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Vaccines inducing immunity to Lassa virus glycoprotein and nucleoprotein protect macaques after a single shot.

Mateo M, Reynard S, Carnec X, Journeaux A, Baillet N, Schaeffer J, Picard C, Legras-Lachuer C, Allan R, Perthame E, Hillion KH, Pietrosemoli N, Dillies MA, Barrot L, Vallve A, Barron S, Fellmann L, Gaillard JC, Armengaud J, Carbonnelle C, Raoul H, Tangy F, Baize S.

Sci Transl Med. 2019 Oct 2;11(512). pii: eaaw3163. doi: 10.1126/scitranslmed.aaw3163.


De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups.

Cogne Y, Degli-Esposti D, Pible O, Gouveia D, François A, Bouchez O, Eché C, Ford A, Geffard O, Armengaud J, Chaumot A, Almunia C.

Sci Data. 2019 Sep 27;6(1):184. doi: 10.1038/s41597-019-0192-5.


Evaluation of Sample Preparation Methods for Fast Proteotyping of Microorganisms by Tandem Mass Spectrometry.

Hayoun K, Gouveia D, Grenga L, Pible O, Armengaud J, Alpha-Bazin B.

Front Microbiol. 2019 Sep 6;10:1985. doi: 10.3389/fmicb.2019.01985. eCollection 2019.


Proteases as secreted exoproteins in mycoplasmas from ruminant lungs and impact on surface exposed proteins.

Ganter S, Miotello G, Manso-Silván L, Armengaud J, Tardy F, Gaurivaud P, Thiaucourt F.

Appl Environ Microbiol. 2019 Sep 20. pii: AEM.01439-19. doi: 10.1128/AEM.01439-19. [Epub ahead of print]


Coupling caging and proteomics on the European flounder (Platichthys flesus) to assess the estuarine water quality at micro scale.

Borcier E, Artigaud S, Gaillard JC, Armengaud J, Charrier G, Couteau J, Receveur J, Ouddane B, Diop M, Amara R, Laroche J, Pichereau V.

Sci Total Environ. 2019 Aug 5;695:133760. doi: 10.1016/j.scitotenv.2019.133760. [Epub ahead of print]


Comparative proteomics in the wild: Accounting for intrapopulation variability improves describing proteome response in a Gammarus pulex field population exposed to cadmium.

Cogne Y, Almunia C, Gouveia D, Pible O, François A, Degli-Esposti D, Geffard O, Armengaud J, Chaumot A.

Aquat Toxicol. 2019 Sep;214:105244. doi: 10.1016/j.aquatox.2019.105244. Epub 2019 Jul 10.


C-terminal proteolysis of the collagen VI α3 chain by BMP-1 and proprotein convertase(s) releases endotrophin in fragments of different sizes.

Heumüller SE, Talantikite M, Napoli M, Armengaud J, Mörgelin M, Hartmann U, Sengle G, Paulsson M, Moali C, Wagener R.

J Biol Chem. 2019 Sep 13;294(37):13769-13780. doi: 10.1074/jbc.RA119.008641. Epub 2019 Jul 25.


[When everything is frozen, start moving again: the FIT@CHUV program].

Armengaud JB, Vaucher S, Roche O, Dahner L, Tarditi B, Luisier M, Hodot C, Mercier AA, Deppen A, Ambresin AE.

Rev Med Suisse. 2019 Jun 19;15(656):1276-1280. French.


Co-expression network analysis identifies gonad- and embryo-associated protein modules in the sentinel species Gammarus fossarum.

Degli Esposti D, Almunia C, Guery MA, Koenig N, Armengaud J, Chaumot A, Geffard O.

Sci Rep. 2019 May 27;9(1):7862. doi: 10.1038/s41598-019-44203-5.


Biosafety of Mesoporous Silica Nanoparticles.

Rascol E, Pisani C, Dorandeu C, Nyalosaso JL, Charnay C, Daurat M, Da Silva A, Devoisselle JM, Gaillard JC, Armengaud J, Prat O, Maynadier M, Gary-Bobo M, Garcia M, Chopineau J, Guari Y.

Biomimetics (Basel). 2018 Aug 15;3(3). pii: E22. doi: 10.3390/biomimetics3030022.


Comparative genomics and proteogenomics highlight key molecular players involved in Frankia sporulation.

Béthencourt L, Boubakri H, Taib N, Normand P, Armengaud J, Fournier P, Brochier-Armanet C, Herrera-Belaroussi A.

Res Microbiol. 2019 Jun - Aug;170(4-5):202-213. doi: 10.1016/j.resmic.2019.04.002. Epub 2019 Apr 21.


The immune system of the freshwater zebra mussel, Dreissena polymorpha, decrypted by proteogenomics of hemocytes and plasma compartments.

Leprêtre M, Almunia C, Armengaud J, Salvador A, Geffard A, Palos-Ladeiro M.

J Proteomics. 2019 Jun 30;202:103366. doi: 10.1016/j.jprot.2019.04.016. Epub 2019 Apr 20.


Omics of the early molecular dialogue between Frankia alni and Alnus glutinosa and the cellulase synton.

Pujic P, Alloisio N, Fournier P, Roche D, Sghaier H, Miotello G, Armengaud J, Berry AM, Normand P.

Environ Microbiol. 2019 Mar 27. doi: 10.1111/1462-2920.14606. [Epub ahead of print]


Ecotoxicoproteomics: A decade of progress in our understanding of anthropogenic impact on the environment.

Gouveia D, Almunia C, Cogne Y, Pible O, Degli-Esposti D, Salvador A, Cristobal S, Sheehan D, Chaumot A, Geffard O, Armengaud J.

J Proteomics. 2019 Apr 30;198:66-77. doi: 10.1016/j.jprot.2018.12.001. Epub 2018 Dec 6.


Proteomics data for characterizing Microbacterium oleivorans A9, an uranium-tolerant actinobacterium isolated near the Chernobyl nuclear power plant.

Gallois N, Piette L, Ortet P, Bakarat M, Long J, Berthomieu C, Armengaud J, Chapon V, Alpha-Bazin B.

Data Brief. 2018 Oct 30;21:1125-1129. doi: 10.1016/j.dib.2018.10.136. eCollection 2018 Dec.


Rhodobacter sphaeroides methionine sulfoxide reductase P reduces R- and S-diastereomers of methionine sulfoxide from a broad-spectrum of protein substrates.

Tarrago L, Grosse S, Siponen MI, Lemaire D, Alonso B, Miotello G, Armengaud J, Arnoux P, Pignol D, Sabaty M.

Biochem J. 2018 Dec 6;475(23):3779-3795. doi: 10.1042/BCJ20180706.


Assessing the ratio of Bacillus spores and vegetative cells by shotgun proteomics.

Mappa C, Pible O, Armengaud J, Alpha-Bazin B.

Environ Sci Pollut Res Int. 2018 Oct 9. doi: 10.1007/s11356-018-3341-z. [Epub ahead of print]


Offspring of mothers with hyperglycaemia in pregnancy: The short term and long-term impact. What is new?

Armengaud JB, Ma RCW, Siddeek B, Visser GHA, Simeoni U.

Diabetes Res Clin Pract. 2018 Nov;145:155-166. doi: 10.1016/j.diabres.2018.07.039. Epub 2018 Aug 6. Review.


Effect of early postnatal nutrition on chronic kidney disease and arterial hypertension in adulthood: a narrative review.

Juvet C, Simeoni U, Yzydorczyk C, Siddeek B, Armengaud JB, Nardou K, Juvet P, Benahmed M, Cachat F, Chehade H.

J Dev Orig Health Dis. 2018 Dec;9(6):598-614. doi: 10.1017/S2040174418000454. Epub 2018 Aug 6. Review.


Improving Quality Control of Contagious Caprine Pleuropneumonia Vaccine with Tandem Mass Spectrometry.

Thiaucourt F, Pible O, Miotello G, Nwankpa N, Armengaud J.

Proteomics. 2018 Sep;18(17):e1800088. doi: 10.1002/pmic.201800088. Epub 2018 Aug 20.


Time-course proteomics dataset to monitor protein-bound methionine oxidation in Bacillus cereus ATCC 14579.

Madeira JP, Alpha-Bazin B, Armengaud J, Duport C.

Data Brief. 2018 Mar 10;18:394-398. doi: 10.1016/j.dib.2018.03.030. eCollection 2018 Jun.


Perinatal Origins of Adult Disease.

Simeoni U, Armengaud JB, Siddeek B, Tolsa JF.

Neonatology. 2018;113(4):393-399. doi: 10.1159/000487618. Epub 2018 May 31. Review.


Transient postnatal over nutrition induces long-term alterations in cardiac NLRP3-inflammasome pathway.

Siddeek B, Li N, Mauduit C, Chehade H, Rigal E, Tolsa JF, Armengaud JB, Yzydorczyk C, Benahmed M, Vergely C, Simeoni U.

Nutr Metab Cardiovasc Dis. 2018 Sep;28(9):944-951. doi: 10.1016/j.numecd.2018.03.013. Epub 2018 Apr 14.


[Together we are stronger: management of complex functional disorders during adolescence].

Ambresin AE, Deppen A, Hofer M, Dahner L, Roche O, Huguenin Dezot M, Beltrami D, Nouvellet P, Armengaud JB.

Rev Med Suisse. 2018 Apr 18;14(603):839-842. French.


Importance of Post-translational Modifications in the Interaction of Proteins with Mineral Surfaces: The Case of Arginine Methylation and Silica surfaces.

Marichal L, Renault JP, Chédin S, Lagniel G, Klein G, Aude JC, Tellier-Lebegue C, Armengaud J, Pin S, Labarre J, Boulard Y.

Langmuir. 2018 May 8;34(18):5312-5322. doi: 10.1021/acs.langmuir.8b00752. Epub 2018 Apr 25.


Identification, expression, and endocrine-disruption of three ecdysone-responsive genes in the sentinel species Gammarus fossarum.

Gouveia D, Bonneton F, Almunia C, Armengaud J, Quéau H, Degli-Esposti D, Geffard O, Chaumot A.

Sci Rep. 2018 Feb 28;8(1):3793. doi: 10.1038/s41598-018-22235-7.


The PEG-responding desiccome of the alder microsymbiont Frankia alni.

Ghedira K, Harigua-Souiai E, Ben Hamda C, Fournier P, Pujic P, Guesmi S, Guizani I, Miotello G, Armengaud J, Normand P, Sghaier H.

Sci Rep. 2018 Jan 15;8(1):759. doi: 10.1038/s41598-017-18839-0.


Proteogenomic insights into uranium tolerance of a Chernobyl's Microbacterium bacterial isolate.

Gallois N, Alpha-Bazin B, Ortet P, Barakat M, Piette L, Long J, Berthomieu C, Armengaud J, Chapon V.

J Proteomics. 2018 Apr 15;177:148-157. doi: 10.1016/j.jprot.2017.11.021. Epub 2017 Dec 6.


Ecotoxico-Proteomics for Aquatic Environmental Monitoring: First in Situ Application of a New Proteomics-Based Multibiomarker Assay Using Caged Amphipods.

Gouveia D, Chaumot A, Charnot A, Almunia C, François A, Navarro L, Armengaud J, Salvador A, Geffard O.

Environ Sci Technol. 2017 Nov 21;51(22):13417-13426. doi: 10.1021/acs.est.7b03736. Epub 2017 Nov 7.


Transient postnatal overfeeding causes liver stress-induced premature senescence in adult mice.

Yzydorczyk C, Li N, Chehade H, Mosig D, Bidho M, Keshavjee B, Armengaud JB, Nardou K, Siddeek B, Benahmed M, Vergely C, Simeoni U.

Sci Rep. 2017 Oct 10;7(1):12911. doi: 10.1038/s41598-017-11756-2.


Proteogenomic Insights into the Intestinal Parasite Blastocystis sp. Subtype 4 Isolate WR1.

Armengaud J, Pible O, Gaillard JC, Cian A, Gantois N, Tan KSW, Chabé M, Viscogliosi E.

Proteomics. 2017 Nov;17(21). doi: 10.1002/pmic.201700211. Epub 2017 Oct 16.


Methionine Residues in Exoproteins and Their Recycling by Methionine Sulfoxide Reductase AB Serve as an Antioxidant Strategy in Bacillus cereus.

Madeira JP, Alpha-Bazin BM, Armengaud J, Duport C.

Front Microbiol. 2017 Jul 26;8:1342. doi: 10.3389/fmicb.2017.01342. eCollection 2017.


The species origin of the serum in the culture medium influences the in vitro toxicity of silica nanoparticles to HepG2 cells.

Pisani C, Rascol E, Dorandeu C, Gaillard JC, Charnay C, Guari Y, Chopineau J, Armengaud J, Devoisselle JM, Prat O.

PLoS One. 2017 Aug 10;12(8):e0182906. doi: 10.1371/journal.pone.0182906. eCollection 2017.


Proteogenomics data for deciphering Frankia coriariae interactions with root exudates from three host plants.

Miotello G, Ktari A, Gueddou A, Nouioui I, Ghodhbane-Gtari F, Armengaud J, Gtari M.

Data Brief. 2017 Jul 11;14:73-76. doi: 10.1016/j.dib.2017.07.009. eCollection 2017 Oct.


Assessing the relevance of a multiplexed methodology for proteomic biomarker measurement in the invertebrate species Gammarus fossarum: A physiological and ecotoxicological study.

Gouveia D, Chaumot A, Charnot A, Queau H, Armengaud J, Almunia C, Salvador A, Geffard O.

Aquat Toxicol. 2017 Sep;190:199-209. doi: 10.1016/j.aquatox.2017.07.007. Epub 2017 Jul 17.


[Novelties 2016 in pediatrics].

Fischer Fumeaux CJ, Fletgen Richard C, Goncalves Pereira Pinto D, Stadelmann C, Avignon V, Vial Y, Tolsa JF, Ambresin AE, Armengaud JB, Castaneda M, Coti-Bertrand P, Deppen A, Duvoisin G, Gebhard S, Holzer L, Lier F, Monney Chaubert C, Pauchard JY, Typaldou SA, Hofer M.

Rev Med Suisse. 2017 Jan 11;13(544-545):92-95. Review. French.


Nutrient recycling facilitates long-term stability of marine microbial phototroph-heterotroph interactions.

Christie-Oleza JA, Sousoni D, Lloyd M, Armengaud J, Scanlan DJ.

Nat Microbiol. 2017 Jun 26;2:17100. doi: 10.1038/nmicrobiol.2017.100.


6- Versus 24-Month Dual Antiplatelet Therapy After Implantation of Drug-Eluting Stents in Patients Nonresistant to Aspirin: Final Results of the ITALIC Trial (Is There a Life for DES After Discontinuation of Clopidogrel).

Didier R, Morice MC, Barragan P, Noryani AAL, Noor HA, Majwal T, Hovasse T, Castellant P, Schneeberger M, Maillard L, Bressolette E, Wojcik J, Delarche N, Blanchard D, Jouve B, Ormezzano O, Paganelli F, Levy G, Sainsous J, Carrie D, Furber A, Berlan J, Darremont O, Le Breton H, Lyuycx-Bore A, Gommeaux A, Cassat C, Kermarrec A, Cazaux P, Druelles P, Dauphin R, Armengaud J, Dupouy P, Champagnac D, Ohlmann P, Ben Amer H, Kiss RG, Ungi I, Gilard M.

JACC Cardiovasc Interv. 2017 Jun 26;10(12):1202-1210. doi: 10.1016/j.jcin.2017.03.049.


Defining Diagnostic Biomarkers Using Shotgun Proteomics and MALDI-TOF Mass Spectrometry.

Armengaud J.

Methods Mol Biol. 2017;1616:107-120. doi: 10.1007/978-1-4939-7037-7_6.


Host Plant Compatibility Shapes the Proteogenome of Frankia coriariae.

Ktari A, Gueddou A, Nouioui I, Miotello G, Sarkar I, Ghodhbane-Gtari F, Sen A, Armengaud J, Gtari M.

Front Microbiol. 2017 May 2;8:720. doi: 10.3389/fmicb.2017.00720. eCollection 2017.


Low phosphate activates STOP1-ALMT1 to rapidly inhibit root cell elongation.

Balzergue C, Dartevelle T, Godon C, Laugier E, Meisrimler C, Teulon JM, Creff A, Bissler M, Brouchoud C, Hagège A, Müller J, Chiarenza S, Javot H, Becuwe-Linka N, David P, Péret B, Delannoy E, Thibaud MC, Armengaud J, Abel S, Pellequer JL, Nussaume L, Desnos T.

Nat Commun. 2017 May 15;8:15300. doi: 10.1038/ncomms15300.


Endothelial dysfunction in individuals born after fetal growth restriction: cardiovascular and renal consequences and preventive approaches.

Yzydorczyk C, Armengaud JB, Peyter AC, Chehade H, Cachat F, Juvet C, Siddeek B, Simoncini S, Sabatier F, Dignat-George F, Mitanchez D, Simeoni U.

J Dev Orig Health Dis. 2017 Aug;8(4):448-464. doi: 10.1017/S2040174417000265. Epub 2017 May 2. Review.


Experimental separation steps influence the protein content of corona around mesoporous silica nanoparticles.

Pisani C, Gaillard JC, Dorandeu C, Charnay C, Guari Y, Chopineau J, Devoisselle JM, Armengaud J, Prat O.

Nanoscale. 2017 May 11;9(18):5769-5772. doi: 10.1039/c7nr01654a.


Multiplexed assay for protein quantitation in the invertebrate Gammarus fossarum by liquid chromatography coupled to tandem mass spectrometry.

Charnot A, Gouveia D, Armengaud J, Almunia C, Chaumot A, Lemoine J, Geffard O, Salvador A.

Anal Bioanal Chem. 2017 Jun;409(16):3969-3991. doi: 10.1007/s00216-017-0348-0. Epub 2017 Apr 17.


Conservation and diversity of the IrrE/DdrO-controlled radiation response in radiation-resistant Deinococcus bacteria.

Blanchard L, Guérin P, Roche D, Cruveiller S, Pignol D, Vallenet D, Armengaud J, de Groot A.

Microbiologyopen. 2017 Aug;6(4). doi: 10.1002/mbo3.477. Epub 2017 Apr 11.


Draft Genome Sequence of Microbacterium oleivorans Strain A9, a Bacterium Isolated from Chernobyl Radionuclide-Contaminated Soil.

Ortet P, Gallois N, Piette L, Long J, Berthomieu C, Armengaud J, Barakat M, Chapon V.

Genome Announc. 2017 Apr 6;5(14). pii: e00092-17. doi: 10.1128/genomeA.00092-17.


Exoproteomics of Pathogens: Analysis of Toxins and Other Virulence Factors by Proteomics.

Armengaud J, Duport C.

Methods Enzymol. 2017;586:211-227. doi: 10.1016/bs.mie.2016.09.033.


Reannotation of Genomes by Means of Proteomics Data.

Armengaud J.

Methods Enzymol. 2017;585:201-216. doi: 10.1016/bs.mie.2016.09.019. Epub 2016 Oct 19.


Emerin self-assembly mechanism: role of the LEM domain.

Samson C, Celli F, Hendriks K, Zinke M, Essawy N, Herrada I, Arteni AA, Theillet FX, Alpha-Bazin B, Armengaud J, Coirault C, Lange A, Zinn-Justin S.

FEBS J. 2017 Jan;284(2):338-352. doi: 10.1111/febs.13983. Epub 2017 Jan 9.

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