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Characteristics Associated with a History of Physical and Sexual Abuse in a Community Corrections Sample.

Clark CB, Reiland SA, Armstrong JD, Ewy R, Cropsey KL.

Subst Use Misuse. 2019 Nov 14:1-7. doi: 10.1080/10826084.2019.1686023. [Epub ahead of print]


Dissecting the Shared and Context-Dependent Pathways Mediated by the p140Cap Adaptor Protein in Cancer and in Neurons.

Chapelle J, Sorokina O, McLean C, Salemme V, Alfieri A, Angelini C, Morellato A, Adrait A, Menna E, Matteoli M, Couté Y, Ala U, Turco E, Defilippi P, Armstrong JD.

Front Cell Dev Biol. 2019 Oct 15;7:222. doi: 10.3389/fcell.2019.00222. eCollection 2019.


Studies on long term behavioural changes in group-housed rat models of brain and spinal cord injury using an automated home cage recording system.

Yip PK, Chapman GE, Sillito RR, Ip THR, Akhigbe G, Becker SC, Price AW, Michael-Titus AT, Armstrong JD, Tremoleda JL.

J Neurosci Methods. 2019 Jun 1;321:49-63. doi: 10.1016/j.jneumeth.2019.04.005. Epub 2019 Apr 13.


Regeneration of Dopaminergic Neurons in Adult Zebrafish Depends on Immune System Activation and Differs for Distinct Populations.

Caldwell LJ, Davies NO, Cavone L, Mysiak KS, Semenova SA, Panula P, Armstrong JD, Becker CG, Becker T.

J Neurosci. 2019 Jun 12;39(24):4694-4713. doi: 10.1523/JNEUROSCI.2706-18.2019. Epub 2019 Apr 4.


Massive-Scale Binding Free Energy Simulations of HIV Integrase Complexes Using Asynchronous Replica Exchange Framework Implemented on the IBM WCG Distributed Network.

Xia J, Flynn W, Gallicchio E, Uplinger K, Armstrong JD, Forli S, Olson AJ, Levy RM.

J Chem Inf Model. 2019 Apr 22;59(4):1382-1397. doi: 10.1021/acs.jcim.8b00817. Epub 2019 Feb 22.


Regional Diversity in the Postsynaptic Proteome of the Mouse Brain.

Roy M, Sorokina O, McLean C, Tapia-González S, DeFelipe J, Armstrong JD, Grant SGN.

Proteomes. 2018 Aug 1;6(3). pii: E31. doi: 10.3390/proteomes6030031.


The Scottish invasion of pink salmon in 2017.

Armstrong JD, Bean CW, Wells A.

J Fish Biol. 2018 Jul;93(1):8-11. doi: 10.1111/jfb.13680. No abstract available.


Monitoring brain activity and behaviour in freely moving Drosophila larvae using bioluminescence.

Marescotti M, Lagogiannis K, Webb B, Davies RW, Armstrong JD.

Sci Rep. 2018 Jun 18;8(1):9246. doi: 10.1038/s41598-018-27043-7.


Telomere elongation during early development is independent of environmental temperatures in Atlantic salmon.

McLennan D, Armstrong JD, Stewart DC, Mckelvey S, Boner W, Monaghan P, Metcalfe NB.

J Exp Biol. 2018 Jun 4;221(Pt 11). pii: jeb178616. doi: 10.1242/jeb.178616.


Effective methodologies for enantiomeric separations of 150 pharmacology and toxicology related 1°, 2°, and 3° amines with core-shell chiral stationary phases.

Hellinghausen G, Roy D, Lee JT, Wang Y, Weatherly CA, Lopez DA, Nguyen KA, Armstrong JD, Armstrong DW.

J Pharm Biomed Anal. 2018 Jun 5;155:70-81. doi: 10.1016/j.jpba.2018.03.032. Epub 2018 Mar 21.


Rule-based modelling provides an extendable framework for comparing candidate mechanisms underpinning clathrin polymerisation.

Sorokin A, Heil KF, Armstrong JD, Sorokina O.

Sci Rep. 2018 Apr 4;8(1):5658. doi: 10.1038/s41598-018-23829-x.


Pharmacological validation of individual animal locomotion, temperature and behavioural analysis in group-housed rats using a novel automated home cage analysis system: A comparison with the modified Irwin test.

Tse K, Sillito R, Keerie A, Collier R, Grant C, Karp NA, Vickers C, Chapman K, Armstrong JD, Redfern WS.

J Pharmacol Toxicol Methods. 2018 Nov - Dec;94(Pt 1):1-13. doi: 10.1016/j.vascn.2018.03.008. Epub 2018 Apr 1.


Effects of individual variation in length, condition and run-time on return rates of wild-reared Atlantic salmon Salmo salar smolts.

Armstrong JD, McKelvey S, Smith GW, Rycroft P, Fryer RJ.

J Fish Biol. 2018 Mar;92(3):569-578. doi: 10.1111/jfb.13548. Erratum in: J Fish Biol. 2018 Jun;92(6):2050.


Fishes in a changing world: learning from the past to promote sustainability of fish populations.

Gordon TAC, Harding HR, Clever FK, Davidson IK, Davison W, Montgomery DW, Weatherhead RC, Windsor FM, Armstrong JD, Bardonnet A, Bergman E, Britton JR, Côté IM, D'agostino D, Greenberg LA, Harborne AR, Kahilainen KK, Metcalfe NB, Mills SC, Milner NJ, Mittermayer FH, Montorio L, Nedelec SL, Prokkola JM, Rutterford LA, Salvanes AGV, Simpson SD, Vainikka A, Pinnegar JK, Santos EM.

J Fish Biol. 2018 Mar;92(3):804-827. doi: 10.1111/jfb.13546.


Is bigger really better? Towards improved models for testing how Atlantic salmon Salmo salar smolt size affects marine survival.

Gregory SD, Armstrong JD, Britton JR.

J Fish Biol. 2018 Mar;92(3):579-592. doi: 10.1111/jfb.13550.


Links between parental life histories of wild salmon and the telomere lengths of their offspring.

McLennan D, Armstrong JD, Stewart DC, McKelvey S, Boner W, Monaghan P, Metcalfe NB.

Mol Ecol. 2018 Feb;27(3):804-814. doi: 10.1111/mec.14467. Epub 2018 Jan 31.


Nutrients from salmon parents alter selection pressures on their offspring.

Auer SK, Anderson GJ, McKelvey S, Bassar RD, McLennan D, Armstrong JD, Nislow KH, Downie HK, McKelvey L, Morgan TAJ, Salin K, Orrell DL, Gauthey A, Reid TC, Metcalfe NB.

Ecol Lett. 2018 Feb;21(2):287-295. doi: 10.1111/ele.12894. Epub 2017 Dec 15.


Proteomic analysis of postsynaptic proteins in regions of the human neocortex.

Roy M, Sorokina O, Skene N, Simonnet C, Mazzo F, Zwart R, Sher E, Smith C, Armstrong JD, Grant SGN.

Nat Neurosci. 2018 Jan;21(1):130-138. doi: 10.1038/s41593-017-0025-9. Epub 2017 Dec 4.


Arc Requires PSD95 for Assembly into Postsynaptic Complexes Involved with Neural Dysfunction and Intelligence.

Fernández E, Collins MO, Frank RAW, Zhu F, Kopanitsa MV, Nithianantharajah J, Lemprière SA, Fricker D, Elsegood KA, McLaughlin CL, Croning MDR, Mclean C, Armstrong JD, Hill WD, Deary IJ, Cencelli G, Bagni C, Fromer M, Purcell SM, Pocklington AJ, Choudhary JS, Komiyama NH, Grant SGN.

Cell Rep. 2017 Oct 17;21(3):679-691. doi: 10.1016/j.celrep.2017.09.045.


Automated recording of home cage activity and temperature of individual rats housed in social groups: The Rodent Big Brother project.

Redfern WS, Tse K, Grant C, Keerie A, Simpson DJ, Pedersen JC, Rimmer V, Leslie L, Klein SK, Karp NA, Sillito R, Chartsias A, Lukins T, Heward J, Vickers C, Chapman K, Armstrong JD.

PLoS One. 2017 Sep 6;12(9):e0181068. doi: 10.1371/journal.pone.0181068. eCollection 2017.


Synaptic Interactome Mining Reveals p140Cap as a New Hub for PSD Proteins Involved in Psychiatric and Neurological Disorders.

Alfieri A, Sorokina O, Adrait A, Angelini C, Russo I, Morellato A, Matteoli M, Menna E, Boeri Erba E, McLean C, Armstrong JD, Ala U, Buxbaum JD, Brusco A, Couté Y, De Rubeis S, Turco E, Defilippi P.

Front Mol Neurosci. 2017 Jun 30;10:212. doi: 10.3389/fnmol.2017.00212. eCollection 2017.


Assessing mouse behaviour throughout the light/dark cycle using automated in-cage analysis tools.

Bains RS, Wells S, Sillito RR, Armstrong JD, Cater HL, Banks G, Nolan PM.

J Neurosci Methods. 2018 Apr 15;300:37-47. doi: 10.1016/j.jneumeth.2017.04.014. Epub 2017 Apr 26.


Interactions between parental traits, environmental harshness and growth rate in determining telomere length in wild juvenile salmon.

McLennan D, Armstrong JD, Stewart DC, Mckelvey S, Boner W, Monaghan P, Metcalfe NB.

Mol Ecol. 2016 Nov;25(21):5425-5438. doi: 10.1111/mec.13857. Epub 2016 Oct 14.


Maternal age at maturation underpins contrasting behavior in offspring.

Burton T, Robertsen G, Stewart DC, McKelvey S, Armstrong JD, Metcalfe NB.

Behav Ecol. 2016 Sep-Oct;27(5):1280-1287. Epub 2016 May 10.


Analysis of Individual Mouse Activity in Group Housed Animals of Different Inbred Strains using a Novel Automated Home Cage Analysis System.

Bains RS, Cater HL, Sillito RR, Chartsias A, Sneddon D, Concas D, Keskivali-Bond P, Lukins TC, Wells S, Acevedo Arozena A, Nolan PM, Armstrong JD.

Front Behav Neurosci. 2016 Jun 10;10:106. doi: 10.3389/fnbeh.2016.00106. eCollection 2016.


Functional characterisation of human synaptic genes expressed in the Drosophila brain.

Zografos L, Tang J, Hesse F, Wanker EE, Li KW, Smit AB, Davies RW, Armstrong JD.

Biol Open. 2016 May 15;5(5):662-7. doi: 10.1242/bio.016261.


Fluid consumption and taste novelty determines transcription temporal dynamics in the gustatory cortex.

Inberg S, Jacob E, Elkobi A, Edry E, Rappaport A, Simpson TI, Armstrong JD, Shomron N, Pasmanik-Chor M, Rosenblum K.

Mol Brain. 2016 Feb 9;9:13. doi: 10.1186/s13041-016-0188-4.


MEK Inhibitors Reverse cAMP-Mediated Anxiety in Zebrafish.

Lundegaard PR, Anastasaki C, Grant NJ, Sillito RR, Zich J, Zeng Z, Paranthaman K, Larsen AP, Armstrong JD, Porteous DJ, Patton EE.

Chem Biol. 2015 Oct 22;22(10):1335-46. doi: 10.1016/j.chembiol.2015.08.010. Epub 2015 Sep 17.


Piezo Is Essential for Amiloride-Sensitive Stretch-Activated Mechanotransduction in Larval Drosophila Dorsal Bipolar Dendritic Sensory Neurons.

Suslak TJ, Watson S, Thompson KJ, Shenton FC, Bewick GS, Armstrong JD, Jarman AP.

PLoS One. 2015 Jul 17;10(7):e0130969. doi: 10.1371/journal.pone.0130969. eCollection 2015.


Drosophila circadian rhythms in seminatural environments: Summer afternoon component is not an artifact and requires TrpA1 channels.

Green EW, O'Callaghan EK, Hansen CN, Bastianello S, Bhutani S, Vanin S, Armstrong JD, Costa R, Kyriacou CP.

Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8702-7. doi: 10.1073/pnas.1506093112. Epub 2015 Jun 29.


Ethical issues recognized by critical care nurses in the intensive care units of a tertiary hospital during two separate periods.

Park DW, Moon JY, Ku EY, Kim SJ, Koo YM, Kim OJ, Lee SH, Jo MW, Lim CM, Armstrong JD 2nd, Koh Y.

J Korean Med Sci. 2015 Apr;30(4):495-501. doi: 10.3346/jkms.2015.30.4.495. Epub 2015 Mar 19.


Dynamics of elongation factor 2 kinase regulation in cortical neurons in response to synaptic activity.

Kenney JW, Sorokina O, Genheden M, Sorokin A, Armstrong JD, Proud CG.

J Neurosci. 2015 Feb 18;35(7):3034-47. doi: 10.1523/JNEUROSCI.2866-14.2015.


Genetic analysis of Drosophila circadian behavior in seminatural conditions.

Green EW, O'Callaghan EK, Pegoraro M, Armstrong JD, Costa R, Kyriacou CP.

Methods Enzymol. 2015;551:121-33. doi: 10.1016/bs.mie.2014.10.001. Epub 2014 Nov 29. Review.


Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library.

Lowe N, Rees JS, Roote J, Ryder E, Armean IM, Johnson G, Drummond E, Spriggs H, Drummond J, Magbanua JP, Naylor H, Sanson B, Bastock R, Huelsmann S, Trovisco V, Landgraf M, Knowles-Barley S, Armstrong JD, White-Cooper H, Hansen C, Phillips RG; UK Drosophila Protein Trap Screening Consortium, Lilley KS, Russell S, St Johnston D.

Development. 2014 Oct;141(20):3994-4005. doi: 10.1242/dev.111054.


A systematic nomenclature for the insect brain.

Ito K, Shinomiya K, Ito M, Armstrong JD, Boyan G, Hartenstein V, Harzsch S, Heisenberg M, Homberg U, Jenett A, Keshishian H, Restifo LL, Rössler W, Simpson JH, Strausfeld NJ, Strauss R, Vosshall LB; Insect Brain Name Working Group.

Neuron. 2014 Feb 19;81(4):755-65. doi: 10.1016/j.neuron.2013.12.017.


NMDA receptor-dependent regulation of miRNA expression and association with Argonaute during LTP in vivo.

Pai B, Siripornmongcolchai T, Berentsen B, Pakzad A, Vieuille C, Pallesen S, Pajak M, Simpson TI, Armstrong JD, Wibrand K, Bramham CR.

Front Cell Neurosci. 2014 Jan 13;7:285. doi: 10.3389/fncel.2013.00285. eCollection 2014 Jan 13.


Spatial variation in the relationship between performance and metabolic rate in wild juvenile Atlantic salmon.

Robertsen G, Armstrong JD, Nislow KH, Herfindal I, McKelvey S, Einum S.

J Anim Ecol. 2014 Jul;83(4):791-9. doi: 10.1111/1365-2656.12182. Epub 2014 Jan 28.


Basin-scale phenology and effects of climate variability on global timing of initial seaward migration of Atlantic salmon (Salmo salar).

Otero J, L'Abée-Lund JH, Castro-Santos T, Leonardsson K, Storvik GO, Jonsson B, Dempson B, Russell IC, Jensen AJ, Baglinière JL, Dionne M, Armstrong JD, Romakkaniemi A, Letcher BH, Kocik JF, Erkinaro J, Poole R, Rogan G, Lundqvist H, Maclean JC, Jokikokko E, Arnekleiv JV, Kennedy RJ, Niemelä E, Caballero P, Music PA, Antonsson T, Gudjonsson S, Veselov AE, Lamberg A, Groom S, Taylor BH, Taberner M, Dillane M, Arnason F, Horton G, Hvidsten NA, Jonsson IR, Jonsson N, McKelvey S, Naesje TF, Skaala O, Smith GW, Saegrov H, Stenseth NC, Vøllestad LA.

Glob Chang Biol. 2014 Jan;20(1):61-75. doi: 10.1111/gcb.12363. Epub 2013 Nov 21.


Early maternal experience shapes offspring performance in the wild.

Burton T, McKelvey S, Stewart DC, Armstrong JD, Metcalfe NB.

Ecology. 2013 Mar;94(3):618-26.


Metabolic turnover of synaptic proteins: kinetics, interdependencies and implications for synaptic maintenance.

Cohen LD, Zuchman R, Sorokina O, Müller A, Dieterich DC, Armstrong JD, Ziv T, Ziv NE.

PLoS One. 2013 May 2;8(5):e63191. doi: 10.1371/journal.pone.0063191. Print 2013.


Among-sibling differences in the phenotypes of juvenile fish depend on their location within the egg mass and maternal dominance rank.

Burton T, Hoogenboom MO, Beevers ND, Armstrong JD, Metcalfe NB.

Proc Biol Sci. 2013 Jan 22;280(1751):20122441. doi: 10.1098/rspb.2012.2441.


SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations.

von Eichborn J, Dunkel M, Gohlke BO, Preissner SC, Hoffmann MF, Bauer JM, Armstrong JD, Schaefer MH, Andrade-Navarro MA, Le Novere N, Croning MD, Grant SG, van Nierop P, Smit AB, Preissner R.

Nucleic Acids Res. 2013 Jan;41(Database issue):D834-40. doi: 10.1093/nar/gks1040. Epub 2012 Nov 11.


Consolidation and translation regulation.

Gal-Ben-Ari S, Kenney JW, Ounalla-Saad H, Taha E, David O, Levitan D, Gildish I, Panja D, Pai B, Wibrand K, Simpson TI, Proud CG, Bramham CR, Armstrong JD, Rosenblum K.

Learn Mem. 2012 Aug 16;19(9):410-22. doi: 10.1101/lm.026849.112. Review.


Dysfunction of the diaphragm.

Armstrong JD 2nd.

N Engl J Med. 2012 May 24;366(21):2036; author reply 2037. doi: 10.1056/NEJMc1204076. No abstract available.


A strategy for building neuroanatomy ontologies.

Osumi-Sutherland D, Reeve S, Mungall CJ, Neuhaus F, Ruttenberg A, Jefferis GS, Armstrong JD.

Bioinformatics. 2012 May 1;28(9):1262-9. doi: 10.1093/bioinformatics/bts113. Epub 2012 Mar 7. Erratum in: Bioinformatics. 2012 Aug 1;28(15):2091.


The performance advantage of a high resting metabolic rate in juvenile salmon is habitat dependent.

Reid D, Armstrong JD, Metcalfe NB.

J Anim Ecol. 2012 Jul;81(4):868-75. doi: 10.1111/j.1365-2656.2012.01969.x. Epub 2012 Feb 23.


The Virtual Fly Brain browser and query interface.

Milyaev N, Osumi-Sutherland D, Reeve S, Burton N, Baldock RA, Armstrong JD.

Bioinformatics. 2012 Feb 1;28(3):411-5. doi: 10.1093/bioinformatics/btr677. Epub 2011 Dec 16.


Evolution of the cognitive proteome: from static to dynamic network models.

Armstrong JD, Sorokina O.

Adv Exp Med Biol. 2012;736:119-34. doi: 10.1007/978-1-4419-7210-1_6.


A general mathematical model of transduction events in mechano-sensory stretch receptors.

Suslak TJ, Armstrong JD, Jarman AP.

Network. 2011;22(1-4):133-42. doi: 10.3109/0954898X.2011.638967. Review.


What causes intraspecific variation in resting metabolic rate and what are its ecological consequences?

Burton T, Killen SS, Armstrong JD, Metcalfe NB.

Proc Biol Sci. 2011 Dec 7;278(1724):3465-73. doi: 10.1098/rspb.2011.1778. Epub 2011 Sep 28. Review.

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