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Items: 1 to 50 of 126

1.

Classification of electrophysiological and morphological neuron types in the mouse visual cortex.

Gouwens NW, Sorensen SA, Berg J, Lee C, Jarsky T, Ting J, Sunkin SM, Feng D, Anastassiou CA, Barkan E, Bickley K, Blesie N, Braun T, Brouner K, Budzillo A, Caldejon S, Casper T, Castelli D, Chong P, Crichton K, Cuhaciyan C, Daigle TL, Dalley R, Dee N, Desta T, Ding SL, Dingman S, Doperalski A, Dotson N, Egdorf T, Fisher M, de Frates RA, Garren E, Garwood M, Gary A, Gaudreault N, Godfrey K, Gorham M, Gu H, Habel C, Hadley K, Harrington J, Harris JA, Henry A, Hill D, Josephsen S, Kebede S, Kim L, Kroll M, Lee B, Lemon T, Link KE, Liu X, Long B, Mann R, McGraw M, Mihalas S, Mukora A, Murphy GJ, Ng L, Ngo K, Nguyen TN, Nicovich PR, Oldre A, Park D, Parry S, Perkins J, Potekhina L, Reid D, Robertson M, Sandman D, Schroedter M, Slaughterbeck C, Soler-Llavina G, Sulc J, Szafer A, Tasic B, Taskin N, Teeter C, Thatra N, Tung H, Wakeman W, Williams G, Young R, Zhou Z, Farrell C, Peng H, Hawrylycz MJ, Lein E, Ng L, Arkhipov A, Bernard A, Phillips JW, Zeng H, Koch C.

Nat Neurosci. 2019 Jun 17. doi: 10.1038/s41593-019-0417-0. [Epub ahead of print]

PMID:
31209381
2.

[Thoracoscopic clipping of patent ductus arteriosus: position of surgery in the era of transcatheter procedures].

Arkhipov AN, Omelchenko AY, Zubritskiy AV, Khapaev TS, Soynov IA, Ivantsov SM, Pavlushin PM, Bogachev-Prokophiev AV, Karaskov AM.

Khirurgiia (Mosk). 2019;(2):5-12. doi: 10.17116/hirurgia20190215. Russian.

PMID:
30855584
3.

Outcomes of Double-patch and Warden Techniques in Patients with Supracardiac Partial Anomalous Pulmonary Venous Connection.

Zubritskiy A, Naberukhin Y, Arkhipov A, Gorbatykh Y, Khapaev T, Nichay N, Kulyabin Y, Bogachev-Prokophiev A, Karaskov A.

Heart Lung Circ. 2018 Dec 14. pii: S1443-9506(18)32007-9. doi: 10.1016/j.hlc.2018.11.020. [Epub ahead of print]

PMID:
30686643
4.

Visual physiology of the layer 4 cortical circuit in silico.

Arkhipov A, Gouwens NW, Billeh YN, Gratiy S, Iyer R, Wei Z, Xu Z, Abbasi-Asl R, Berg J, Buice M, Cain N, da Costa N, de Vries S, Denman D, Durand S, Feng D, Jarsky T, Lecoq J, Lee B, Li L, Mihalas S, Ocker GK, Olsen SR, Reid RC, Soler-Llavina G, Sorensen SA, Wang Q, Waters J, Scanziani M, Koch C.

PLoS Comput Biol. 2018 Nov 12;14(11):e1006535. doi: 10.1371/journal.pcbi.1006535. eCollection 2018 Nov.

5.

BioNet: A Python interface to NEURON for modeling large-scale networks.

Gratiy SL, Billeh YN, Dai K, Mitelut C, Feng D, Gouwens NW, Cain N, Koch C, Anastassiou CA, Arkhipov A.

PLoS One. 2018 Aug 2;13(8):e0201630. doi: 10.1371/journal.pone.0201630. eCollection 2018.

6.

Effect of p-tyrosol on hemorheological parameters and cerebral capillary network in young spontaneously hypertensive rats.

Plotnikov MB, Aliev OI, Sidekhmenova AV, Shamanaev AY, Anishchenko AM, Fomina TI, Plotnikova TM, Arkhipov AM.

Microvasc Res. 2018 Sep;119:91-97. doi: 10.1016/j.mvr.2018.04.005. Epub 2018 May 6.

PMID:
29742453
7.

[Robot-assisted atrial septal defect closure in adults: first experience in Russia].

Arkhipov AN, Bogachev-Prokofiev AV, Zubritskiy AV, Khapaev TS, Gorbatykh YN, Pavlushin PM, Karaskov AM.

Khirurgiia (Mosk). 2018;(2):4-20. doi: 10.17116/hirurgia201824-20. Russian.

PMID:
29460874
8.

Systematic generation of biophysically detailed models for diverse cortical neuron types.

Gouwens NW, Berg J, Feng D, Sorensen SA, Zeng H, Hawrylycz MJ, Koch C, Arkhipov A.

Nat Commun. 2018 Feb 19;9(1):710. doi: 10.1038/s41467-017-02718-3.

9.

Pentoxifylline treatment enhances antihypertensive activity of captopril through hemorheological improvement in spontaneously hypertensive rats during development of arterial hypertension.

Plotnikov MB, Shamanaev AY, Aliev OI, Sidekhmenova AV, Anishchenko AM, Arkhipov AM.

J Am Soc Hypertens. 2017 Nov;11(11):769-778. doi: 10.1016/j.jash.2017.09.007. Epub 2017 Sep 27.

PMID:
28989072
10.

Effects of pentoxifylline on hemodynamic, hemorheological, and microcirculatory parameters in young SHRs during arterial hypertension development.

Plotnikov MB, Aliev OI, Shamanaev AY, Sidekhmenova AV, Anfinogenova Y, Anishchenko AM, Fomina TI, Arkhipov AM.

Clin Exp Hypertens. 2017;39(6):570-578. doi: 10.1080/10641963.2017.1291662. Epub 2017 Jul 19.

PMID:
28722518
11.

Dihydroquercetin Improves Microvascularization and Microcirculation in the Brain Cortex of SHR Rats during the Development of Arterial Hypertension.

Plotnikov MB, Aliev OI, Sidekhmenova AV, Shamanaev AY, Anishchenko AM, Fomina TI, Chernysheva GA, Smol'yakova VI, Arkhipov AM.

Bull Exp Biol Med. 2017 May;163(1):57-60. doi: 10.1007/s10517-017-3737-7. Epub 2017 Jun 3.

PMID:
28577102
12.

[Persistent Shallot virus X infection correlates with transcriptional repression of plant cell RNA-dependent RNA polymerase and DCL proteins in plant roots].

Arkhipov AV, Solovyev AG, Vishnichenko VK.

Mol Biol (Mosk). 2017 Jan-Feb;51(1):126-130. doi: 10.7868/S0026898417010037. Russian.

13.

[Robot-assisted cystprostatectomy for urinary bladder cancer (the first experience)].

Yarmoshchuk SV, Kudryavtsev AS, Zeravin AA, Drobyazgin EA, Arkhipov AN.

Urologiia. 2016 Dec;(6):132-135. Russian.

PMID:
28248058
14.

Outcomes of perventricular off-pump versus conventional closure of ventricular septal defects: a prospective randomized study.

Voitov A, Omelchenko A, Gorbatykh Y, Zaitsev G, Arkhipov A, Soynov I, Bogachev-Prokophiev A, Karaskov A.

Eur J Cardiothorac Surg. 2017 May 1;51(5):980-986. doi: 10.1093/ejcts/ezx002.

PMID:
28199556
15.

EGFR oligomerization organizes kinase-active dimers into competent signalling platforms.

Needham SR, Roberts SK, Arkhipov A, Mysore VP, Tynan CJ, Zanetti-Domingues LC, Kim ET, Losasso V, Korovesis D, Hirsch M, Rolfe DJ, Clarke DT, Winn MD, Lajevardipour A, Clayton AH, Pike LJ, Perani M, Parker PJ, Shan Y, Shaw DE, Martin-Fernandez ML.

Nat Commun. 2016 Oct 31;7:13307. doi: 10.1038/ncomms13307.

16.

Inferring cortical function in the mouse visual system through large-scale systems neuroscience.

Hawrylycz M, Anastassiou C, Arkhipov A, Berg J, Buice M, Cain N, Gouwens NW, Gratiy S, Iyer R, Lee JH, Mihalas S, Mitelut C, Olsen S, Reid RC, Teeter C, de Vries S, Waters J, Zeng H, Koch C; MindScope.

Proc Natl Acad Sci U S A. 2016 Jul 5;113(27):7337-44. doi: 10.1073/pnas.1512901113.

17.

Unexpected Reactivity of Trifluoromethyl Diazomethane (CF3CHN2): Electrophilicity of the Terminal N-Atom.

Arkhipov AV, Arkhipov VV, Cossy J, Kovtunenko VO, Mykhailiuk PK.

Org Lett. 2016 Jul 15;18(14):3406-9. doi: 10.1021/acs.orglett.6b01565. Epub 2016 Jun 28.

PMID:
27351064
18.

Inter-cultivar variation in soil-to-plant transfer of radiocaesium and radiostrontium in Brassica oleracea.

Penrose B, Johnson Née Payne KA, Arkhipov A, Maksimenko A, Gaschak S, Meacham MC, Crout NJM, White PJ, Beresford NA, Broadley MR.

J Environ Radioact. 2016 May;155-156:112-121. doi: 10.1016/j.jenvrad.2016.02.020. Epub 2016 Mar 3.

19.

[The Influence of Threatening Stimuli on the Component P200 in Patients with Paranoid Schizophrenia].

Strelets VB, Arkhipov AY.

Fiziol Cheloveka. 2015 Sep-Oct;41(5):66-73. Russian.

PMID:
26601410
20.

The Warden procedure can be successfully performed using minimally invasive cardiac surgery without aortic clamping.

Zubritskiy A, Arkhipov A, Khapaev T, Naberukhin Y, Omelchenko A, Gorbatykh Y, Bogachev-Prokophiev A, Karaskov A.

Interact Cardiovasc Thorac Surg. 2016 Feb;22(2):225-7. doi: 10.1093/icvts/ivv312. Epub 2015 Nov 5.

PMID:
26541958
21.

[Neurophysiological Features of Perception of Emotional Stimuli in Health and in Patients with Paranoid Schizophrenia].

Arkhipov AY, Strelets VB.

Fiziol Cheloveka. 2015 Jul-Aug;41(4):31-6. Russian.

PMID:
26485786
22.

Membrane interaction of bound ligands contributes to the negative binding cooperativity of the EGF receptor.

Arkhipov A, Shan Y, Kim ET, Shaw DE.

PLoS Comput Biol. 2014 Jul 24;10(7):e1003742. doi: 10.1371/journal.pcbi.1003742. eCollection 2014 Jul.

23.

Perventricular device closure of ventricular septal defect using a video-assisted thoracoscopic approach.

Omelchenko AY, Zaitsev GS, Gorbatykh YN, Khapaev TS, Malakhova OY, Arkhipov AN, Karaskov AM.

Ann Thorac Surg. 2014 Jul;98(1):350-2. doi: 10.1016/j.athoracsur.2013.11.063.

PMID:
24996728
24.

Surgical off-pump closure of perimembranous ventricular septal defects.

Omelchenko AY, Zhuang Z, Schreiber C, Gorbatykh YN, Arkhipov AN, Malakhova OY, Zaitsev GS.

Asian Cardiovasc Thorac Ann. 2014 Jan;22(1):31-5. doi: 10.1177/0218492312468114. Epub 2013 Jul 11.

PMID:
24585640
25.

[Experimental assessment of biodegradable polyglycolic and polylactic acid polymers for medical use].

Kulakov AA, Grigor'ian AS, Arkhipov AV.

Stomatologiia (Mosk). 2013;92(5):4-8. Russian.

PMID:
24300698
26.

Accumulation of changes in the genome of shallot virus X persisting in vegetatively reproduced plants.

Arkhipov AV, Gushchin VA, Vishnichenko VK, Solovyev AG.

Dokl Biochem Biophys. 2013 Sep;452(1):237-40. doi: 10.1134/S1607672913050049. Epub 2013 Oct 23. No abstract available.

PMID:
24150581
27.

Her2 activation mechanism reflects evolutionary preservation of asymmetric ectodomain dimers in the human EGFR family.

Arkhipov A, Shan Y, Kim ET, Dror RO, Shaw DE.

Elife. 2013 Jul 16;2:e00708. doi: 10.7554/eLife.00708.

28.

[The flagship of the national naval medical science (on the 80th anniversary of establishment of the 1st Central Research Institute of the Defense Ministry of Russian Federation)].

Chumakov VV, Arkhipov AV, Borodavko VK, Vasil'kov AM, Groshilin SM, Ivanov AO, Smurov AV.

Voen Med Zh. 2013 Feb;334(2):84-8. Russian.

PMID:
23808207
29.

Transitions to catalytically inactive conformations in EGFR kinase.

Shan Y, Arkhipov A, Kim ET, Pan AC, Shaw DE.

Proc Natl Acad Sci U S A. 2013 Apr 30;110(18):7270-5. doi: 10.1073/pnas.1220843110. Epub 2013 Apr 1.

30.

[Implant-retained restoration in esthetically important zone].

Arkhipov AV.

Stomatologiia (Mosk). 2013;92(1):63-5. Russian.

PMID:
23528406
31.

[New type titan alloy with shape memory for use in dental implantology].

Grigor'ian AS, Filonov MR, Arkhipov AV, Selezneva II, Zhukova IuS.

Stomatologiia (Mosk). 2013;92(1):4-8. Russian.

PMID:
23528392
32.

Architecture and membrane interactions of the EGF receptor.

Arkhipov A, Shan Y, Das R, Endres NF, Eastwood MP, Wemmer DE, Kuriyan J, Shaw DE.

Cell. 2013 Jan 31;152(3):557-69. doi: 10.1016/j.cell.2012.12.030.

33.

Conformational coupling across the plasma membrane in activation of the EGF receptor.

Endres NF, Das R, Smith AW, Arkhipov A, Kovacs E, Huang Y, Pelton JG, Shan Y, Shaw DE, Wemmer DE, Groves JT, Kuriyan J.

Cell. 2013 Jan 31;152(3):543-56. doi: 10.1016/j.cell.2012.12.032.

34.

[Types of mechanical processing of dental implants surface and their impact on osseous integration].

Grigor'ian AS, Arkhipov AV.

Stomatologiia (Mosk). 2012;91(5):40-2. Review. Russian. No abstract available.

PMID:
23281574
35.

[Measures for prevention of maxillary sinus mucosa perforation by sinus-lifting procedure].

Arkhipov AV.

Stomatologiia (Mosk). 2012;91(6):45-7. Russian.

PMID:
23268218
36.

[Perspectives of use of polytetrafluoroethylene with nanostructured surface in dentistry].

Grigor'ian AS, Shtanskiĭ DV, Selezneva II, Arkhipov AV.

Stomatologiia (Mosk). 2012;91(6):4-7. Russian.

PMID:
23268208
37.

[Dental implantation by low-density bone].

Kulakov AA, Arkhipov AV.

Stomatologiia (Mosk). 2012;91(5):31-3. Russian.

PMID:
23268182
38.

Oncogenic mutations counteract intrinsic disorder in the EGFR kinase and promote receptor dimerization.

Shan Y, Eastwood MP, Zhang X, Kim ET, Arkhipov A, Dror RO, Jumper J, Kuriyan J, Shaw DE.

Cell. 2012 May 11;149(4):860-70. doi: 10.1016/j.cell.2012.02.063.

39.

Nucleotide diversity and gene expression of Catalase and Glutathione peroxidase in irradiated Scots pine (Pinus sylvestris L.) from the Chernobyl exclusion zone.

Vornam B, Arkhipov A, Finkeldey R.

J Environ Radioact. 2012 Apr;106:20-6. doi: 10.1016/j.jenvrad.2011.11.001. Epub 2011 Nov 29.

PMID:
22304996
40.

[Impact of surface modifications of dental implants on their integration potential].

Kulakov AA, Grogor'ian AS, Arkhipov AV.

Stomatologiia (Mosk). 2012;91(6):75-7. Review. Russian. No abstract available.

PMID:
23980270
41.

[Dynamics of numbers of commercial fish in early ontogenesis in different areas of the Central-Eastern Atlantic].

Arkhipov AG, Mamedov AA, Simonova TA, Tenitskaia IA.

Ontogenez. 2011 May-Jun;42(3):165-71. Russian.

PMID:
21786648
42.

[Implants integration into bone tissue: theoretical aspects of the problem].

Kulakov AA, Grigor'ian AS, Arkhipov AV.

Stomatologiia (Mosk). 2010;89(5):4-8. Russian.

PMID:
21191328
43.

Squeezing protein shells: how continuum elastic models, molecular dynamics simulations, and experiments coalesce at the nanoscale.

Roos WH, Gibbons MM, Arkhipov A, Uetrecht C, Watts NR, Wingfield PT, Steven AC, Heck AJ, Schulten K, Klug WS, Wuite GJ.

Biophys J. 2010 Aug 9;99(4):1175-81. doi: 10.1016/j.bpj.2010.05.033.

44.

Membrane-bending mechanism of amphiphysin N-BAR domains.

Arkhipov A, Yin Y, Schulten K.

Biophys J. 2009 Nov 18;97(10):2727-35. doi: 10.1016/j.bpj.2009.08.051.

45.

Elucidating the mechanism behind irreversible deformation of viral capsids.

Arkhipov A, Roos WH, Wuite GJ, Schulten K.

Biophys J. 2009 Oct 7;97(7):2061-9. doi: 10.1016/j.bpj.2009.07.039.

46.

Simulations of membrane tubulation by lattices of amphiphysin N-BAR domains.

Yin Y, Arkhipov A, Schulten K.

Structure. 2009 Jun 10;17(6):882-92. doi: 10.1016/j.str.2009.03.016.

47.

Modelling of a large-scale urban contamination situation and remediation alternatives.

Thiessen KM, Arkhipov A, Batandjieva B, Charnock TW, Gaschak S, Golikov V, Hwang WT, Tomás J, Zlobenko B.

J Environ Radioact. 2009 May;100(5):413-21. doi: 10.1016/j.jenvrad.2009.02.001. Epub 2009 Mar 26.

PMID:
19324477
48.

Limits for reduction of effective focal volume in multiple-beam light microscopy.

Arkhipov A, Schulten K.

Opt Express. 2009 Feb 16;17(4):2861-70.

49.

Using VMD: an introductory tutorial.

Hsin J, Arkhipov A, Yin Y, Stone JE, Schulten K.

Curr Protoc Bioinformatics. 2008 Dec;Chapter 5:Unit 5.7. doi: 10.1002/0471250953.bi0507s24.

50.

Four-scale description of membrane sculpting by BAR domains.

Arkhipov A, Yin Y, Schulten K.

Biophys J. 2008 Sep 15;95(6):2806-21. doi: 10.1529/biophysj.108.132563. Epub 2008 May 30.

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