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Items: 1 to 50 of 154

1.

Complete Genome Sequence of Luteibacter pinisoli MAH-14.

Baltrus DA, Clark M, Inderbitzin P, Pignatta D, Knight-Connoni V, Arnold AE.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00774-19. doi: 10.1128/MRA.00774-19.

2.

T-BAS Version 2.1: Tree-Based Alignment Selector Toolkit for Evolutionary Placement of DNA Sequences and Viewing Alignments and Specimen Metadata on Curated and Custom Trees.

Carbone I, White JB, Miadlikowska J, Arnold AE, Miller MA, Magain N, U'Ren JM, Lutzoni F.

Microbiol Resour Announc. 2019 Jul 18;8(29). pii: e00328-19. doi: 10.1128/MRA.00328-19.

3.

Effect of Sugar 2',4'-Modifications on Gene Silencing Activity of siRNA Duplexes.

Malek-Adamian E, Fakhoury J, Arnold AE, Martínez-Montero S, Shoichet MS, Damha MJ.

Nucleic Acid Ther. 2019 Aug;29(4):187-194. doi: 10.1089/nat.2019.0792. Epub 2019 May 14.

4.

Resolving structure and function of metaorganisms through a holistic framework combining reductionist and integrative approaches.

Jaspers C, Fraune S, Arnold AE, Miller DJ, Bosch TCG, Voolstra CR; Consortium of Australian Academy of Science Boden Research Conference Participants.

Zoology (Jena). 2019 Apr;133:81-87. doi: 10.1016/j.zool.2019.02.007. Epub 2019 Mar 1. Review.

5.

Age-related variation in the oral microbiome of urban Cooper's hawks (Accipiter cooperii).

Taylor MJ, Mannan RW, U'Ren JM, Garber NP, Gallery RE, Arnold AE.

BMC Microbiol. 2019 Feb 21;19(1):47. doi: 10.1186/s12866-019-1413-y.

6.

Contemporaneous radiations of fungi and plants linked to symbiosis.

Lutzoni F, Nowak MD, Alfaro ME, Reeb V, Miadlikowska J, Krug M, Arnold AE, Lewis LA, Swofford DL, Hibbett D, Hilu K, James TY, Quandt D, Magallón S.

Nat Commun. 2018 Dec 21;9(1):5451. doi: 10.1038/s41467-018-07849-9.

7.

A novel proof of concept for capturing the diversity of endophytic fungi preserved in herbarium specimens.

Daru BH, Bowman EA, Pfister DH, Arnold AE.

Philos Trans R Soc Lond B Biol Sci. 2018 Nov 19;374(1763). pii: 20170395. doi: 10.1098/rstb.2017.0395.

PMID:
30455213
8.

Quantifying Re-association of a Facultative Endohyphal Bacterium with a Filamentous Fungus.

Baltrus DA, Spraker J, Arnold AE.

Methods Mol Biol. 2018;1848:1-11. doi: 10.1007/978-1-4939-8724-5_1.

PMID:
30182224
9.

Dynamic Neural Network Reconfiguration During the Generation and Reinstatement of Mnemonic Representations.

Arnold AEGF, Ekstrom AD, Iaria G.

Front Hum Neurosci. 2018 Jul 20;12:292. doi: 10.3389/fnhum.2018.00292. eCollection 2018.

10.

Dormancy-defense syndromes and tradeoffs between physical and chemical defenses in seeds of pioneer species.

Zalamea PC, Dalling JW, Sarmiento C, Arnold AE, Delevich C, Berhow MA, Ndobegang A, Gripenberg S, Davis AS.

Ecology. 2018 Sep;99(9):1988-1998. doi: 10.1002/ecy.2419. Epub 2018 Aug 3.

PMID:
30074614
11.

Using collections data to infer biogeographic, environmental, and host structure in communities of endophytic fungi.

Huang YL, Bowman EA, Massimo NC, Garber NP, U'Ren JM, Sandberg DC, Arnold AE.

Mycologia. 2018 Jan-Feb;110(1):47-62. doi: 10.1080/00275514.2018.1442078.

PMID:
29863996
12.

Antibody-Antisense Oligonucleotide Conjugate Downregulates a Key Gene in Glioblastoma Stem Cells.

Arnold AE, Malek-Adamian E, Le PU, Meng A, Martínez-Montero S, Petrecca K, Damha MJ, Shoichet MS.

Mol Ther Nucleic Acids. 2018 Jun 1;11:518-527. doi: 10.1016/j.omtn.2018.04.004. Epub 2018 Apr 19.

13.
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15.

RNA-based analyses reveal fungal communities structured by a senescence gradient in the moss Dicranum scoparium and the presence of putative multi-trophic fungi.

Chen KH, Liao HL, Arnold AE, Bonito G, Lutzoni F.

New Phytol. 2018 Jun;218(4):1597-1611. doi: 10.1111/nph.15092. Epub 2018 Mar 31.

16.

Quantifying beetle-macrofungal associations in a temperate biodiversity hot spot.

Epps MJ, Arnold AE.

Mycologia. 2018 Mar-Apr;110(2):269-285. doi: 10.1080/00275514.2018.1430439. Epub 2018 Mar 26.

PMID:
29580158
17.

Molecular lemmings: strategies to avoid when designing BODIPY ferrocene dyads for dye-sensitized solar cell applications.

Hussein BA, Huynh JT, Prieto PL, Barran CP, Arnold AE, Sarycheva OV, Lough AJ, Koivisto BD.

Dalton Trans. 2018 Apr 3;47(14):4916-4920. doi: 10.1039/C8DT00174J.

PMID:
29546908
18.

What Is Your Diagnosis?

Rodgers KC, Arnold AE, Newhard DK, Cline K, Winter RL.

J Am Vet Med Assoc. 2018 Mar 15;252(6):649-652. doi: 10.2460/javma.252.6.649. No abstract available.

PMID:
29504862
19.

Cytotoxic and Noncytotoxic Metabolites from Teratosphaeria sp. FL2137, a Fungus Associated with Pinus clausa.

Padumadasa C, Xu YM, Wijeratne EMK, Espinosa-Artiles P, U'Ren JM, Arnold AE, Gunatilaka AAL.

J Nat Prod. 2018 Mar 23;81(3):616-624. doi: 10.1021/acs.jnatprod.7b00838. Epub 2018 Jan 26.

PMID:
29373790
20.

Soilborne fungi have host affinity and host-specific effects on seed germination and survival in a lowland tropical forest.

Sarmiento C, Zalamea PC, Dalling JW, Davis AS, Stump SM, U'Ren JM, Arnold AE.

Proc Natl Acad Sci U S A. 2017 Oct 24;114(43):11458-11463. doi: 10.1073/pnas.1706324114. Epub 2017 Oct 2.

21.

Bacterial Endosymbionts: Master Modulators of Fungal Phenotypes.

Araldi-Brondolo SJ, Spraker J, Shaffer JP, Woytenko EH, Baltrus DA, Gallery RE, Arnold AE.

Microbiol Spectr. 2017 Sep;5(5). doi: 10.1128/microbiolspec.FUNK-0056-2016. Review.

PMID:
28936944
22.

Bifiguratus adelaidae, gen. et sp. nov., a new member of Mucoromycotina in endophytic and soil-dwelling habitats.

Torres-Cruz TJ, Billingsley Tobias TL, Almatruk M, Hesse CN, Kuske CR, Desirò A, Benucci GMN, Bonito G, Stajich JE, Dunlap C, Arnold AE, Porras-Alfaro A.

Mycologia. 2017 May-Jun;109(3):363-378. doi: 10.1080/00275514.2017.1364958. Epub 2017 Aug 8.

23.

An Endohyphal Bacterium (Chitinophaga, Bacteroidetes) Alters Carbon Source Use by Fusarium keratoplasticum (F. solani Species Complex, Nectriaceae).

Shaffer JP, U'Ren JM, Gallery RE, Baltrus DA, Arnold AE.

Front Microbiol. 2017 Mar 14;8:350. doi: 10.3389/fmicb.2017.00350. eCollection 2017.

24.

Absence of genome reduction in diverse, facultative endohyphal bacteria.

Baltrus DA, Dougherty K, Arendt KR, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Arnold AE.

Microb Genom. 2017 Feb 28;3(2):e000101. doi: 10.1099/mgen.0.000101. eCollection 2017 Feb.

25.

Engineered polymeric nanoparticles to guide the cellular internalization and trafficking of small interfering ribonucleic acids.

Arnold AE, Czupiel P, Shoichet M.

J Control Release. 2017 Aug 10;259:3-15. doi: 10.1016/j.jconrel.2017.02.019. Epub 2017 Feb 21. Review.

PMID:
28232223
26.

An epigenetic modifier induces production of (10'S)-verruculide B, an inhibitor of protein tyrosine phosphatases by Phoma sp. nov. LG0217, a fungal endophyte of Parkinsonia microphylla.

Gubiani JR, Wijeratne EM, Shi T, Araujo AR, Arnold AE, Chapman E, Gunatilaka AA.

Bioorg Med Chem. 2017 Mar 15;25(6):1860-1866. doi: 10.1016/j.bmc.2017.01.048. Epub 2017 Feb 3.

27.

Chlorinated Dehydrocurvularins and Alterperylenepoxide A from Alternaria sp. AST0039, a Fungal Endophyte of Astragalus lentiginosus.

Bashyal BP, Wijeratne EM, Tillotson J, Arnold AE, Chapman E, Gunatilaka AA.

J Nat Prod. 2017 Feb 24;80(2):427-433. doi: 10.1021/acs.jnatprod.6b00960. Epub 2017 Jan 31.

28.

Montagnuphilones A-G, Azaphilones from Montagnulaceae sp. DM0194, a Fungal Endophyte of Submerged Roots of Persicaria amphibia.

Luo JG, Xu YM, Sandberg DC, Arnold AE, Gunatilaka AA.

J Nat Prod. 2017 Jan 27;80(1):76-81. doi: 10.1021/acs.jnatprod.6b00714. Epub 2017 Jan 18.

PMID:
28099011
29.

T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: an example with the Pezizomycotina tree of life.

Carbone I, White JB, Miadlikowska J, Arnold AE, Miller MA, Kauff F, U'Ren JM, May G, Lutzoni F.

Bioinformatics. 2017 Apr 15;33(8):1160-1168. doi: 10.1093/bioinformatics/btw808.

PMID:
28003260
31.

Mental simulation of routes during navigation involves adaptive temporal compression.

Arnold AEGF, Iaria G, Ekstrom AD.

Cognition. 2016 Dec;157:14-23. doi: 10.1016/j.cognition.2016.08.009. Epub 2016 Aug 29.

32.

The Relationship Between Job Satisfaction and Productivity-Related Costs: A Longitudinal Analysis.

Arnold AE, Coffeng JK, Boot CR, van der Beek AJ, van Tulder MW, Nieboer D, van Dongen JM.

J Occup Environ Med. 2016 Sep;58(9):874-9. doi: 10.1097/JOM.0000000000000831.

PMID:
27454400
33.

Erratum to: Interaction type influences ecological network structure more than local abiotic conditions: evidence from endophytic and endolichenic fungi at a continental scale.

Chagnon PL, U'Ren JM, Miadlikowska J, Lutzoni F, Arnold AE.

Oecologia. 2016 Jun;181(2):633. No abstract available.

PMID:
27106850
34.

OPHIDIOMYCES OPHIODIICOLA ON A CAPTIVE BLACK RACER (COLUBER CONSTRICTOR) AND A GARTER SNAKE (THAMNOPHIS SIRTALIS) IN PENNSYLVANIA.

Ohkura M, Worley JJ, Hughes-Hallett JE, Fisher JS, Love BC, Arnold AE, Orbach MJ.

J Zoo Wildl Med. 2016 Mar;47(1):341-6. doi: 10.1638/2015-0123.1.

PMID:
27010299
35.

Chemical constituents and their antibacterial activity from the tropical endophytic fungus Diaporthe sp. F2934.

Sousa JP, Aguilar-Pérez MM, Arnold AE, Rios N, Coley PD, Kursar TA, Cubilla-Rios L.

J Appl Microbiol. 2016 Jun;120(6):1501-8. doi: 10.1111/jam.13132. Epub 2016 Apr 25.

36.

Isolation of Endohyphal Bacteria from Foliar Ascomycota and In Vitro Establishment of Their Symbiotic Associations.

Arendt KR, Hockett KL, Araldi-Brondolo SJ, Baltrus DA, Arnold AE.

Appl Environ Microbiol. 2016 May 2;82(10):2943-2949. doi: 10.1128/AEM.00452-16. Print 2016 May 15.

37.

Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota).

U'Ren JM, Miadlikowska J, Zimmerman NB, Lutzoni F, Stajich JE, Arnold AE.

Mol Phylogenet Evol. 2016 May;98:210-32. doi: 10.1016/j.ympev.2016.02.010. Epub 2016 Feb 20.

PMID:
26903035
38.

Oxaspirol B with p97 Inhibitory Activity and Other Oxaspirols from Lecythophora sp. FL1375 and FL1031, Endolichenic Fungi Inhabiting Parmotrema tinctorum and Cladonia evansii.

Wijeratne EM, Gunaherath GM, Chapla VM, Tillotson J, de la Cruz F, Kang M, U'Ren JM, Araujo AR, Arnold AE, Chapman E, Gunatilaka AA.

J Nat Prod. 2016 Feb 26;79(2):340-52. doi: 10.1021/acs.jnatprod.5b00986. Epub 2016 Jan 26.

39.

Efficacy of identifying neural components in the face and emotion processing system in schizophrenia using a dynamic functional localizer.

Arnold AE, Iaria G, Goghari VM.

Psychiatry Res Neuroimaging. 2016 Feb 28;248:55-63. doi: 10.1016/j.pscychresns.2016.01.007. Epub 2016 Jan 4.

PMID:
26792586
40.

Cytotoxic Cytochalasins and Other Metabolites from Xylariaceae sp. FL0390, a Fungal Endophyte of Spanish Moss.

Xu YM, Bashyal BP, Liu MX, Espinosa-Artiles P, U'Ren JM, Arnold AE, Gunatilaka AA.

Nat Prod Commun. 2015 Oct;10(10):1655-8.

PMID:
26669096
41.

Anteaglonialides A-F and Palmarumycins CE(1)-CE(3) from Anteaglonium sp. FL0768, a Fungal Endophyte of the Spikemoss Selaginella arenicola.

Xu YM, Mafezoli J, Oliveira MC, U'Ren JM, Arnold AE, Gunatilaka AA.

J Nat Prod. 2015 Nov 25;78(11):2738-47. doi: 10.1021/acs.jnatprod.5b00717. Epub 2015 Nov 5.

PMID:
26539727
42.

Interaction type influences ecological network structure more than local abiotic conditions: evidence from endophytic and endolichenic fungi at a continental scale.

Chagnon PL, U'Ren JM, Miadlikowska J, Lutzoni F, Arnold AE.

Oecologia. 2016 Jan;180(1):181-91. doi: 10.1007/s00442-015-3457-5. Epub 2015 Sep 29. Erratum in: Oecologia. 2016 Jun;181(2):633.

PMID:
26420599
43.

Pervasive Effects of Wildfire on Foliar Endophyte Communities in Montane Forest Trees.

Huang YL, Devan MM, U'Ren JM, Furr SH, Arnold AE.

Microb Ecol. 2016 Feb;71(2):452-68. doi: 10.1007/s00248-015-0664-x. Epub 2015 Sep 14.

44.

Sesquiterpenes and other constituents of Xylaria sp. NC1214, a fungal endophyte of the moss Hypnum sp.

Wei H, Xu YM, Espinosa-Artiles P, Liu MX, Luo JG, U'Ren JM, Arnold AE, Gunatilaka AA.

Phytochemistry. 2015 Oct;118:102-8. doi: 10.1016/j.phytochem.2015.08.010. Epub 2015 Aug 28.

45.

Functional activation abnormalities during facial emotion perception in schizophrenia patients and nonpsychotic relatives.

Spilka MJ, Arnold AE, Goghari VM.

Schizophr Res. 2015 Oct;168(1-2):330-7. doi: 10.1016/j.schres.2015.07.012. Epub 2015 Jul 16.

PMID:
26189076
46.

Metatranscriptome Analysis of Fig Flowers Provides Insights into Potential Mechanisms for Mutualism Stability and Gall Induction.

Martinson EO, Hackett JD, Machado CA, Arnold AE.

PLoS One. 2015 Jun 19;10(6):e0130745. doi: 10.1371/journal.pone.0130745. eCollection 2015.

47.

Variation in ectomycorrhizal fungal communities associated with Oreomunnea mexicana (Juglandaceae) in a Neotropical montane forest.

Corrales A, Arnold AE, Ferrer A, Turner BL, Dalling JW.

Mycorrhiza. 2016 Jan;26(1):1-17. doi: 10.1007/s00572-015-0641-8. Epub 2015 May 5.

PMID:
25940407
48.
49.

Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order - Phaeomoniellales.

Chen KH, Miadlikowska J, Molnár K, Arnold AE, U'Ren JM, Gaya E, Gueidan C, Lutzoni F.

Mol Phylogenet Evol. 2015 Apr;85:117-30. doi: 10.1016/j.ympev.2015.01.008. Epub 2015 Feb 17.

PMID:
25701073
50.

Fungal endophytes in aboveground tissues of desert plants: infrequent in culture, but highly diverse and distinctive symbionts.

Massimo NC, Nandi Devan MM, Arendt KR, Wilch MH, Riddle JM, Furr SH, Steen C, U'Ren JM, Sandberg DC, Arnold AE.

Microb Ecol. 2015 Jul;70(1):61-76. doi: 10.1007/s00248-014-0563-6. Epub 2015 Feb 3.

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