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Items: 29

1.

Testing the robustness of Citizen Science projects: Evaluating the results of pilot project COMBER.

Chatzigeorgiou G, Faulwetter S, Dailianis T, Smith VS, Koulouri P, Dounas C, Arvanitidis C.

Biodivers Data J. 2016 Dec 21;(4):e10859. doi: 10.3897/BDJ.4.e10859.

2.

Micro-CTvlab: A web based virtual gallery of biological specimens using X-ray microtomography (micro-CT).

Keklikoglou K, Faulwetter S, Chatzinikolaou E, Michalakis N, Filiopoulou I, Minadakis N, Panteri E, Perantinos G, Gougousis A, Arvanitidis C.

Biodivers Data J. 2016 Nov 1;(4):e8740.

3.

Data Policy and Data Sharing Agreement in the LifeWatchGreece Research Infrastructure.

Chatzinikolaou E, Faulwetter S, Mavraki D, Bourtzis T, Arvanitidis C.

Biodivers Data J. 2016 Nov 1;(4):e10849. No abstract available.

4.

LifeWatchGreece: Construction and operation of the National Research Infrastructure (ESFRI).

Arvanitidis C, Chatzinikolaou E, Gerovasileiou V, Panteri E, Bailly N, Minadakis N, Hardisty A, Los W.

Biodivers Data J. 2016 Nov 1;(4):e10791. No abstract available.

5.

CIGESMED for divers: Establishing a citizen science initiative for the mapping and monitoring of coralligenous assemblages in the Mediterranean Sea.

Gerovasileiou V, Dailianis T, Panteri E, Michalakis N, Gatti G, Sini M, Dimitriadis C, Issaris Y, Salomidi M, Filiopoulou I, Doğan A, Thierry de Ville d'Avray L, David R, Ҫinar ME, Koutsoubas D, Féral JP, Arvanitidis C.

Biodivers Data J. 2016 Nov 1;(4):e8692.

6.

LifeWatch Greece data-services: Discovering Biodiversity Data using Semantic Web Technologies.

Minadakis N, Marketakis Y, Doerr M, Bekiari C, Papadakos P, Gougousis A, Bailly N, Arvanitidis C.

Biodivers Data J. 2016 Nov 1;(4):e8443.

7.

Optimized R functions for analysis of ecological community data using the R virtual laboratory (RvLab).

Varsos C, Patkos T, Oulas A, Pavloudi C, Gougousis A, Ijaz UZ, Filiopoulou I, Pattakos N, Vanden Berghe E, Fernández-Guerra A, Faulwetter S, Chatzinikolaou E, Pafilis E, Bekiari C, Doerr M, Arvanitidis C.

Biodivers Data J. 2016 Nov 1;(4):e8357.

8.

Environmental variability and heavy metal concentrations from five lagoons in the Ionian Sea (Amvrakikos Gulf, W Greece).

Vasileiadou K, Pavloudi C, Kalantzi I, Apostolaki ET, Chatzigeorgiou G, Chatzinikolaou E, Pafilis E, Papageorgiou N, Fanini L, Konstas S, Fragopoulou N, Arvanitidis C.

Biodivers Data J. 2016 Nov 1;(4):e8233.

9.

Introduction to the Greek Taxon Information System (GTIS) in LifeWatchGreece: the construction of the Preliminary Checklists of Species of Greece.

Bailly N, Gerovasileiou V, Arvanitidis C, Legakis A.

Biodivers Data J. 2016 Nov 1;(4):e7959. No abstract available.

10.

ReefMedMol: Mollusca from the infralittoral rocky shores - the biocoenosis of photophilic algae - in the Mediterranean Sea.

Poursanidis D, Koutsoubas D, Arvanitidis C, Chatzigeorgiou G.

Biodivers Data J. 2016 Jul 6;(4):e7516.

11.

Imposex and organotin compounds in ports of the Mediterranean and the Atlantic: Is the story over?

Anastasiou TI, Chatzinikolaou E, Mandalakis M, Arvanitidis C.

Sci Total Environ. 2016 Nov 1;569-570:1315-29. doi: 10.1016/j.scitotenv.2016.06.209.

PMID:
27425438
12.

EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation.

Pafilis E, Buttigieg PL, Ferrell B, Pereira E, Schnetzer J, Arvanitidis C, Jensen LJ.

Database (Oxford). 2016 Feb 20;2016. pii: baw005. doi: 10.1093/database/baw005.

13.

Salinity is the major factor influencing the sediment bacterial communities in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea).

Pavloudi C, Oulas A, Vasileiadou K, Sarropoulou E, Kotoulas G, Arvanitidis C.

Mar Genomics. 2016 Aug;28:71-81. doi: 10.1016/j.margen.2016.01.005.

PMID:
26831186
14.

One Step forward: Benthic Pelagic Coupling and Indicators for Environmental Status.

Dimitriou PD, Papageorgiou N, Arvanitidis C, Assimakopoulou G, Pagou K, Papadopoulou KN, Pavlidou A, Pitta P, Reizopoulou S, Simboura N, Karakassis I.

PLoS One. 2015 Oct 23;10(10):e0141071. doi: 10.1371/journal.pone.0141071.

15.

PESI - a taxonomic backbone for Europe.

de Jong Y, Kouwenberg J, Boumans L, Hussey C, Hyam R, Nicolson N, Kirk P, Paton A, Michel E, Guiry MD, Boegh PS, Pedersen HÆ, Enghoff H, von Raab-Straube E, Güntsch A, Geoffroy M, Müller A, Kohlbecker A, Berendsohn W, Appeltans W, Arvanitidis C, Vanhoorne B, Declerck J, Vandepitte L, Hernandez F, Nash R, Costello MJ, Ouvrard D, Bezard-Falgas P, Bourgoin T, Wetzel FT, Glöckler F, Korb G, Ring C, Hagedorn G, Häuser C, Aktaç N, Asan A, Ardelean A, Borges PA, Dhora D, Khachatryan H, Malicky M, Ibrahimov S, Tuzikov A, De Wever A, Moncheva S, Spassov N, Chobot K, Popov A, Boršić I, Sfenthourakis S, Kõljalg U, Uotila P, Olivier G, Dauvin JC, Tarkhnishvili D, Chaladze G, Tuerkay M, Legakis A, Peregovits L, Gudmundsson G, Ólafsson E, Lysaght L, Galil BS, Raimondo FM, Domina G, Stoch F, Minelli A, Spungis V, Budrys E, Olenin S, Turpel A, Walisch T, Krpach V, Gambin MT, Ungureanu L, Karaman G, Kleukers RM, Stur E, Aagaard K, Valland N, Moen TL, Bogdanowicz W, Tykarski P, Węsławski JM, Kędra M, M de Frias Martins A, Abreu AD, Silva R, Medvedev S, Ryss A, Šimić S, Marhold K, Stloukal E, Tome D, Ramos MA, Valdés B, Pina F, Kullander S, Telenius A, Gonseth Y, Tschudin P, Sergeyeva O, Vladymyrov V, Rizun VB, Raper C, Lear D, Stoev P, Penev L, Rubio AC, Backeljau T, Saarenmaa H, Ulenberg S.

Biodivers Data J. 2015 Sep 28;(3):e5848. doi: 10.3897/BDJ.3.e5848.

16.

There are no whole truths in meta-analyses: all their truths are half-truths.

Lyons DA, Arvanitidis C, Blight AJ, Chatzinikolaou E, Guy-Haim T, Kotta J, Queirós AM, Rilov G, Somerfield PJ, Crowe TP.

Glob Chang Biol. 2016 Mar;22(3):968-71. doi: 10.1111/gcb.12989. No abstract available.

PMID:
26033296
17.

Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.

Oulas A, Pavloudi C, Polymenakou P, Pavlopoulos GA, Papanikolaou N, Kotoulas G, Arvanitidis C, Iliopoulos I.

Bioinform Biol Insights. 2015 May 5;9:75-88. doi: 10.4137/BBI.S12462. Review.

18.

ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life.

Pafilis E, Frankild SP, Schnetzer J, Fanini L, Faulwetter S, Pavloudi C, Vasileiadou K, Leary P, Hammock J, Schulz K, Parr CS, Arvanitidis C, Jensen LJ.

Bioinformatics. 2015 Jun 1;31(11):1872-4. doi: 10.1093/bioinformatics/btv045.

19.

A new genus and species of Serpulidae (Annelida, Polychaeta, Sabellida) from the Caribbean Sea.

Prentiss NK, Vasileiadou K, Faulwetter S, Arvanitidis C, Hove HA.

Zootaxa. 2014 Dec 22;3900(2):204-22. doi: 10.11646/zootaxa.3900.2.2.

20.

Scaling up experimental ocean acidification and warming research: from individuals to the ecosystem.

Queirós AM, Fernandes JA, Faulwetter S, Nunes J, Rastrick SP, Mieszkowska N, Artioli Y, Yool A, Calosi P, Arvanitidis C, Findlay HS, Barange M, Cheung WW, Widdicombe S.

Glob Chang Biol. 2015 Jan;21(1):130-43. doi: 10.1111/gcb.12675.

PMID:
25044416
21.

Macroalgal blooms alter community structure and primary productivity in marine ecosystems.

Lyons DA, Arvanitidis C, Blight AJ, Chatzinikolaou E, Guy-Haim T, Kotta J, Orav-Kotta H, Queirós AM, Rilov G, Somerfield PJ, Crowe TP.

Glob Chang Biol. 2014 Sep;20(9):2712-24. doi: 10.1111/gcb.12644. Review.

PMID:
24890042
22.

Polytraits: A database on biological traits of marine polychaetes.

Faulwetter S, Markantonatou V, Pavloudi C, Papageorgiou N, Keklikoglou K, Chatzinikolaou E, Pafilis E, Chatzigeorgiou G, Vasileiadou K, Dailianis T, Fanini L, Koulouri P, Arvanitidis C.

Biodivers Data J. 2014 Jan 17;(2):e1024. doi: 10.3897/BDJ.2.e1024.

23.

The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text.

Pafilis E, Frankild SP, Fanini L, Faulwetter S, Pavloudi C, Vasileiadou A, Arvanitidis C, Jensen LJ.

PLoS One. 2013 Jun 18;8(6):e65390. doi: 10.1371/journal.pone.0065390.

24.

Micro-computed tomography: Introducing new dimensions to taxonomy.

Faulwetter S, Vasileiadou A, Kouratoras M, Thanos Dailianis, Arvanitidis C.

Zookeys. 2013 Feb 4;(263):1-45. doi: 10.3897/zookeys.263.4261.

25.

A decadal view of biodiversity informatics: challenges and priorities.

Hardisty A, Roberts D; Biodiversity Informatics Community., Addink W, Aelterman B, Agosti D, Amaral-Zettler L, Ariño AH, Arvanitidis C, Backeljau T, Bailly N, Belbin L, Berendsohn W, Bertrand N, Caithness N, Campbell D, Cochrane G, Conruyt N, Culham A, Damgaard C, Davies N, Fady B, Faulwetter S, Feest A, Field D, Garnier E, Geser G, Gilbert J, Grosche, Grosser D, Hardisty A, Herbinet B, Hobern D, Jones A, de Jong Y, King D, Knapp S, Koivula H, Los W, Meyer C, Morris RA, Morrison N, Morse D, Obst M, Pafilis E, Page LM, Page R, Pape T, Parr C, Paton A, Patterson D, Paymal E, Penev L, Pollet M, Pyle R, von Raab-Straube E, Robert V, Roberts D, Robertson T, Rovellotti O, Saarenmaa H, Schalk P, Schaminee J, Schofield P, Sier A, Sierra S, Smith V, van Spronsen E, Thornton-Wood S, van Tienderen P, van Tol J, Tuama ÉÓ, Uetz P, Vaas L, Vignes Lebbe R, Vision T, Vu D, De Wever A, White R, Willis K, Young F.

BMC Ecol. 2013 Apr 15;13:16. doi: 10.1186/1472-6785-13-16. Review.

26.

MidMedPol: Polychaetes from midlittoral rocky shores in Greece and Italy (Mediterranean Sea).

Keklikoglou K, Faulwetter S, Chatzigeorgiou G, Badalamenti F, Kitsos MS, Arvanitidis C.

Biodivers Data J. 2013 Sep 16;(1):e961. doi: 10.3897/BDJ.1.e961.

27.

Sphaerosyllis levantina sp. n. (Annelida) from the eastern Mediterranean, with notes on character variation in Sphaerosyllis hystrix Claparède, 1863.

Faulwetter S, Chatzigeorgiou G, Galil BS, Nicolaidou A, Arvanitidis C.

Zookeys. 2011;(150):327-45. doi: 10.3897/zookeys.150.1877.

28.
29.

Engaging the broader community in biodiversity research: the concept of the COMBER pilot project for divers in ViBRANT.

Arvanitidis C, Faulwetter S, Chatzigeorgiou G, Penev L, Bánki O, Dailianis T, Pafilis E, Kouratoras M, Chatzinikolaou E, Fanini L, Vasileiadou A, Pavloudi C, Vavilis P, Koulouri P, Dounas C.

Zookeys. 2011;(150):211-29. doi: 10.3897/zookeys.150.2149.

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