.

PMID:
25093622
4.

Method Development for the Detection of Human Myostatin by High-Resolution and Targeted Mass Spectrometry.

Peiris HN, Ashman K, Vaswani K, Kvaskoff D, Rice GE, Mitchell MD.

J Proteome Res. 2014 Aug 1;13(8):3802-3809. doi: 10.1021/pr5004642. Epub 2014 Jun 30.

PMID:
24949862
5.

General statistical framework for quantitative proteomics by stable isotope labeling.

Navarro P, Trevisan-Herraz M, Bonzon-Kulichenko E, Núñez E, Martínez-Acedo P, Pérez-Hernández D, Jorge I, Mesa R, Calvo E, Carrascal M, Hernáez ML, García F, Bárcena JA, Ashman K, Abian J, Gil C, Redondo JM, Vázquez J.

J Proteome Res. 2014 Mar 7;13(3):1234-47. doi: 10.1021/pr4006958. Epub 2014 Feb 10.

PMID:
24512137
6.

S100A8-S100A9 protein complex mediates psoriasis by regulating the expression of complement factor C3.

Schonthaler HB, Guinea-Viniegra J, Wculek SK, Ruppen I, Ximénez-Embún P, Guío-Carrión A, Navarro R, Hogg N, Ashman K, Wagner EF.

Immunity. 2013 Dec 12;39(6):1171-81. doi: 10.1016/j.immuni.2013.11.011.

7.

Hypoxia-induced changes in the bioactivity of cytotrophoblast-derived exosomes.

Salomon C, Kobayashi M, Ashman K, Sobrevia L, Mitchell MD, Rice GE.

PLoS One. 2013 Nov 11;8(11):e79636. doi: 10.1371/journal.pone.0079636. eCollection 2013.

8.

Exosomal signaling during hypoxia mediates microvascular endothelial cell migration and vasculogenesis.

Salomon C, Ryan J, Sobrevia L, Kobayashi M, Ashman K, Mitchell M, Rice GE.

PLoS One. 2013 Jul 8;8(7):e68451. doi: 10.1371/journal.pone.0068451. Print 2013.

9.

Analysis of protein expression in developmental toxicity induced by MeHg in zebrafish.

Cuello S, Ximénez-Embún P, Ruppen I, Schonthaler HB, Ashman K, Madrid Y, Luque-Garcia JL, Cámara C.

Analyst. 2012 Nov 21;137(22):5302-11. doi: 10.1039/c2an35913h. Epub 2012 Sep 26.

PMID:
23014190
10.

An improved quantitative mass spectrometry analysis of tumor specific mutant proteins at high sensitivity.

Ruppen-Cañás I, López-Casas PP, García F, Ximénez-Embún P, Muñoz M, Morelli MP, Real FX, Serna A, Hidalgo M, Ashman K.

Proteomics. 2012 May;12(9):1319-27. doi: 10.1002/pmic.201100611.

PMID:
22589181
11.

Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function.

Ezkurdia I, del Pozo A, Frankish A, Rodriguez JM, Harrow J, Ashman K, Valencia A, Tress ML.

Mol Biol Evol. 2012 Sep;29(9):2265-83. doi: 10.1093/molbev/mss100. Epub 2012 Mar 22.

12.

Differential protein expression profiling by iTRAQ-two-dimensional LC-MS/MS of human bladder cancer EJ138 cells transfected with the metastasis suppressor KiSS-1 gene.

Ruppen I, Grau L, Orenes-Piñero E, Ashman K, Gil M, Algaba F, Bellmunt J, Sánchez-Carbayo M.

Mol Cell Proteomics. 2010 Oct;9(10):2276-91. doi: 10.1074/mcp.M900255-MCP200. Epub 2010 Feb 5.

13.

Unique ion signature mass spectrometry, a deterministic method to assign peptide identity.

Sherman J, McKay MJ, Ashman K, Molloy MP.

Mol Cell Proteomics. 2009 Sep;8(9):2051-62. doi: 10.1074/mcp.M800512-MCP200. Epub 2009 Jun 25.

14.

Phosphoproteomics and cancer research.

Ashman K, Villar EL.

Clin Transl Oncol. 2009 Jun;11(6):356-62. Review.

PMID:
19531450
15.

How specific is my SRM?: The issue of precursor and product ion redundancy.

Sherman J, McKay MJ, Ashman K, Molloy MP.

Proteomics. 2009 Mar;9(5):1120-3. doi: 10.1002/pmic.200800577.

PMID:
19253278
16.
17.

Carboxylesterase 3 (EC 3.1.1.1) is a major adipocyte lipase.

Soni KG, Lehner R, Metalnikov P, O'Donnell P, Semache M, Gao W, Ashman K, Pshezhetsky AV, Mitchell GA.

J Biol Chem. 2004 Sep 24;279(39):40683-9. Epub 2004 Jun 25.

18.

Dissecting virulence: systematic and functional analyses of a pathogenicity island.

Deng W, Puente JL, Gruenheid S, Li Y, Vallance BA, Vázquez A, Barba J, Ibarra JA, O'Donnell P, Metalnikov P, Ashman K, Lee S, Goode D, Pawson T, Finlay BB.

Proc Natl Acad Sci U S A. 2004 Mar 9;101(10):3597-602. Epub 2004 Feb 26.

19.

Identification and characterization of NleA, a non-LEE-encoded type III translocated virulence factor of enterohaemorrhagic Escherichia coli O157:H7.

Gruenheid S, Sekirov I, Thomas NA, Deng W, O'Donnell P, Goode D, Li Y, Frey EA, Brown NF, Metalnikov P, Pawson T, Ashman K, Finlay BB.

Mol Microbiol. 2004 Mar;51(5):1233-49.

20.

A novel 110 kDa form of myosin XVIIIA (MysPDZ) is tyrosine-phosphorylated after colony-stimulating factor-1 receptor signalling.

Cross M, Csar XF, Wilson NJ, Manes G, Addona TA, Marks DC, Whitty GA, Ashman K, Hamilton JA.

Biochem J. 2004 May 15;380(Pt 1):243-53.

21.

The unexpected youth of globular clusters.

Zepf SE, Ashman KM.

Sci Am. 2003 Oct;289(4):46-51. No abstract available.

PMID:
14513517
22.

Association of phospholamban with a cGMP kinase signaling complex.

Koller A, Schlossmann J, Ashman K, Uttenweiler-Joseph S, Ruth P, Hofmann F.

Biochem Biophys Res Commun. 2003 Jan 3;300(1):155-60.

PMID:
12480535
23.

Tagging life's ups and downs.

Ashman K.

Trends Biotechnol. 2002 Nov;20(11):449. No abstract available.

PMID:
12413815
24.

Identification of signal peptide peptidase, a presenilin-type aspartic protease.

Weihofen A, Binns K, Lemberg MK, Ashman K, Martoglio B.

Science. 2002 Jun 21;296(5576):2215-8.

25.

Automated, rapid solid-phase proteolytic cleavage and sample preparation for proteomics.

Metalnikov P, O'Donnel P, Vassilovski G, Ashman K.

J Biomol Tech. 2002 Jun;13(2):49-55.

26.
27.
28.

Cell signalling - the proteomics of it all.

Ashman K, Moran MF, Sicheri F, Pawson T, Tyers M.

Sci STKE. 2001 Oct 9;2001(103):pe33.

PMID:
11593049
29.

Identification and crystallisation of a heat- and protease-stable fragment of the bacteriophage T4 short tail fibre.

van Raaij MJ, Schoehn G, Jaquinod M, Ashman K, Burda MR, Miller S.

Biol Chem. 2001 Jul;382(7):1049-55.

PMID:
11530935
30.

A Babelfish for biology.

Ashman K.

Trends Biotechnol. 2001 Mar;19(3):86. No abstract available.

PMID:
11179785
31.

Cataloguing life.

Ashman K.

Trends Biotechnol. 2001 Jan;19(1):6. No abstract available.

PMID:
11146095
32.

The N-myc oncogene in human neuroblastoma cells: down-regulation of an angiogenesis inhibitor identified as activin A.

Breit S, Ashman K, Wilting J, Rössler J, Hatzi E, Fotsis T, Schweigerer L.

Cancer Res. 2000 Aug 15;60(16):4596-601.

33.

MYCN oncogene and angiogenesis: down-regulation of endothelial growth inhibitors in human neuroblastoma cells. Purification, structural, and functional characterization.

Hatzi E, Breit S, Zoephel A, Ashman K, Tontsch U, Ahorn H, Murphy C, Schweigerer L, Fotsis T.

Adv Exp Med Biol. 2000;476:239-48.

PMID:
10949669
34.

Vaccinia virus infection disrupts microtubule organization and centrosome function.

Ploubidou A, Moreau V, Ashman K, Reckmann I, González C, Way M.

EMBO J. 2000 Aug 1;19(15):3932-44.

35.

Regulation of intracellular calcium by a signalling complex of IRAG, IP3 receptor and cGMP kinase Ibeta.

Schlossmann J, Ammendola A, Ashman K, Zong X, Huber A, Neubauer G, Wang GX, Allescher HD, Korth M, Wilm M, Hofmann F, Ruth P.

Nature. 2000 Mar 9;404(6774):197-201.

PMID:
10724174
36.

Phosphatidylinositol-3-OH kinases are Rab5 effectors.

Christoforidis S, Miaczynska M, Ashman K, Wilm M, Zhao L, Yip SC, Waterfield MD, Backer JM, Zerial M.

Nat Cell Biol. 1999 Aug;1(4):249-52. No abstract available.

PMID:
10559924
37.

Use of mass spectrometric methods for protein identification in receptor research.

Schrotz-King P, Wilm M, Andersen JS, Ashman K, Podtelejnikov AV, Bachi A, King A, Mann M.

J Recept Signal Transduct Res. 1999 Jan-Jul;19(1-4):659-72.

PMID:
10071791
38.

Vaccination against the gastrointestinal nematode, Haemonchus contortus, using a purified larval surface antigen.

Jacobs HJ, Wiltshire C, Ashman K, Meeusen EN.

Vaccine. 1999 Jan 28;17(4):362-8.

PMID:
9987175
39.

Identification of MINUS, a small polypeptide that functions as a microtubule nucleation suppressor.

Fanara P, Oback B, Ashman K, Podtelejnikov A, Brandt R.

EMBO J. 1999 Feb 1;18(3):565-77.

40.

Existence of distinct tyrosylprotein sulfotransferase genes: molecular characterization of tyrosylprotein sulfotransferase-2.

Beisswanger R, Corbeil D, Vannier C, Thiele C, Dohrmann U, Kellner R, Ashman K, Niehrs C, Huttner WB.

Proc Natl Acad Sci U S A. 1998 Sep 15;95(19):11134-9.

41.

A hypothesis on the catalytic mechanism of the selenoenzyme thioredoxin reductase.

Gromer S, Wissing J, Behne D, Ashman K, Schirmer RH, Flohé L, Becker K.

Biochem J. 1998 Jun 1;332 ( Pt 2):591-2. No abstract available.

42.

Myosin II is associated with Golgi membranes: identification of p200 as nonmuscle myosin II on Golgi-derived vesicles.

Ikonen E, de Almeid JB, Fath KR, Burgess DR, Ashman K, Simons K, Stow JL.

J Cell Sci. 1997 Sep;110 ( Pt 18):2155-64.

43.

A novel Rab5 GDP/GTP exchange factor complexed to Rabaptin-5 links nucleotide exchange to effector recruitment and function.

Horiuchi H, Lippé R, McBride HM, Rubino M, Woodman P, Stenmark H, Rybin V, Wilm M, Ashman K, Mann M, Zerial M.

Cell. 1997 Sep 19;90(6):1149-59.

44.

Automated protein preparation techniques using a digest robot.

Houthaeve T, Gausepohl H, Ashman K, Nillson T, Mann M.

J Protein Chem. 1997 Jul;16(5):343-8.

PMID:
9246613
45.

cDNA cloning of galectins from third stage larvae of the parasitic nematode Teladorsagia circumcincta.

Newton SE, Monti JR, Greenhalgh CJ, Ashman K, Meeusen EN.

Mol Biochem Parasitol. 1997 Jun;86(2):143-53.

PMID:
9200121
46.
47.

Automation of micro-preparation and enzymatic cleavage of gel electrophoretically separated proteins.

Houthaeve T, Gausepohl H, Mann M, Ashman K.

FEBS Lett. 1995 Nov 27;376(1-2):91-4.

48.
49.

Fasciola hepatica: rapid identification of newly excysted juvenile proteins.

Tkalcevic J, Ashman K, Meeusen E.

Biochem Biophys Res Commun. 1995 Aug 4;213(1):169-74.

PMID:
7639732
50.

Isolation of a larval surface glycoprotein from Haemonchus contortus and its possible role in evading host immunity.

Ashman K, Mather J, Wiltshire C, Jacobs HJ, Meeusen E.

Mol Biochem Parasitol. 1995 Mar;70(1-2):175-9. No abstract available.

PMID:
7637698

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