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Characterisation of incompatibility groups and plasmid addiction systems in a collection of multiresistant-producing Klebsiella pneumoniae strains.

Emeraud C, Villageois-Tran K, Genel N, Surgers L, Sougakoff W, Arlet G, Bonnin RA, Decré D, Eckert C.

Int J Antimicrob Agents. 2019 Nov 23:105855. doi: 10.1016/j.ijantimicag.2019.11.012. [Epub ahead of print] No abstract available.


Specialization of small non-conjugative plasmids in Escherichia coli according to their family types.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Barbe V, Roche D, Médigue C, Arlet G, Denamur E.

Microb Genom. 2019 Sep;5(9). doi: 10.1099/mgen.0.000281. Epub 2019 Aug 5.


Novel patterns in the molecular epidemiology of KPC-producing Klebsiella pneumoniae in Tucumán, Argentina.

Jure MA, Castillo ME, Musa HE, López CG, Cáceres MA, Mochi SD, Bousquet AA, Genel NA, Arlet GA, Decré DC.

J Glob Antimicrob Resist. 2019 Dec;19:183-187. doi: 10.1016/j.jgar.2019.02.015. Epub 2019 Mar 22.


Molecular epidemiology of ESBL-producing E. coli and K. pneumoniae: establishing virulence clusters.

Surgers L, Boersma P, Girard PM, Homor A, Geneste D, Arlet G, Decré D, Boyd A.

Infect Drug Resist. 2018 Dec 31;12:119-127. doi: 10.2147/IDR.S179134. eCollection 2019.


Acquisition of plasmid-mediated cephalosporinase producing Enterobacteriaceae after a travel to the tropics.

Lorme F, Maataoui N, Rondinaud E, Esposito-Farèse M, Clermont O, Ruppe E, Arlet G, Genel N; VOYAG-R study group, Matheron S, Andremont A, Armand-Lefevre L.

PLoS One. 2018 Dec 18;13(12):e0206909. doi: 10.1371/journal.pone.0206909. eCollection 2018.


Biofilm formation by ESBL-producing strains of Escherichia coli and Klebsiella pneumoniae.

Surgers L, Boyd A, Girard PM, Arlet G, Decré D.

Int J Med Microbiol. 2019 Jan;309(1):13-18. doi: 10.1016/j.ijmm.2018.10.008. Epub 2018 Oct 24.


Extended-spectrum β-lactamase-encoding genes are spreading on a wide range of Escherichia coli plasmids existing prior to the use of third-generation cephalosporins.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Fouteau S, Barbe V, Roche D, Cruveiller S, Médigue C, Castellanos M, Decré D, Drieux-Rouze L, Clermont O, Glodt J, Tenaillon O, Cloeckaert A, Arlet G, Denamur E.

Microb Genom. 2018 Sep;4(9). doi: 10.1099/mgen.0.000203. Epub 2018 Aug 6.


An Outbreak of NDM-1-Producing Klebsiella pneumoniae, Associated with OmpK35 and OmpK36 Porin Loss in Tunisia.

Hamzaoui Z, Ocampo-Sosa A, Maamar E, Fernandez Martinez M, Ferjani S, Hammami S, Harbaoui S, Genel N, Arlet G, Saidani M, Slim A, Boutiba-Ben Boubaker I, Martinez-Martinez L.

Microb Drug Resist. 2018 Oct;24(8):1137-1147. doi: 10.1089/mdr.2017.0165. Epub 2018 Jan 26.


Emergence of Plasmid-Mediated Fosfomycin-Resistance Genes among Escherichia coli Isolates, France.

Benzerara Y, Gallah S, Hommeril B, Genel N, Decré D, Rottman M, Arlet G.

Emerg Infect Dis. 2017 Sep;23(9):1564-1567. doi: 10.3201/eid2309.170560.


β LACTA test performance for detection of extended-spectrum β-lactamase-producing Gram-negative bacilli directly on bronchial aspirates samples: a validation study.

Gallah S, Benzerara Y, Tankovic J, Woerther PL, Bensekri H, Mainardi JL, Arlet G, Vimont S, Garnier M.

Clin Microbiol Infect. 2018 Apr;24(4):402-408. doi: 10.1016/j.cmi.2017.07.030. Epub 2017 Aug 3.


A Long-Term Study of the Diversity of OXA-48-Like Carbapenemase-Producing Bacterial Strains in Infected Patients and Carriers.

Woerther PL, Jardak T, Ben Hassine I, Forget S, Chachaty E, Arlet G, Decré D.

Microb Drug Resist. 2018 Mar;24(2):181-189. doi: 10.1089/mdr.2017.0060. Epub 2017 Jul 14.


Evaluation of early antimicrobial therapy adaptation guided by the BetaLACTA® test: a case-control study.

Garnier M, Rozencwajg S, Pham T, Vimont S, Blayau C, Hafiani M, Fulgencio JP, Bonnet F, Mainardi JL, Arlet G, Fartoukh M, Gallah S, Quesnel C.

Crit Care. 2017 Jun 28;21(1):161. doi: 10.1186/s13054-017-1746-6.


Clostridium difficile bacteremia: Report of two cases in French hospitals and comprehensive review of the literature.

Doufair M, Eckert C, Drieux L, Amani-Moibeni C, Bodin L, Denis M, Grange JD, Arlet G, Barbut F.

IDCases. 2017 Mar 28;8:54-62. doi: 10.1016/j.idcr.2017.03.012. eCollection 2017.


Clinical and microbiological determinants of severe and fatal outcomes in patients infected with Enterobacteriaceae producing extended-spectrum β-lactamase.

Surgers L, Boyd A, Boelle PY, Lalande V, Jolivot PA, Girard PM, Arlet G, Cambier C, Homor A, Decre D, Meynard JL.

Eur J Clin Microbiol Infect Dis. 2017 Jul;36(7):1261-1268. doi: 10.1007/s10096-017-2932-9. Epub 2017 Feb 8.


Reply to "Noncarbapenemase OXA-48 Variants (OXA-163 and OXA-405) Falsely Detected as Carbapenemases by the β Carba Test".

Arlet G, Decré D, Lavollay M, Podglajen I.

J Clin Microbiol. 2017 Feb;55(2):656-657. doi: 10.1128/JCM.02114-16. No abstract available.


Diversity and functionality of plasmid-borne VagCD toxin-antitoxin systems of Klebsiella pneumoniae.

Duprilot M, Decre D, Genel N, Drieux L, Sougakoff W, Arlet G.

J Antimicrob Chemother. 2017 May 1;72(5):1320-1326. doi: 10.1093/jac/dkw569.


Assessment of Carbapenem Resistance in Enterobacteriaceae with the Rapid and Easy-to-Use Chromogenic β Carba Test.

Compain F, Gallah S, Eckert C, Arlet G, Ramahefasolo A, Decré D, Lavollay M, Podglajen I.

J Clin Microbiol. 2016 Dec;54(12):3065-3068. Epub 2016 Sep 28. No abstract available.


Prevalence of O25b-ST131 clone among Escherichia coli strains producing CTX-M-15, CTX-M-14 and CTX-M-92 β-lactamases.

Giedraitienė A, Vitkauskienė A, Pavilonis A, Patamsytė V, Genel N, Decre D, Arlet G.

Infect Dis (Lond). 2017 Feb;49(2):106-112. Epub 2016 Aug 26.


ESBL-Producing Strain of Hypervirulent Klebsiella pneumoniae K2, France.

Surgers L, Boyd A, Girard PM, Arlet G, Decré D.

Emerg Infect Dis. 2016 Sep;22(9):1687-8. doi: 10.3201/eid2209.160681. No abstract available.


Molecular detection of CTX-M-15-type β-lactamases in Escherichia coli strains from Senegal.

Dia ML, Ngom B, Diagne R, Ka R, Lo S, Cisse MF, Arlet G, Sow AI.

New Microbes New Infect. 2015 Nov 23;9:45-6. doi: 10.1016/j.nmni.2015.11.009. eCollection 2016 Jan.


Transfer between an Algerian and a French hospital of four multi-drug resistant bacterial strains together via a single patient.

Moissenet D, Richard P, Granados M, Mérens A, Fournier D, Fines-Guyon M, Arlet G, Vu-Thien H.

Int J Burns Trauma. 2015 Oct 12;5(3):82-5. eCollection 2015.


Cooccurrence of Multiple AmpC β-Lactamases in Escherichia coli, Klebsiella pneumoniae, and Proteus mirabilis in Tunisia.

Chérif T, Saidani M, Decré D, Boutiba-Ben Boubaker I, Arlet G.

Antimicrob Agents Chemother. 2015 Oct 12;60(1):44-51. doi: 10.1128/AAC.00828-15. Print 2016 Jan.


Partition locus-based classification of selected plasmids in Klebsiella pneumoniae, Escherichia coli and Salmonella enterica spp.: an additional tool.

Bousquet A, Henquet S, Compain F, Genel N, Arlet G, Decré D.

J Microbiol Methods. 2015 Mar;110:85-91. doi: 10.1016/j.mimet.2015.01.019. Epub 2015 Jan 24.


Genomic definition of hypervirulent and multidrug-resistant Klebsiella pneumoniae clonal groups.

Bialek-Davenet S, Criscuolo A, Ailloud F, Passet V, Jones L, Delannoy-Vieillard AS, Garin B, Le Hello S, Arlet G, Nicolas-Chanoine MH, Decré D, Brisse S.

Emerg Infect Dis. 2014 Nov;20(11):1812-20. doi: 10.3201/eid2011.140206.


Multiplex PCR for detection of seven virulence factors and K1/K2 capsular serotypes of Klebsiella pneumoniae.

Compain F, Babosan A, Brisse S, Genel N, Audo J, Ailloud F, Kassis-Chikhani N, Arlet G, Decré D.

J Clin Microbiol. 2014 Dec;52(12):4377-80. doi: 10.1128/JCM.02316-14. Epub 2014 Oct 1.


First case of multidrug-resistant blaNDM-1- and blaOXA-232-carrying Klebsiella pneumoniae and its probable cross-transmission in a French hospital.

Bousquet A, Duprilot M, Moissenet D, Salauze B, Rambaud J, Genel N, Vu-Thien H, Arlet G, Decré D.

Int J Antimicrob Agents. 2014 Nov;44(5):469-70. doi: 10.1016/j.ijantimicag.2014.06.004. Epub 2014 Jul 19. No abstract available.


Emergence of KPC-2-Producing Salmonella enterica Serotype Schwarzengrund in Argentina.

Jure MA, Duprilot M, Musa HE, López C, de Castillo MC, Weill FX, Arlet G, Decré D.

Antimicrob Agents Chemother. 2014 Oct;58(10):6335-6. doi: 10.1128/AAC.03322-14. Epub 2014 Aug 11. No abstract available.


The β-Lacta test for direct detection of extended-spectrum-β-lactamase-producing Enterobacteriaceae in urine.

Gallah S, Decré D, Genel N, Arlet G.

J Clin Microbiol. 2014 Oct;52(10):3792-4. doi: 10.1128/JCM.01629-14. Epub 2014 Jul 30.


Molecular characterization of DHA-1-producing Klebsiella pneumoniae isolates collected during a 4-year period in an intensive care unit.

Compain F, Decré D, Fulgencio JP, Berraho S, Arlet G, Verdet C.

Diagn Microbiol Infect Dis. 2014 Oct;80(2):159-61. doi: 10.1016/j.diagmicrobio.2014.06.009. Epub 2014 Jun 23.


Extended-spectrum beta-lactamase-producing Escherichia coli infections in children: are community-acquired strains different from nosocomial strains?

Morgand M, Vimont S, Bleibtreu A, Boyd A, Thien HV, Zahar JR, Denamur E, Arlet G.

Int J Med Microbiol. 2014 Nov;304(8):970-6. doi: 10.1016/j.ijmm.2014.06.003. Epub 2014 Jun 19.


[News of antibiotic resistance among Gram-negative bacilli in Algeria].

Baba Ahmed-Kazi Tani Z, Arlet G.

Pathol Biol (Paris). 2014 Jun;62(3):169-78. doi: 10.1016/j.patbio.2014.01.005. Epub 2014 May 10. Review. French.


Complete nucleotide sequence of two multidrug-resistant IncR plasmids from Klebsiella pneumoniae.

Compain F, Frangeul L, Drieux L, Verdet C, Brisse S, Arlet G, Decré D.

Antimicrob Agents Chemother. 2014 Jul;58(7):4207-10. doi: 10.1128/AAC.02773-13. Epub 2014 Apr 21.


Targeting relaxase genes for classification of the predominant plasmids in Enterobacteriaceae.

Compain F, Poisson A, Le Hello S, Branger C, Weill FX, Arlet G, Decré D.

Int J Med Microbiol. 2014 May;304(3-4):236-42. doi: 10.1016/j.ijmm.2013.09.009. Epub 2013 Oct 19.


Evaluation of the βLacta test, a rapid test detecting resistance to third-generation cephalosporins in clinical strains of Enterobacteriaceae.

Renvoisé A, Decré D, Amarsy-Guerle R, Huang TD, Jost C, Podglajen I, Raskine L, Genel N, Bogaerts P, Jarlier V, Arlet G.

J Clin Microbiol. 2013 Dec;51(12):4012-7. doi: 10.1128/JCM.01936-13. Epub 2013 Sep 25.


In vivo selection of a complex mutant TEM (CMT) from an inhibitor-resistant TEM (IRT) during ceftazidime therapy.

Jacquier H, Marcadé G, Raffoux E, Dombret H, Woerther PL, Donay JL, Arlet G, Cambau E.

J Antimicrob Chemother. 2013 Dec;68(12):2792-6. doi: 10.1093/jac/dkt278. Epub 2013 Jul 16.


OXA-48 carbapenemase-producing Klebsiella pneumoniae isolated from Libyan patients.

Lafeuille E, Decré D, Mahjoub-Messai F, Bidet P, Arlet G, Bingen E.

Microb Drug Resist. 2013 Dec;19(6):491-7. doi: 10.1089/mdr.2012.0219. Epub 2013 Jun 29.


Molecular epidemiology of extended-spectrum beta-lactamase-producing Escherichia coli in Tunisia and characterization of their virulence factors and plasmid addiction systems.

Mnif B, Harhour H, Jdidi J, Mahjoubi F, Genel N, Arlet G, Hammami A.

BMC Microbiol. 2013 Jun 25;13:147. doi: 10.1186/1471-2180-13-147.


Emergence of NDM-1 in association with OXA-48 in Klebsiella pneumoniae from Tunisia.

Ben Nasr A, Decré D, Compain F, Genel N, Barguellil F, Arlet G.

Antimicrob Agents Chemother. 2013 Aug;57(8):4089-90. doi: 10.1128/AAC.00536-13. Epub 2013 Jun 10. No abstract available.


Molecular characterization of multidrug-resistant extended-spectrum β-lactamase-producing Enterobacteriaceae isolated in Antananarivo, Madagascar.

Rakotonirina HC, Garin B, Randrianirina F, Richard V, Talarmin A, Arlet G.

BMC Microbiol. 2013 Apr 17;13:85. doi: 10.1186/1471-2180-13-85.


[Rational approach of antibioprophylaxis: systematic review in ENT cancer surgery].

Garnier M, Blayau C, Fulgencio JP, Baujat B, Arlet G, Bonnet F, Quesnel C.

Ann Fr Anesth Reanim. 2013 May;32(5):315-24. doi: 10.1016/j.annfar.2013.02.010. Epub 2013 Apr 6. Review. French.


Characterization of extended-spectrum-beta-lactamase-producing Escherichia coli strains involved in maternal-fetal colonization: prevalence of E. coli ST131.

Birgy A, Mariani-Kurkdjian P, Bidet P, Doit C, Genel N, Courroux C, Arlet G, Bingen E.

J Clin Microbiol. 2013 Jun;51(6):1727-32. doi: 10.1128/JCM.03255-12. Epub 2013 Mar 20.


Molecular and epidemiological characterization of enterobacterial multidrug-resistant strains in Tlemcen Hospital (Algeria) (2008-2010).

Baba Ahmed-Kazi Tani Z, Decré D, Genel N, Boucherit-Otmani Z, Arlet G, Drissi M.

Microb Drug Resist. 2013 Jun;19(3):185-90. doi: 10.1089/mdr.2012.0161. Epub 2013 Jan 9.


CTX-M-producing Escherichia coli in Lithuania: associations between sites of infection, coresistance, and phylogenetic groups.

Giedraitienė A, Vitkauskienė A, Ašmonienė V, Plančiūnienė R, Simonytė S, Pavilonis A, Arlet G.

Medicina (Kaunas). 2013;49(9):393-8.


[Epidemiological overview of antibiotic resistance in France and worldwide].

Arlet G.

Rev Prat. 2012 Sep;62(7):962-7. French.


Antibiotic resistance plasmids spread among natural isolates of Escherichia coli in spite of CRISPR elements.

Touchon M, Charpentier S, Pognard D, Picard B, Arlet G, Rocha EP, Denamur E, Branger C.

Microbiology. 2012 Dec;158(12):2997-3004. doi: 10.1099/mic.0.060814-0.


Complete nucleotide sequence of the first KPC-2- and SHV-12-encoding IncX plasmid, pKpS90, from Klebsiella pneumoniae.

Kassis-Chikhani N, Frangeul L, Drieux L, Sengelin C, Jarlier V, Brisse S, Arlet G, Decré D.

Antimicrob Agents Chemother. 2013 Jan;57(1):618-20. doi: 10.1128/AAC.01712-12. Epub 2012 Oct 22.


Antibiotic resistance plasmids spread among natural isolates of Escherichia coli in spite of CRISPR elements.

Touchon M, Charpentier S, Pognard D, Picard B, Arlet G, Rocha EP, Denamur E, Branger C.

Microbiology. 2012 Dec;158(Pt 12):2997-3004. doi: 10.1099/mic.0.060814-0. Epub 2012 Oct 11.


The CTX-M-15-producing Escherichia coli clone O25b: H4-ST131 has high intestine colonization and urinary tract infection abilities.

Vimont S, Boyd A, Bleibtreu A, Bens M, Goujon JM, Garry L, Clermont O, Denamur E, Arlet G, Vandewalle A.

PLoS One. 2012;7(9):e46547. doi: 10.1371/journal.pone.0046547. Epub 2012 Sep 28.


Complete nucleotide sequence of the large conjugative pTC2 multireplicon plasmid encoding the VIM-1 metallo-β-lactamase.

Drieux L, Decré D, Frangeul L, Arlet G, Jarlier V, Sougakoff W.

J Antimicrob Chemother. 2013 Jan;68(1):97-100. doi: 10.1093/jac/dks367. Epub 2012 Sep 25.


Phylogenetic distribution of CTX-M- and non-extended-spectrum-β-lactamase-producing Escherichia coli isolates: group B2 isolates, except clone ST131, rarely produce CTX-M enzymes.

Brisse S, Diancourt L, Laouénan C, Vigan M, Caro V, Arlet G, Drieux L, Leflon-Guibout V, Mentré F, Jarlier V, Nicolas-Chanoine MH; Coli β Study Group.

J Clin Microbiol. 2012 Sep;50(9):2974-81. Epub 2012 Jul 3.

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