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The Genome of C57BL/6J "Eve", the Mother of the Laboratory Mouse Genome Reference Strain.

Sarsani VK, Raghupathy N, Fiddes IT, Armstrong J, Thibaud-Nissen F, Zinder O, Bolisetty M, Howe K, Hinerfeld D, Ruan X, Rowe L, Barter M, Ananda G, Paten B, Weinstock GM, Churchill GA, Wiles MV, Schneider VA, Srivastava A, Reinholdt LG.

G3 (Bethesda). 2019 Apr 17. pii: g3.400071.2019. doi: 10.1534/g3.119.400071. [Epub ahead of print]


Studies on long term behavioural changes in group-housed rat models of brain and spinal cord injury using an automated home cage recording system.

Yip PK, Chapman GE, Sillito RR, Ip THR, Akhigbe G, Becker SC, Price AW, Michael-Titus AT, Armstrong JD, Tremoleda JL.

J Neurosci Methods. 2019 Apr 13. pii: S0165-0270(19)30116-5. doi: 10.1016/j.jneumeth.2019.04.005. [Epub ahead of print]


Fresh Approaches to Addressing High Drug Costs.

Armstrong J, Becker C.

NCSL Legisbrief. 2019 Apr;27(15):1-2. No abstract available.


Secondary surgical intervention after primary glaucoma filtration surgery: an Ontario population-based study.

Armstrong JJ, Welk BK, Reid JNS, Kansal V, Hutnik CML.

Can J Ophthalmol. 2019 Apr;54(2):212-222. doi: 10.1016/j.jcjo.2018.04.004. Epub 2018 Jun 20.


Categories of Resistance to Sugarcane Aphid (Hemiptera: Aphididae) Among Sorghum Genotypes.

Paudyal S, Armstrong JS, Giles KL, Payton ME, Opit GP, Limaje A.

J Econ Entomol. 2019 Apr 11. pii: toz077. doi: 10.1093/jee/toz077. [Epub ahead of print]


Increased HIV diagnoses in West Virginia counties highly vulnerable to rapid HIV dissemination through injection drug use: a cautionary tale.

Bradley H, Hogan V, Agnew-Brune C, Armstrong J, Broussard D, Buchacz K, Burton K, Cope S, Dawson E, De La Garza G, Gerard A, Granado M, Gupta R, Haddy L, Hoffman W, Johnson SD, Kirk N, Lee C, Lyss S, Mark-Carew M, Quilter L, Reynolds P, Rose B, Thompson A, Varella L, Weidle P, White B, Wills D, Young SA, Hoots BE.

Ann Epidemiol. 2019 Mar 6. pii: S1047-2797(19)30081-X. doi: 10.1016/j.annepidem.2019.02.012. [Epub ahead of print]


Mitochondrial Targeting of Antioxidants Alters Pancreatic Acinar Cell Bioenergetics and Determines Cell Fate.

Armstrong JA, Cash NJ, Morton JC, Tepikin AV, Sutton R, Criddle DN.

Int J Mol Sci. 2019 Apr 5;20(7). pii: E1700. doi: 10.3390/ijms20071700.


Regeneration of dopaminergic neurons in adult zebrafish depends on immune system activation and differs for distinct populations.

Caldwell LJ, Davies NO, Cavone L, Mysiak KS, Semenova SA, Panula P, Armstrong JD, Becker CG, Becker T.

J Neurosci. 2019 Apr 4. pii: 2706-18. doi: 10.1523/JNEUROSCI.2706-18.2019. [Epub ahead of print]


Abbreviated Development of the Brooding Brittle Star Ophioplocus esmarki.

Sweet HC, Doolin MC, Yanowiak CN, Coots AD, Freyn AW, Armstrong JM, Spiecker BJ.

Biol Bull. 2019 Apr;236(2):75-87. doi: 10.1086/701916. Epub 2019 Mar 12.


Differential effects of dexamethasone and indomethacin on Tenon's capsule fibroblasts: Implications for glaucoma surgery.

Armstrong JJ, Denstedt JT, Trelford CB, Li EA, Hutnik CML.

Exp Eye Res. 2019 Mar 23;182:65-73. doi: 10.1016/j.exer.2019.03.015. [Epub ahead of print]


Buoyancy-Driven Gradients for Biomaterial Fabrication and Tissue Engineering.

Li C, Ouyang L, Pence IJ, Moore AC, Lin Y, Winter CW, Armstrong JPK, Stevens MM.

Adv Mater. 2019 Apr;31(17):e1900291. doi: 10.1002/adma.201900291. Epub 2019 Mar 7.


Emerging Technologies for Tissue Engineering: From Gene Editing to Personalized Medicine.

Armstrong J, Stevens M.

Tissue Eng Part A. 2019 Feb 22. doi: 10.1089/ten.TEA.2019.0026. [Epub ahead of print]


Strongly Correlated Aromatic Molecular Conductor.

Hu Y, Zhong G, Guan YS, Armstrong JN, Li C, Liu C, N'Diaye A, Bhattacharya A, Ren S.

Small. 2019 Apr;15(14):e1900299. doi: 10.1002/smll.201900299. Epub 2019 Feb 20.


Massive-Scale Binding Free Energy Simulations of HIV Integrase Complexes Using Asynchronous Replica Exchange Framework Implemented on the IBM WCG Distributed Network.

Xia J, Flynn W, Gallicchio E, Uplinger K, Armstrong JD, Forli S, Olson AJ, Levy RM.

J Chem Inf Model. 2019 Feb 22. doi: 10.1021/acs.jcim.8b00817. [Epub ahead of print]


Activity-based Training on a Treadmill with Spinal Cord Injured Wistar Rats.

Gumbel JH, Steadman CJ, Hoey RF, Armstrong JE, Fell JD, Yang CB, Montgomery LR, Hubscher CH.

J Vis Exp. 2019 Jan 16;(143). doi: 10.3791/58983.


Alkali-Metal-Intercalated Percolation Network Regulates Self-Assembled Electronic Aromatic Molecules.

Hu Y, Zhong G, Guan YS, Lee NH, Zhang Y, Li Y, Mitchell T, Armstrong JN, Benedict J, Hla SW, Ren S.

Adv Mater. 2019 Mar;31(11):e1807178. doi: 10.1002/adma.201807178. Epub 2019 Jan 24.


Spatiotemporal quantification of acoustic cell patterning using Voronoï tessellation.

Armstrong JPK, Maynard SA, Pence IJ, Franklin AC, Drinkwater BW, Stevens MM.

Lab Chip. 2019 Feb 12;19(4):562-573. doi: 10.1039/c8lc01108g.


Chemoenzymatic Hydrogen Production from Methanol through the Interplay of Metal Complexes and Biocatalysts.

Tavakoli G, Armstrong JE, Naapuri JM, Deska J, Prechtl MHG.

Chemistry. 2019 Jan 16. doi: 10.1002/chem.201806351. [Epub ahead of print]


Muscle Involvement in a Large Cohort of Pediatric Patients with Genetic Diagnosis of Mitochondrial Disease.

Jou C, Ortigoza-Escobar JD, O'Callaghan MM, Nascimento A, Darling A, Pias-Peleteiro L, Perez-Dueñas B, Pineda M, Codina A, Arjona C, Armstrong J, Palau F, Ribes A, Gort L, Tort F, Navas P, Ruiz-Pesini E, Emperador S, Lopez-Gallardo E, Bayona-Bafaluy P, Montero R, Jimenez-Mallebrera C, Garcia-Cazorla A, Montoya J, Yubero D, Artuch R.

J Clin Med. 2019 Jan 10;8(1). pii: E68. doi: 10.3390/jcm8010068.


Accuracy gains from conservative forecasting: Tests using variations of 19 econometric models to predict 154 elections in 10 countries.

Graefe A, Green KC, Armstrong JS.

PLoS One. 2019 Jan 10;14(1):e0209850. doi: 10.1371/journal.pone.0209850. eCollection 2019.


Behavior Responses to Chemical and Optogenetic Stimuli in Drosophila Larvae.

Clark DA, Odell SR, Armstrong JM, Turcotte M, Kohler D, Mathis A, Schmidt DR, Mathew D.

Front Behav Neurosci. 2018 Dec 21;12:324. doi: 10.3389/fnbeh.2018.00324. eCollection 2018.


Durvalumab for recurrent or metastatic head and neck squamous cell carcinoma: Results from a single-arm, phase II study in patients with ≥25% tumour cell PD-L1 expression who have progressed on platinum-based chemotherapy.

Zandberg DP, Algazi AP, Jimeno A, Good JS, Fayette J, Bouganim N, Ready NE, Clement PM, Even C, Jang RW, Wong S, Keilholz U, Gilbert J, Fenton M, Braña I, Henry S, Remenar E, Papai Z, Siu LL, Jarkowski A, Armstrong JM, Asubonteng K, Fan J, Melillo G, Mesía R.

Eur J Cancer. 2019 Jan;107:142-152. doi: 10.1016/j.ejca.2018.11.015. Epub 2018 Dec 18.


Eutectic melt crystallization of L10-FePt.

Zhang J, Li C, Armstrong J, Ren S.

Chem Commun (Camb). 2019 Jan 10;55(5):656-658. doi: 10.1039/c8cc08199a.


Examining the role of estrogenic activity and ocean temperature on declines of a coastal demersal flatfish population near the municipal wastewater outfall of Orange County, California, USA.

Andrzejczyk N, Sakamoto K, Armstrong J, Schlenk D.

Mar Pollut Bull. 2018 Dec;137:129-136. doi: 10.1016/j.marpolbul.2018.10.005. Epub 2018 Oct 11.


Migratory coupling between predators and prey.

Furey NB, Armstrong JB, Beauchamp DA, Hinch SG.

Nat Ecol Evol. 2018 Dec;2(12):1846-1853. doi: 10.1038/s41559-018-0711-3. Epub 2018 Nov 22. Review.


Prospective Study of Central versus Peripheral Obesity in Total Knee Arthroplasty.

Armstrong JG, Morris TR, Sebro R, Israelite CL, Kamath AF.

Knee Surg Relat Res. 2018 Dec 1;30(4):319-325. doi: 10.5792/ksrr.18.025.


Methotrexate-Induced Vasculitis in a Child with Systemic Onset Juvenile Idiopathic Arthritis.

Markham R, Whittam LR, Armstrong J, Wilkinson N, Williamson L.

J Clin Rheumatol. 2018 Nov 14. doi: 10.1097/RHU.0000000000000923. [Epub ahead of print] No abstract available.


The impact of frailty and cognitive impairment on quality of life: employment and social context matter.

Godin J, Armstrong JJ, Wallace L, Rockwood K, Andrew MK.

Int Psychogeriatr. 2018 Nov 13:1-9. doi: 10.1017/S1041610218001710. [Epub ahead of print]


Treatment completion, treatment compliance and outcomes of old and very old patients treated by dose adapted stereotactic ablative radiotherapy (SABR) for T1-T3N0M0 non-small cell lung cancer.

Mihai A, Milano M, Santos A, Kennedy A, Thirion P, McDermott RS, Westrup J, Rock L, Armstrong J.

J Geriatr Oncol. 2018 Nov 10. pii: S1879-4068(18)30288-1. doi: 10.1016/j.jgo.2018.10.011. [Epub ahead of print]


Blood on board: The development of a prehospital blood transfusion program in a Canadian helicopter emergency medical service.

Krook C, O'Dochartaigh D, Martin D, Piggott Z, Deedo R, Painter S, van Werkhoven G, McKay D, Nesdoly D, Armstrong JN.

CJEM. 2018 Nov 8:1-9. doi: 10.1017/cem.2018.457. [Epub ahead of print]


What Is Your Neurologic Diagnosis?

Park KM, Armstrong JF, Ruby JL, Barber RM, Grimes JA, Kent M.

J Am Vet Med Assoc. 2018 Nov 15;253(10):1253-1257. doi: 10.2460/javma.253.10.1253. No abstract available.


Safety and Efficacy of Durvalumab With or Without Tremelimumab in Patients With PD-L1-Low/Negative Recurrent or Metastatic HNSCC: The Phase 2 CONDOR Randomized Clinical Trial.

Siu LL, Even C, Mesía R, Remenar E, Daste A, Delord JP, Krauss J, Saba NF, Nabell L, Ready NE, Braña I, Kotecki N, Zandberg DP, Gilbert J, Mehanna H, Bonomi M, Jarkowski A, Melillo G, Armstrong JM, Wildsmith S, Fayette J.

JAMA Oncol. 2018 Nov 1. doi: 10.1001/jamaoncol.2018.4628. [Epub ahead of print]


Whole-Genome Alignment and Comparative Annotation.

Armstrong J, Fiddes IT, Diekhans M, Paten B.

Annu Rev Anim Biosci. 2019 Feb 15;7:41-64. doi: 10.1146/annurev-animal-020518-115005. Epub 2018 Oct 31.


GENCODE reference annotation for the human and mouse genomes.

Frankish A, Diekhans M, Ferreira AM, Johnson R, Jungreis I, Loveland J, Mudge JM, Sisu C, Wright J, Armstrong J, Barnes I, Berry A, Bignell A, Carbonell Sala S, Chrast J, Cunningham F, Di Domenico T, Donaldson S, Fiddes IT, García Girón C, Gonzalez JM, Grego T, Hardy M, Hourlier T, Hunt T, Izuogu OG, Lagarde J, Martin FJ, Martínez L, Mohanan S, Muir P, Navarro FCP, Parker A, Pei B, Pozo F, Ruffier M, Schmitt BM, Stapleton E, Suner MM, Sycheva I, Uszczynska-Ratajczak B, Xu J, Yates A, Zerbino D, Zhang Y, Aken B, Choudhary JS, Gerstein M, Guigó R, Hubbard TJP, Kellis M, Paten B, Reymond A, Tress ML, Flicek P.

Nucleic Acids Res. 2019 Jan 8;47(D1):D766-D773. doi: 10.1093/nar/gky955.


Chromosome assembly of large and complex genomes using multiple references.

Kolmogorov M, Armstrong J, Raney BJ, Streeter I, Dunn M, Yang F, Odom D, Flicek P, Keane TM, Thybert D, Paten B, Pham S.

Genome Res. 2018 Nov;28(11):1720-1732. doi: 10.1101/gr.236273.118. Epub 2018 Oct 19.


Actinomadura vinacea isolated from a nonhealing cutaneous wound in a cat.

Wells B, Burnum AL, Armstrong J, Sanchez S, Stanton JB, Camus MS.

Vet Clin Pathol. 2018 Dec;47(4):638-642. doi: 10.1111/vcp.12659. Epub 2018 Oct 15.


Gender moderates the relationship between stressful life events and psychopathology: Findings from a national study.

Armstrong JL, Ronzitti S, Hoff RA, Potenza MN.

J Psychiatr Res. 2018 Dec;107:34-41. doi: 10.1016/j.jpsychires.2018.09.012. Epub 2018 Sep 20.


What makes playgroups therapeutic? A scoping review to identify the active ingredients of therapeutic and supported playgroups.

Armstrong J, Paskal K, Elliott C, Wray J, Davidson E, Mizen J, Girdler S.

Scand J Occup Ther. 2019 Mar;26(2):81-102. doi: 10.1080/11038128.2018.1498919. Epub 2018 Oct 9.


Engineering Anisotropic Muscle Tissue using Acoustic Cell Patterning.

Armstrong JPK, Puetzer JL, Serio A, Guex AG, Kapnisi M, Breant A, Zong Y, Assal V, Skaalure SC, King O, Murty T, Meinert C, Franklin AC, Bassindale PG, Nichols MK, Terracciano CM, Hutmacher DW, Drinkwater BW, Klein TJ, Perriman AW, Stevens MM.

Adv Mater. 2018 Oct;30(43):e1802649. doi: 10.1002/adma.201802649. Epub 2018 Sep 12.


Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci.

Lilue J, Doran AG, Fiddes IT, Abrudan M, Armstrong J, Bennett R, Chow W, Collins J, Collins S, Czechanski A, Danecek P, Diekhans M, Dolle DD, Dunn M, Durbin R, Earl D, Ferguson-Smith A, Flicek P, Flint J, Frankish A, Fu B, Gerstein M, Gilbert J, Goodstadt L, Harrow J, Howe K, Ibarra-Soria X, Kolmogorov M, Lelliott CJ, Logan DW, Loveland J, Mathews CE, Mott R, Muir P, Nachtweide S, Navarro FCP, Odom DT, Park N, Pelan S, Pham SK, Quail M, Reinholdt L, Romoth L, Shirley L, Sisu C, Sjoberg-Herrera M, Stanke M, Steward C, Thomas M, Threadgold G, Thybert D, Torrance J, Wong K, Wood J, Yalcin B, Yang F, Adams DJ, Paten B, Keane TM.

Nat Genet. 2018 Nov;50(11):1574-1583. doi: 10.1038/s41588-018-0223-8. Epub 2018 Oct 1.


Guidelines for Clinical Target Volume Definition for Perineural Spread of Major Salivary Gland Cancers.

Armstrong K, Ward J, Hughes NM, Mihai A, Blayney A, Mascott C, Kileen R, Armstrong J.

Clin Oncol (R Coll Radiol). 2018 Dec;30(12):773-779. doi: 10.1016/j.clon.2018.08.018. Epub 2018 Sep 14.


Enlarging growth of the mental region in a 48-year-old man.

Cox J, Armstrong JE, Pandey S, Wehrli B, Chan KC, McCord C.

Oral Surg Oral Med Oral Pathol Oral Radiol. 2018 Jul 20. pii: S2212-4403(18)31032-0. doi: 10.1016/j.oooo.2018.07.002. [Epub ahead of print] No abstract available.


The preprint.

Armstrong JW.

Nature. 2018 Aug;560(7718):404. doi: 10.1038/d41586-018-05945-w. No abstract available.


Validation of a Simulation-training Model for Robotic Intracorporeal Bowel Anastomosis Using a Step-by-step Technique.

von Rundstedt FC, Aghazadeh MA, Scovell J, Slawin J, Armstrong J, Silay S, Goh AC.

Urology. 2018 Oct;120:125-130. doi: 10.1016/j.urology.2018.07.035. Epub 2018 Aug 6.


Regional Diversity in the Postsynaptic Proteome of the Mouse Brain.

Roy M, Sorokina O, McLean C, Tapia-González S, DeFelipe J, Armstrong JD, Grant SGN.

Proteomes. 2018 Aug 1;6(3). pii: E31. doi: 10.3390/proteomes6030031.


Impact of anabolic androgenic steroids on sexual function.

Armstrong JM, Avant RA, Charchenko CM, Westerman ME, Ziegelmann MJ, Miest TS, Trost LW.

Transl Androl Urol. 2018 Jun;7(3):483-489. doi: 10.21037/tau.2018.04.23.


F1F0-ATP Synthase Inhibitory Factor 1 in the Normal Pancreas and in Pancreatic Ductal Adenocarcinoma: Effects on Bioenergetics, Invasion and Proliferation.

Tanton H, Voronina S, Evans A, Armstrong J, Sutton R, Criddle DN, Haynes L, Schmid MC, Campbell F, Costello E, Tepikin AV.

Front Physiol. 2018 Jul 11;9:833. doi: 10.3389/fphys.2018.00833. eCollection 2018.


Phenological tracking associated with increased salmon consumption by brown bears.

Deacy WW, Erlenbach JA, Leacock WB, Stanford JA, Robbins CT, Armstrong JB.

Sci Rep. 2018 Jul 20;8(1):11008. doi: 10.1038/s41598-018-29425-3.


Cerebrospinal fluid monoamines, pterins, and folate in patients with mitochondrial diseases: systematic review and hospital experience.

Batllori M, Molero-Luis M, Ormazabal A, Montero R, Sierra C, Ribes A, Montoya J, Ruiz-Pesini E, O'Callaghan M, Pias L, Nascimento A, Palau F, Armstrong J, Yubero D, Ortigoza-Escobar JD, García-Cazorla A, Artuch R.

J Inherit Metab Dis. 2018 Nov;41(6):1147-1158. doi: 10.1007/s10545-018-0224-x. Epub 2018 Jul 4.


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