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Items: 1 to 50 of 75

1.

Structure determination using solution NMR: Is it worth the effort?

Takeuchi K, Baskaran K, Arthanari H.

J Magn Reson. 2019 Sep;306:195-201. doi: 10.1016/j.jmr.2019.07.045. Epub 2019 Jul 13.

PMID:
31345771
2.

Emerging solution NMR methods to illuminate the structural and dynamic properties of proteins.

Arthanari H, Takeuchi K, Dubey A, Wagner G.

Curr Opin Struct Biol. 2019 Jul 19. pii: S0959-440X(18)30113-1. doi: 10.1016/j.sbi.2019.06.005. [Epub ahead of print] Review.

PMID:
31327528
3.

Correction to "Abietane-Type Diterpenoids Inhibit Protein Tyrosine Phosphatases by Stabilizing an Inactive Enzyme Conformation".

Hjortness MK, Riccardi L, Hongdusit A, Ruppe A, Zhao M, Kim EY, Zwart PH, Sankaran B, Arthanari H, Sousa MC, De Vivo M, Fox JM.

Biochemistry. 2019 Jun 18;58(24):2797. doi: 10.1021/acs.biochem.9b00423. Epub 2019 Jun 5. No abstract available.

PMID:
31181901
4.

Aromatic 19F-13C TROSY: a background-free approach to probe biomolecular structure, function, and dynamics.

Boeszoermenyi A, Chhabra S, Dubey A, Radeva DL, Burdzhiev NT, Chanev CD, Petrov OI, Gelev VM, Zhang M, Anklin C, Kovacs H, Wagner G, Kuprov I, Takeuchi K, Arthanari H.

Nat Methods. 2019 Apr;16(4):333-340. doi: 10.1038/s41592-019-0334-x. Epub 2019 Mar 11.

5.

NMR: an essential structural tool for integrative studies of T cell development, pMHC ligand recognition and TCR mechanobiology.

Mallis RJ, Brazin KN, Duke-Cohan JS, Hwang W, Wang JH, Wagner G, Arthanari H, Lang MJ, Reinherz EL.

J Biomol NMR. 2019 Jul;73(6-7):319-332. doi: 10.1007/s10858-019-00234-8. Epub 2019 Feb 27.

PMID:
30815789
6.

Backbone resonance assignments of innate immune evasion protein EapH2 from the S. aureus.

Herrera AI, Dubey A, Geisbrecht BV, Arthanari H, Prakash O.

Biomol NMR Assign. 2019 Apr;13(1):219-222. doi: 10.1007/s12104-019-09880-3. Epub 2019 Feb 7.

PMID:
30729401
7.

Nonuniform Sampling for NMR Spectroscopy.

Robson S, Arthanari H, Hyberts SG, Wagner G.

Methods Enzymol. 2019;614:263-291. doi: 10.1016/bs.mie.2018.09.009. Epub 2018 Oct 26.

PMID:
30611427
8.

The T Cell Antigen Receptor α Transmembrane Domain Coordinates Triggering through Regulation of Bilayer Immersion and CD3 Subunit Associations.

Brazin KN, Mallis RJ, Boeszoermenyi A, Feng Y, Yoshizawa A, Reche PA, Kaur P, Bi K, Hussey RE, Duke-Cohan JS, Song L, Wagner G, Arthanari H, Lang MJ, Reinherz EL.

Immunity. 2018 Nov 20;49(5):829-841.e6. doi: 10.1016/j.immuni.2018.09.007. Epub 2018 Oct 30.

PMID:
30389415
9.

Abietane-Type Diterpenoids Inhibit Protein Tyrosine Phosphatases by Stabilizing an Inactive Enzyme Conformation.

Hjortness MK, Riccardi L, Hongdusit A, Ruppe A, Zhao M, Kim EY, Zwart PH, Sankaran B, Arthanari H, Sousa MC, De Vivo M, Fox JM.

Biochemistry. 2018 Oct 9;57(40):5886-5896. doi: 10.1021/acs.biochem.8b00655. Epub 2018 Sep 14. Erratum in: Biochemistry. 2019 Jun 18;58(24):2797.

10.

Optimal control theory enables homonuclear decoupling without Bloch-Siegert shifts in NMR spectroscopy.

Coote PW, Robson SA, Dubey A, Boeszoermenyi A, Zhao M, Wagner G, Arthanari H.

Nat Commun. 2018 Aug 1;9(1):3014. doi: 10.1038/s41467-018-05400-4.

11.

Structural basis for LeishIF4E-1 modulation by an interacting protein in the human parasite Leishmania major.

Meleppattu S, Arthanari H, Zinoviev A, Boeszoermenyi A, Wagner G, Shapira M, Léger-Abraham M.

Nucleic Acids Res. 2018 Apr 20;46(7):3791-3801. doi: 10.1093/nar/gky194.

12.

15N detection harnesses the slow relaxation property of nitrogen: Delivering enhanced resolution for intrinsically disordered proteins.

Chhabra S, Fischer P, Takeuchi K, Dubey A, Ziarek JJ, Boeszoermenyi A, Mathieu D, Bermel W, Davey NE, Wagner G, Arthanari H.

Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):E1710-E1719. doi: 10.1073/pnas.1717560115. Epub 2018 Feb 5.

13.

Mixed pyruvate labeling enables backbone resonance assignment of large proteins using a single experiment.

Robson SA, Takeuchi K, Boeszoermenyi A, Coote PW, Dubey A, Hyberts S, Wagner G, Arthanari H.

Nat Commun. 2018 Jan 24;9(1):356. doi: 10.1038/s41467-017-02767-8.

14.

Erratum to: Nitrogen detected TROSY at high field yields high resolution and sensitivity for protein NMR.

Takeuchi K, Arthanari H, Shimada I, Wagner G.

J Biomol NMR. 2017 Dec;69(4):245. doi: 10.1007/s10858-017-0131-8.

PMID:
29230599
15.

NMR-directed design of pre-TCRβ and pMHC molecules implies a distinct geometry for pre-TCR relative to αβTCR recognition of pMHC.

Mallis RJ, Arthanari H, Lang MJ, Reinherz EL, Wagner G.

J Biol Chem. 2018 Jan 19;293(3):754-766. doi: 10.1074/jbc.M117.813493. Epub 2017 Nov 3.

16.

CDK4/6 Inhibition Augments Antitumor Immunity by Enhancing T-cell Activation.

Deng J, Wang ES, Jenkins RW, Li S, Dries R, Yates K, Chhabra S, Huang W, Liu H, Aref AR, Ivanova E, Paweletz CP, Bowden M, Zhou CW, Herter-Sprie GS, Sorrentino JA, Bisi JE, Lizotte PH, Merlino AA, Quinn MM, Bufe LE, Yang A, Zhang Y, Zhang H, Gao P, Chen T, Cavanaugh ME, Rode AJ, Haines E, Roberts PJ, Strum JC, Richards WG, Lorch JH, Parangi S, Gunda V, Boland GM, Bueno R, Palakurthi S, Freeman GJ, Ritz J, Haining WN, Sharpless NE, Arthanari H, Shapiro GI, Barbie DA, Gray NS, Wong KK.

Cancer Discov. 2018 Feb;8(2):216-233. doi: 10.1158/2159-8290.CD-17-0915. Epub 2017 Nov 3.

17.

Modulation of RNA primer formation by Mn(II)-substituted T7 DNA primase.

Ilic S, Akabayov SR, Froimovici R, Meiry R, Vilenchik D, Hernandez A, Arthanari H, Akabayov B.

Sci Rep. 2017 Jul 19;7(1):5797. doi: 10.1038/s41598-017-05534-3.

18.

1H, 13C, and 15N backbone chemical shift assignments of 4E-BP144-87 and 4E-BP144-87 bound to eIF4E.

Sekiyama N, Boeszoermenyi A, Arthanari H, Wagner G, Léger-Abraham M.

Biomol NMR Assign. 2017 Oct;11(2):187-191. doi: 10.1007/s12104-017-9744-9. Epub 2017 Jun 6.

19.

Rapid convergence of optimal control in NMR using numerically-constructed toggling frames.

Coote P, Anklin C, Massefski W, Wagner G, Arthanari H.

J Magn Reson. 2017 Aug;281:94-103. doi: 10.1016/j.jmr.2017.05.011. Epub 2017 May 25.

20.

Molecular Landscape of the Ribosome Pre-initiation Complex during mRNA Scanning: Structural Role for eIF3c and Its Control by eIF5.

Obayashi E, Luna RE, Nagata T, Martin-Marcos P, Hiraishi H, Singh CR, Erzberger JP, Zhang F, Arthanari H, Morris J, Pellarin R, Moore C, Harmon I, Papadopoulos E, Yoshida H, Nasr ML, Unzai S, Thompson B, Aube E, Hustak S, Stengel F, Dagraca E, Ananbandam A, Gao P, Urano T, Hinnebusch AG, Wagner G, Asano K.

Cell Rep. 2017 Mar 14;18(11):2651-2663. doi: 10.1016/j.celrep.2017.02.052.

21.

Perspective: revisiting the field dependence of TROSY sensitivity.

Takeuchi K, Arthanari H, Wagner G.

J Biomol NMR. 2016 Dec;66(4):221-225. doi: 10.1007/s10858-016-0075-4. Epub 2016 Nov 19.

22.

Identification of DNA primase inhibitors via a combined fragment-based and virtual screening.

Ilic S, Akabayov SR, Arthanari H, Wagner G, Richardson CC, Akabayov B.

Sci Rep. 2016 Nov 2;6:36322. doi: 10.1038/srep36322.

23.

Solution Structure of the Cuz1 AN1 Zinc Finger Domain: An Exposed LDFLP Motif Defines a Subfamily of AN1 Proteins.

Sun ZJ, Bhanu MK, Allan MG, Arthanari H, Wagner G, Hanna J.

PLoS One. 2016 Sep 23;11(9):e0163660. doi: 10.1371/journal.pone.0163660. eCollection 2016.

24.

Analytical optimization of active bandwidth and quality factor for TOCSY experiments in NMR spectroscopy.

Coote P, Bermel W, Wagner G, Arthanari H.

J Biomol NMR. 2016 Sep;66(1):9-20. doi: 10.1007/s10858-016-0051-z. Epub 2016 Aug 11.

25.

Inhibiting fungal multidrug resistance by disrupting an activator-Mediator interaction.

Nishikawa JL, Boeszoermenyi A, Vale-Silva LA, Torelli R, Posteraro B, Sohn YJ, Ji F, Gelev V, Sanglard D, Sanguinetti M, Sadreyev RI, Mukherjee G, Bhyravabhotla J, Buhrlage SJ, Gray NS, Wagner G, Näär AM, Arthanari H.

Nature. 2016 Feb 25;530(7591):485-9. doi: 10.1038/nature16963. Epub 2016 Feb 17.

26.

Nitrogen-detected TROSY yields comparable sensitivity to proton-detected TROSY for non-deuterated, large proteins under physiological salt conditions.

Takeuchi K, Arthanari H, Imai M, Wagner G, Shimada I.

J Biomol NMR. 2016 Feb;64(2):143-51. doi: 10.1007/s10858-016-0015-3. Epub 2016 Jan 22.

27.

Nitrogen detected TROSY at high field yields high resolution and sensitivity for protein NMR.

Takeuchi K, Arthanari H, Shimada I, Wagner G.

J Biomol NMR. 2015 Dec;63(4):323-331. doi: 10.1007/s10858-015-9991-y. Epub 2015 Oct 23. Erratum in: J Biomol NMR. 2017 Dec 11;:.

28.

Structure of a CGI-58 motif provides the molecular basis of lipid droplet anchoring.

Boeszoermenyi A, Nagy HM, Arthanari H, Pillip CJ, Lindermuth H, Luna RE, Wagner G, Zechner R, Zangger K, Oberer M.

J Biol Chem. 2015 Oct 30;290(44):26361-72. doi: 10.1074/jbc.M115.682203. Epub 2015 Sep 8.

29.

Backbone resonance assignment of N15, N30 and D10 T cell receptor β subunits.

Mallis RJ, Reinherz EL, Wagner G, Arthanari H.

Biomol NMR Assign. 2016 Apr;10(1):35-9. doi: 10.1007/s12104-015-9632-0. Epub 2015 Aug 15.

30.

Molecular mechanism of the dual activity of 4EGI-1: Dissociating eIF4G from eIF4E but stabilizing the binding of unphosphorylated 4E-BP1.

Sekiyama N, Arthanari H, Papadopoulos E, Rodriguez-Mias RA, Wagner G, Léger-Abraham M.

Proc Natl Acad Sci U S A. 2015 Jul 28;112(30):E4036-45. doi: 10.1073/pnas.1512118112. Epub 2015 Jul 13.

31.

Structure of a herpesvirus nuclear egress complex subunit reveals an interaction groove that is essential for viral replication.

Leigh KE, Sharma M, Mansueto MS, Boeszoermenyi A, Filman DJ, Hogle JM, Wagner G, Coen DM, Arthanari H.

Proc Natl Acad Sci U S A. 2015 Jul 21;112(29):9010-5. doi: 10.1073/pnas.1511140112. Epub 2015 Jul 6.

32.

Pre-TCR ligand binding impacts thymocyte development before αβTCR expression.

Mallis RJ, Bai K, Arthanari H, Hussey RE, Handley M, Li Z, Chingozha L, Duke-Cohan JS, Lu H, Wang JH, Zhu C, Wagner G, Reinherz EL.

Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8373-8. doi: 10.1073/pnas.1504971112. Epub 2015 Jun 8.

33.

An RNA-binding Protein, Lin28, Recognizes and Remodels G-quartets in the MicroRNAs (miRNAs) and mRNAs It Regulates.

O'Day E, Le MT, Imai S, Tan SM, Kirchner R, Arthanari H, Hofmann O, Wagner G, Lieberman J.

J Biol Chem. 2015 Jul 17;290(29):17909-22. doi: 10.1074/jbc.M115.665521. Epub 2015 Jun 4.

34.

eIF1A augments Ago2-mediated Dicer-independent miRNA biogenesis and RNA interference.

Yi T, Arthanari H, Akabayov B, Song H, Papadopoulos E, Qi HH, Jedrychowski M, Güttler T, Guo C, Luna RE, Gygi SP, Huang SA, Wagner G.

Nat Commun. 2015 May 28;6:7194. doi: 10.1038/ncomms8194.

35.

Increased resolution of aromatic cross peaks using alternate 13C labeling and TROSY.

Milbradt AG, Arthanari H, Takeuchi K, Boeszoermenyi A, Hagn F, Wagner G.

J Biomol NMR. 2015 Jul;62(3):291-301. doi: 10.1007/s10858-015-9944-5. Epub 2015 May 10.

36.

Fatty Acid-binding Proteins Interact with Comparative Gene Identification-58 Linking Lipolysis with Lipid Ligand Shuttling.

Hofer P, Boeszoermenyi A, Jaeger D, Feiler U, Arthanari H, Mayer N, Zehender F, Rechberger G, Oberer M, Zimmermann R, Lass A, Haemmerle G, Breinbauer R, Zechner R, Preiss-Landl K.

J Biol Chem. 2015 Jul 24;290(30):18438-53. doi: 10.1074/jbc.M114.628958. Epub 2015 May 7.

37.

Structure of the eukaryotic translation initiation factor eIF4E in complex with 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G.

Papadopoulos E, Jenni S, Kabha E, Takrouri KJ, Yi T, Salvi N, Luna RE, Gavathiotis E, Mahalingam P, Arthanari H, Rodriguez-Mias R, Yefidoff-Freedman R, Aktas BH, Chorev M, Halperin JA, Wagner G.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):E3187-95. doi: 10.1073/pnas.1410250111. Epub 2014 Jul 21.

38.

A new broadband homonuclear mixing pulse for NMR with low applied power.

Coote P, Leigh KE, Yu TY, Khaneja N, Wagner G, Arthanari H.

J Chem Phys. 2014 Jul 14;141(2):024201. doi: 10.1063/1.4885853.

39.

Selective methyl labeling of eukaryotic membrane proteins using cell-free expression.

Linser R, Gelev V, Hagn F, Arthanari H, Hyberts SG, Wagner G.

J Am Chem Soc. 2014 Aug 13;136(32):11308-10. doi: 10.1021/ja504791j. Epub 2014 Jun 27.

40.

Constitutively oxidized CXXC motifs within the CD3 heterodimeric ectodomains of the T cell receptor complex enforce the conformation of juxtaposed segments.

Brazin KN, Mallis RJ, Li C, Keskin DB, Arthanari H, Gao Y, Wu SL, Karger BL, Wagner G, Reinherz EL.

J Biol Chem. 2014 Jul 4;289(27):18880-92. doi: 10.1074/jbc.M114.574996. Epub 2014 May 21. Erratum in: J Biol Chem. 2015 Jan 2;290(1):239.

41.

Perspectives in magnetic resonance: NMR in the post-FFT era.

Hyberts SG, Arthanari H, Robson SA, Wagner G.

J Magn Reson. 2014 Apr;241:60-73. doi: 10.1016/j.jmr.2013.11.014. Review.

42.

The interaction between eukaryotic initiation factor 1A and eIF5 retains eIF1 within scanning preinitiation complexes.

Luna RE, Arthanari H, Hiraishi H, Akabayov B, Tang L, Cox C, Markus MA, Luna LE, Ikeda Y, Watanabe R, Bedoya E, Yu C, Alikhan S, Wagner G, Asano K.

Biochemistry. 2013 Dec 31;52(52):9510-8. doi: 10.1021/bi4009775. Epub 2013 Dec 19.

43.

Resonance assignments of the microtubule-binding domain of the C. elegans spindle and kinetochore-associated protein 1.

Boeszoermenyi A, Schmidt JC, Cheeseman IM, Oberer M, Wagner G, Arthanari H.

Biomol NMR Assign. 2014 Oct;8(2):275-8. doi: 10.1007/s12104-013-9499-x. Epub 2013 Jun 14.

44.

Pulse design for broadband correlation NMR spectroscopy by multi-rotating frames.

Coote P, Arthanari H, Yu TY, Natarajan A, Wagner G, Khaneja N.

J Biomol NMR. 2013 Mar;55(3):291-302. doi: 10.1007/s10858-013-9714-1. Epub 2013 Feb 19.

45.

The kinetochore-bound Ska1 complex tracks depolymerizing microtubules and binds to curved protofilaments.

Schmidt JC, Arthanari H, Boeszoermenyi A, Dashkevich NM, Wilson-Kubalek EM, Monnier N, Markus M, Oberer M, Milligan RA, Bathe M, Wagner G, Grishchuk EL, Cheeseman IM.

Dev Cell. 2012 Nov 13;23(5):968-80. doi: 10.1016/j.devcel.2012.09.012. Epub 2012 Oct 18. Erratum in: Dev Cell. 2012 Nov 13;23(5):1081.

46.

The C-terminal domain of eukaryotic initiation factor 5 promotes start codon recognition by its dynamic interplay with eIF1 and eIF2β.

Luna RE, Arthanari H, Hiraishi H, Nanda J, Martin-Marcos P, Markus MA, Akabayov B, Milbradt AG, Luna LE, Seo HC, Hyberts SG, Fahmy A, Reibarkh M, Miles D, Hagner PR, O'Day EM, Yi T, Marintchev A, Hinnebusch AG, Lorsch JR, Asano K, Wagner G.

Cell Rep. 2012 Jun 28;1(6):689-702. doi: 10.1016/j.celrep.2012.04.007. Epub 2012 May 24.

47.

(1)H, (13)C, and (15)N chemical shift assignments for PfPMT, a phosphoethanolamine methyltransferase from Plasmodium falciparum.

Bezsonova I, Rujan I, Bobenchik AM, Gorbatyuk V, Maciejewski MW, Gorbatyuk O, Hao B, Arthanari H, Mamoun CB, Hoch JC.

Biomol NMR Assign. 2013 Apr;7(1):17-20. doi: 10.1007/s12104-012-9372-3. Epub 2012 Mar 6.

48.

Application of iterative soft thresholding for fast reconstruction of NMR data non-uniformly sampled with multidimensional Poisson Gap scheduling.

Hyberts SG, Milbradt AG, Wagner AB, Arthanari H, Wagner G.

J Biomol NMR. 2012 Apr;52(4):315-27. doi: 10.1007/s10858-012-9611-z. Epub 2012 Feb 14.

49.

Molecular characterization of disrupted in schizophrenia-1 risk variant S704C reveals the formation of altered oligomeric assembly.

Narayanan S, Arthanari H, Wolfe MS, Wagner G.

J Biol Chem. 2011 Dec 23;286(51):44266-76. doi: 10.1074/jbc.M111.271593. Epub 2011 Oct 13.

50.

Complexes of native ubiquitin and dodecyl sulfate illustrate the nature of hydrophobic and electrostatic interactions in the binding of proteins and surfactants.

Shaw BF, Schneider GF, Arthanari H, Narovlyansky M, Moustakas D, Durazo A, Wagner G, Whitesides GM.

J Am Chem Soc. 2011 Nov 9;133(44):17681-95. doi: 10.1021/ja205735q. Epub 2011 Oct 13.

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