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Items: 1 to 50 of 121

1.

New molecular interactions broaden the functions of the RNA chaperone Hfq.

Dos Santos RF, Arraiano CM, Andrade JM.

Curr Genet. 2019 May 18. doi: 10.1007/s00294-019-00990-y. [Epub ahead of print] Review.

PMID:
31104083
2.

SraL sRNA interaction regulates the terminator by preventing premature transcription termination of rho mRNA.

Silva IJ, Barahona S, Eyraud A, Lalaouna D, Figueroa-Bossi N, Massé E, Arraiano CM.

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3042-3051. doi: 10.1073/pnas.1811589116. Epub 2019 Feb 4.

PMID:
30718400
3.

Pneumococcal RNase R globally impacts protein synthesis by regulating the amount of actively translating ribosomes.

Bárria C, Domingues S, Arraiano CM.

RNA Biol. 2019 Feb;16(2):211-219. doi: 10.1080/15476286.2018.1564616. Epub 2019 Jan 13.

PMID:
30608212
4.

Identification of temperature-sensitive mutations and characterization of thermolabile RNase II variants.

Reis FP, Bárria C, Gomez-Puertas P, Gomes CM, Arraiano CM.

FEBS Lett. 2019 Feb;593(3):352-360. doi: 10.1002/1873-3468.13313. Epub 2018 Dec 28.

PMID:
30536706
5.

Characterizing the Role of Exoribonucleases in the Control of Microbial Gene Expression: Differential RNA-Seq.

Pobre V, Arraiano CM.

Methods Enzymol. 2018;612:1-24. doi: 10.1016/bs.mie.2018.08.010. Epub 2018 Sep 22.

PMID:
30502937
6.

PNPase is involved in the coordination of mRNA degradation and expression in stationary phase cells of Escherichia coli.

Dressaire C, Pobre V, Laguerre S, Girbal L, Arraiano CM, Cocaign-Bousquet M.

BMC Genomics. 2018 Nov 29;19(1):848. doi: 10.1186/s12864-018-5259-8.

7.

Stories of the future: manipulating RNA and Intra/Interkingdom communication.

Arraiano CM.

Microb Biotechnol. 2019 Jan;12(1):48-50. doi: 10.1111/1751-7915.13344. Epub 2018 Nov 28. No abstract available.

8.

Major 3'-5' Exoribonucleases in the Metabolism of Coding and Non-coding RNA.

Dos Santos RF, Quendera AP, Boavida S, Seixas AF, Arraiano CM, Andrade JM.

Prog Mol Biol Transl Sci. 2018;159:101-155. doi: 10.1016/bs.pmbts.2018.07.005. Epub 2018 Aug 25.

PMID:
30340785
9.

The acetate uptake transporter family motif "NPAPLGL(M/S)" is essential for substrate uptake.

Ribas D, Soares-Silva I, Vieira D, Sousa-Silva M, Sá-Pessoa J, Azevedo-Silva J, Viegas SC, Arraiano CM, Diallinas G, Paiva S, Soares P, Casal M.

Fungal Genet Biol. 2019 Jan;122:1-10. doi: 10.1016/j.fgb.2018.10.001. Epub 2018 Oct 16.

PMID:
30339831
10.

Sinorhizobium meliloti RNase III: Catalytic Features and Impact on Symbiosis.

Saramago M, Robledo M, Matos RG, Jiménez-Zurdo JI, Arraiano CM.

Front Genet. 2018 Aug 28;9:350. doi: 10.3389/fgene.2018.00350. eCollection 2018.

11.

Modulating Heterologous Gene Expression with Portable mRNA-Stabilizing 5'-UTR Sequences.

Viegas SC, Apura P, Martínez-García E, de Lorenzo V, Arraiano CM.

ACS Synth Biol. 2018 Sep 21;7(9):2177-2188. doi: 10.1021/acssynbio.8b00191. Epub 2018 Aug 14.

PMID:
30064211
12.

DIS3 isoforms vary in their endoribonuclease activity and are differentially expressed within haematological cancers.

Robinson SR, Viegas SC, Matos RG, Domingues S, Bedir M, Stewart HJS, Chevassut TJ, Oliver AW, Arraiano CM, Newbury SF.

Biochem J. 2018 Jun 29;475(12):2091-2105. doi: 10.1042/BCJ20170962.

13.

The RNA-binding protein Hfq is important for ribosome biogenesis and affects translation fidelity.

Andrade JM, Dos Santos RF, Chelysheva I, Ignatova Z, Arraiano CM.

EMBO J. 2018 Jun 1;37(11). pii: e97631. doi: 10.15252/embj.201797631. Epub 2018 Apr 18.

14.

Stress Response Protein BolA Influences Fitness and Promotes Salmonella enterica Serovar Typhimurium Virulence.

Mil-Homens D, Barahona S, Moreira RN, Silva IJ, Pinto SN, Fialho AM, Arraiano CM.

Appl Environ Microbiol. 2018 Apr 2;84(8). pii: e02850-17. doi: 10.1128/AEM.02850-17. Print 2018 Apr 15.

15.

Biochemical characterization of Campylobacter jejuni PNPase, an exoribonuclease important for bacterial pathogenicity.

Casinhas J, Matos RG, Haddad N, Arraiano CM.

Biochimie. 2018 Apr;147:70-79. doi: 10.1016/j.biochi.2018.01.001. Epub 2018 Jan 13.

PMID:
29339148
16.

BolA Is Required for the Accurate Regulation of c-di-GMP, a Central Player in Biofilm Formation.

Moreira RN, Dressaire C, Barahona S, Galego L, Kaever V, Jenal U, Arraiano CM.

MBio. 2017 Sep 19;8(5). pii: e00443-17. doi: 10.1128/mBio.00443-17.

17.

The Role of Ribonucleases and sRNAs in the Virulence of Foodborne Pathogens.

Matos RG, Casinhas J, Bárria C, Dos Santos RF, Silva IJ, Arraiano CM.

Front Microbiol. 2017 May 19;8:910. doi: 10.3389/fmicb.2017.00910. eCollection 2017. Review.

18.

Sinorhizobium meliloti YbeY is an endoribonuclease with unprecedented catalytic features, acting as silencing enzyme in riboregulation.

Saramago M, Peregrina A, Robledo M, Matos RG, Hilker R, Serrania J, Becker A, Arraiano CM, Jiménez-Zurdo JI.

Nucleic Acids Res. 2017 Feb 17;45(3):1371-1391. doi: 10.1093/nar/gkw1234.

19.

Nitrogen balancing and xylose addition enhances growth capacity and protein content in Chlorella minutissima cultures.

Freitas BC, Esquível MG, Matos RG, Arraiano CM, Morais MG, Costa JA.

Bioresour Technol. 2016 Oct;218:129-33. doi: 10.1016/j.biortech.2016.06.059. Epub 2016 Jun 18.

20.

Correction: Modulating the RNA Processing and Decay by the Exosome: Altering Rrp44/Dis3 Activity and End-Product.

Reis FP, Barbas A, Klauer-King AA, Tsanova B, Schaeffer D, López-Viñas E, Gómez-Puertas P, van Hoof A, Arraiano CM.

PLoS One. 2015 Aug 21;10(8):e0136810. doi: 10.1371/journal.pone.0136810. eCollection 2015. No abstract available.

21.

Surprises in the 3'-end: 'U' can decide too!

Viegas SC, Silva IJ, Apura P, Matos RG, Arraiano CM.

FEBS J. 2015 Sep;282(18):3489-99. doi: 10.1111/febs.13377. Epub 2015 Aug 4. Review.

22.

The 3'-5' exoribonuclease Dis3 regulates the expression of specific microRNAs in Drosophila wing imaginal discs.

Towler BP, Jones CI, Viegas SC, Apura P, Waldron JA, Smalley SK, Arraiano CM, Newbury SF.

RNA Biol. 2015;12(7):728-41. doi: 10.1080/15476286.2015.1040978.

24.

BolA is a transcriptional switch that turns off motility and turns on biofilm development.

Dressaire C, Moreira RN, Barahona S, Alves de Matos AP, Arraiano CM.

MBio. 2015 Feb 17;6(1):e02352-14. doi: 10.1128/mBio.02352-14.

25.

The role of RNase R in trans-translation and ribosomal quality control.

Domingues S, Moreira RN, Andrade JM, Dos Santos RF, Bárria C, Viegas SC, Arraiano CM.

Biochimie. 2015 Jul;114:113-8. doi: 10.1016/j.biochi.2014.12.012. Epub 2014 Dec 24. Review.

PMID:
25542646
26.

Ribonucleases, antisense RNAs and the control of bacterial plasmids.

Saramago M, Bárria C, Arraiano CM, Domingues S.

Plasmid. 2015 Mar;78:26-36. doi: 10.1016/j.plasmid.2014.09.003. Epub 2014 Sep 28. Review.

PMID:
25263573
27.

The RNase R from Campylobacter jejuni has unique features and is involved in the first steps of infection.

Haddad N, Matos RG, Pinto T, Rannou P, Cappelier JM, Prévost H, Arraiano CM.

J Biol Chem. 2014 Oct 3;289(40):27814-24. doi: 10.1074/jbc.M114.561795. Epub 2014 Aug 6.

28.

Breaking through the stress barrier: the role of BolA in Gram-negative survival.

Guinote IB, Moreira RN, Barahona S, Freire P, Vicente M, Arraiano CM.

World J Microbiol Biotechnol. 2014 Oct;30(10):2559-66. doi: 10.1007/s11274-014-1702-4. Epub 2014 Jul 20. Review.

PMID:
25038865
29.

The importance of proteins of the RNase II/RNB-family in pathogenic bacteria.

Matos RG, Bárria C, Moreira RN, Barahona S, Domingues S, Arraiano CM.

Front Cell Infect Microbiol. 2014 Jun 3;4:68. doi: 10.3389/fcimb.2014.00068. eCollection 2014. Review. No abstract available.

30.

The role of RNases in the regulation of small RNAs.

Saramago M, Bárria C, Dos Santos RF, Silva IJ, Pobre V, Domingues S, Andrade JM, Viegas SC, Arraiano CM.

Curr Opin Microbiol. 2014 Apr;18:105-15. doi: 10.1016/j.mib.2014.02.009. Epub 2014 Apr 3. Review.

PMID:
24704578
31.

Editorial overview: cell regulation: microbial cell regulation-looking in from the outside.

Arraiano CM, Cook GM.

Curr Opin Microbiol. 2014 Apr;18:v-vii. doi: 10.1016/j.mib.2014.03.001. Epub 2014 Apr 2. No abstract available.

PMID:
24704057
32.

Characterization of the RNase R association with ribosomes.

Malecki M, Bárria C, Arraiano CM.

BMC Microbiol. 2014 Feb 11;14:34. doi: 10.1186/1471-2180-14-34.

33.

A PNPase dependent CRISPR System in Listeria.

Sesto N, Touchon M, Andrade JM, Kondo J, Rocha EP, Arraiano CM, Archambaud C, Westhof É, Romby P, Cossart P.

PLoS Genet. 2014 Jan;10(1):e1004065. doi: 10.1371/journal.pgen.1004065. Epub 2014 Jan 9.

34.

Base pairing interaction between 5'- and 3'-UTRs controls icaR mRNA translation in Staphylococcus aureus.

Ruiz de los Mozos I, Vergara-Irigaray M, Segura V, Villanueva M, Bitarte N, Saramago M, Domingues S, Arraiano CM, Fechter P, Romby P, Valle J, Solano C, Lasa I, Toledo-Arana A.

PLoS Genet. 2013;9(12):e1004001. doi: 10.1371/journal.pgen.1004001. Epub 2013 Dec 19.

35.

Two residues in the basic region of the yeast transcription factor Yap8 are crucial for its DNA-binding specificity.

Amaral C, Pimentel C, Matos RG, Arraiano CM, Matzapetakis M, Rodrigues-Pousada C.

PLoS One. 2013 Dec 16;8(12):e83328. doi: 10.1371/journal.pone.0083328. eCollection 2013.

36.

Modulating the RNA processing and decay by the exosome: altering Rrp44/Dis3 activity and end-product.

Reis FP, Barbas A, Klauer-King AA, Tsanova B, Schaeffer D, López-Viñas E, Gómez-Puertas P, van Hoof A, Arraiano CM.

PLoS One. 2013 Nov 12;8(11):e76504. doi: 10.1371/journal.pone.0076504. eCollection 2013. Erratum in: PLoS One. 2015;10(8):e0136810.

37.

Biofilm formation and antibiotic resistance in Salmonella Typhimurium are affected by different ribonucleases.

Saramago M, Domingues S, Viegas SC, Arraiano CM.

J Microbiol Biotechnol. 2014 Jan;24(1):8-12.

38.

Characterization of the biochemical properties of Campylobacter jejuni RNase III.

Haddad N, Saramago M, Matos RG, Prévost H, Arraiano CM.

Biosci Rep. 2013 Nov 25;33(6). pii: e00082. doi: 10.1042/BSR20130090.

39.

Bacterial adaptation to cold.

Barria C, Malecki M, Arraiano CM.

Microbiology. 2013 Dec;159(Pt 12):2437-43. doi: 10.1099/mic.0.052209-0. Epub 2013 Sep 25. Review.

PMID:
24068238
40.

The virulence of Salmonella enterica Serovar Typhimurium in the insect model galleria mellonella is impaired by mutations in RNase E and RNase III.

Viegas SC, Mil-Homens D, Fialho AM, Arraiano CM.

Appl Environ Microbiol. 2013 Oct;79(19):6124-33. doi: 10.1128/AEM.02044-13. Epub 2013 Aug 2.

41.

The bacterial protein azurin impairs invasion and FAK/Src signaling in P-cadherin-overexpressing breast cancer cell models.

Bernardes N, Ribeiro AS, Abreu S, Mota B, Matos RG, Arraiano CM, Seruca R, Paredes J, Fialho AM.

PLoS One. 2013 Jul 19;8(7):e69023. doi: 10.1371/journal.pone.0069023. Print 2013.

42.

An RpoS-dependent sRNA regulates the expression of a chaperone involved in protein folding.

Silva IJ, Ortega AD, Viegas SC, García-Del Portillo F, Arraiano CM.

RNA. 2013 Sep;19(9):1253-65. doi: 10.1261/rna.039537.113. Epub 2013 Jul 26.

43.

SATP (YaaH), a succinate-acetate transporter protein in Escherichia coli.

Sá-Pessoa J, Paiva S, Ribas D, Silva IJ, Viegas SC, Arraiano CM, Casal M.

Biochem J. 2013 Sep 15;454(3):585-95. doi: 10.1042/BJ20130412.

PMID:
23844911
44.

The RNase II/RNB family of exoribonucleases: putting the 'Dis' in disease.

Reis FP, Pobre V, Silva IJ, Malecki M, Arraiano CM.

Wiley Interdiscip Rev RNA. 2013 Sep-Oct;4(5):607-15. doi: 10.1002/wrna.1180. Epub 2013 Jun 14. Review.

PMID:
23776156
45.

A new tool for cloning and gene expression in Streptococcus pneumoniae.

Domingues S, Aires AC, Mohedano ML, López P, Arraiano CM.

Plasmid. 2013 Sep;70(2):247-53. doi: 10.1016/j.plasmid.2013.05.005. Epub 2013 May 22.

PMID:
23707902
46.

Intracellular ribonucleases involved in transcript processing and decay: precision tools for RNA.

Arraiano CM, Mauxion F, Viegas SC, Matos RG, Séraphin B.

Biochim Biophys Acta. 2013 Jun-Jul;1829(6-7):491-513. doi: 10.1016/j.bbagrm.2013.03.009. Epub 2013 Mar 29. Review.

PMID:
23545199
47.

The exoribonuclease Dis3L2 defines a novel eukaryotic RNA degradation pathway.

Malecki M, Viegas SC, Carneiro T, Golik P, Dressaire C, Ferreira MG, Arraiano CM.

EMBO J. 2013 Jul 3;32(13):1842-54. doi: 10.1038/emboj.2013.63. Epub 2013 Mar 15.

48.

Small RNA modules confer different stabilities and interact differently with multiple targets.

Andrade JM, Pobre V, Arraiano CM.

PLoS One. 2013;8(1):e52866. doi: 10.1371/journal.pone.0052866. Epub 2013 Jan 22. Erratum in: PLoS One. 2014;9(7):e102277.

49.

A BolA-like morphogene from the alga Chlamydomonas reinhardtii changes morphology and induces biofilm formation in Escherichia coli.

Khona DK, Dongre SS, Arraiano CM, D'Souza JS.

FEMS Microbiol Lett. 2013 Feb;339(1):39-47. doi: 10.1111/1574-6968.12051. Epub 2012 Dec 20.

50.

Synergies between RNA degradation and trans-translation in Streptococcus pneumoniae: cross regulation and co-transcription of RNase R and SmpB.

Moreira RN, Domingues S, Viegas SC, Amblar M, Arraiano CM.

BMC Microbiol. 2012 Nov 20;12:268. doi: 10.1186/1471-2180-12-268.

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