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Items: 18

1.

Fast and accurate bacterial species identification in urine specimens using LC-MS/MS mass spectrometry and machine learning.

Roux-Dalvai F, Gotti C, Leclercq M, Hélie MC, Boissinot M, Arrey TN, Dauly C, Fournier F, Kelly I, Marcoux J, Bestman-Smith J, Bergeron MG, Droit A.

Mol Cell Proteomics. 2019 Oct 4. pii: mcp.TIR119.001559. doi: 10.1074/mcp.TIR119.001559. [Epub ahead of print]

2.

Performance Evaluation of the Q Exactive HF-X for Shotgun Proteomics.

Kelstrup CD, Bekker-Jensen DB, Arrey TN, Hogrebe A, Harder A, Olsen JV.

J Proteome Res. 2018 Jan 5;17(1):727-738. doi: 10.1021/acs.jproteome.7b00602. Epub 2017 Dec 20.

PMID:
29183128
3.

APP Is a Context-Sensitive Regulator of the Hippocampal Presynaptic Active Zone.

Laßek M, Weingarten J, Wegner M, Mueller BF, Rohmer M, Baeumlisberger D, Arrey TN, Hick M, Ackermann J, Acker-Palmer A, Koch I, Müller U, Karas M, Volknandt W.

PLoS Comput Biol. 2016 Apr 19;12(4):e1004832. doi: 10.1371/journal.pcbi.1004832. eCollection 2016 Apr.

4.

A Mitochondrial Role of SV2a Protein in Aging and Alzheimer's Disease: Studies with Levetiracetam.

Stockburger C, Miano D, Baeumlisberger M, Pallas T, Arrey TN, Karas M, Friedland K, Müller WE.

J Alzheimers Dis. 2016;50(1):201-15. doi: 10.3233/JAD-150687.

PMID:
26639968
5.

Detailed Functional and Proteomic Characterization of Fludarabine Resistance in Mantle Cell Lymphoma Cells.

Lorkova L, Scigelova M, Arrey TN, Vit O, Pospisilova J, Doktorova E, Klanova M, Alam M, Vockova P, Maswabi B, Klener P Jr, Petrak J.

PLoS One. 2015 Aug 18;10(8):e0135314. doi: 10.1371/journal.pone.0135314. eCollection 2015.

6.

Rapid and deep proteomes by faster sequencing on a benchtop quadrupole ultra-high-field Orbitrap mass spectrometer.

Kelstrup CD, Jersie-Christensen RR, Batth TS, Arrey TN, Kuehn A, Kellmann M, Olsen JV.

J Proteome Res. 2014 Dec 5;13(12):6187-95. doi: 10.1021/pr500985w. Epub 2014 Nov 10.

PMID:
25349961
7.

Perfusion reversed-phase high-performance liquid chromatography for protein separation from detergent-containing solutions: an alternative to gel-based approaches.

Gorka J, Rohmer M, Bornemann S, Papasotiriou DG, Baeumlisberger D, Arrey TN, Bahr U, Karas M.

Anal Biochem. 2012 May 15;424(2):97-107. doi: 10.1016/j.ab.2012.02.021. Epub 2012 Feb 25.

PMID:
22370273
8.

Phosphorylation site localization in peptides by MALDI MS/MS and the Mascot Delta Score.

Lemeer S, Kunold E, Klaeger S, Raabe M, Towers MW, Claudes E, Arrey TN, Strupat K, Urlaub H, Kuster B.

Anal Bioanal Chem. 2012 Jan;402(1):249-60. doi: 10.1007/s00216-011-5469-2. Epub 2011 Oct 25.

PMID:
22038583
9.

Fast quantitative determination of melamine and its derivatives by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Arnold A, Arrey TN, Karas M, Persike M.

Rapid Commun Mass Spectrom. 2011 Oct 15;25(19):2844-50. doi: 10.1002/rcm.5170.

PMID:
21913263
10.

Lipid particles/droplets of the yeast Saccharomyces cerevisiae revisited: lipidome meets proteome.

Grillitsch K, Connerth M, Köfeler H, Arrey TN, Rietschel B, Wagner B, Karas M, Daum G.

Biochim Biophys Acta. 2011 Dec;1811(12):1165-76. doi: 10.1016/j.bbalip.2011.07.015. Epub 2011 Jul 26.

11.

Simple dual-spotting procedure enhances nLC-MALDI MS/MS analysis of digests with less specific enzymes.

Baeumlisberger D, Rohmer M, Arrey TN, Mueller BF, Beckhaus T, Bahr U, Barka G, Karas M.

J Proteome Res. 2011 Jun 3;10(6):2889-94. doi: 10.1021/pr2001644. Epub 2011 Apr 22.

PMID:
21480673
12.

The leukemogenic AF4-MLL fusion protein causes P-TEFb kinase activation and altered epigenetic signatures.

Benedikt A, Baltruschat S, Scholz B, Bursen A, Arrey TN, Meyer B, Varagnolo L, Müller AM, Karas M, Dingermann T, Marschalek R.

Leukemia. 2011 Jan;25(1):135-44. doi: 10.1038/leu.2010.249. Epub 2010 Oct 29.

PMID:
21030982
13.

Labeling elastase digests with TMT: informational gain by identification of poorly detectable peptides with MALDI-TOF/TOF mass spectrometry.

Baeumlisberger D, Arrey TN, Rietschel B, Rohmer M, Papasotiriou DG, Mueller B, Beckhaus T, Karas M.

Proteomics. 2010 Nov;10(21):3905-9. doi: 10.1002/pmic.201000288.

PMID:
20925058
14.

Identification of novel human adipocyte secreted proteins by using SGBS cells.

Rosenow A, Arrey TN, Bouwman FG, Noben JP, Wabitsch M, Mariman EC, Karas M, Renes J.

J Proteome Res. 2010 Oct 1;9(10):5389-401. doi: 10.1021/pr100621g.

PMID:
20681635
15.

Approaching the complexity of elastase-digested membrane proteomes using off-gel IEF/nLC-MALDI-MS/MS.

Arrey TN, Rietschel B, Papasotiriou DG, Bornemann S, Baeumlisberger D, Karas M, Meyer B.

Anal Chem. 2010 Mar 1;82(5):2145-9. doi: 10.1021/ac902776h.

PMID:
20136094
16.

Membrane protein analysis using an improved peptic in-solution digestion protocol.

Rietschel B, Bornemann S, Arrey TN, Baeumlisberger D, Karas M, Meyer B.

Proteomics. 2009 Dec;9(24):5553-7. doi: 10.1002/pmic.200900532.

PMID:
20017156
17.

The benefit of combining nLC-MALDI-Orbitrap MS data with nLC-MALDI-TOF/TOF data for proteomic analyses employing elastase.

Rietschel B, Baeumlisberger D, Arrey TN, Bornemann S, Rohmer M, Schuerken M, Karas M, Meyer B.

J Proteome Res. 2009 Nov;8(11):5317-24. doi: 10.1021/pr900557k.

PMID:
19725589
18.

Elastase digests: new ammunition for shotgun membrane proteomics.

Rietschel B, Arrey TN, Meyer B, Bornemann S, Schuerken M, Karas M, Poetsch A.

Mol Cell Proteomics. 2009 May;8(5):1029-43. doi: 10.1074/mcp.M800223-MCP200. Epub 2008 Dec 30.

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