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Many Ways to Build a Polyp.

Arendt D.

Trends Genet. 2019 Oct 16. pii: S0168-9525(19)30187-8. doi: 10.1016/j.tig.2019.09.003. [Epub ahead of print]


Age at diagnosis of Type 2 diabetes in Germany: a nationwide analysis based on claims data from 69 million people.

Jacobs E, Rathmann W, Tönnies T, Arendt D, Marchowez M, Veith L, Kuss O, Brinks R, Hoyer A.

Diabet Med. 2019 Aug 7. doi: 10.1111/dme.14100. [Epub ahead of print]


A Behavioral Assay to Study Effects of Retinoid Pharmacology on Nervous System Development in a Marine Annelid.

Handberg-Thorsager M, Ulman V, Tomançak P, Arendt D, Schubert M.

Methods Mol Biol. 2019;2019:193-207. doi: 10.1007/978-1-4939-9585-1_14.


Evolution of neuronal types and families.

Arendt D, Bertucci PY, Achim K, Musser JM.

Curr Opin Neurobiol. 2019 Jun;56:144-152. doi: 10.1016/j.conb.2019.01.022. Epub 2019 Mar 1. Review.


Orexin/hypocretin receptor modulation of anxiolytic and antidepressive responses during social stress and decision-making: Potential for therapy.

Summers CH, Yaeger JDW, Staton CD, Arendt DH, Summers TR.

Brain Res. 2018 Dec 24. pii: S0006-8993(18)30662-0. doi: 10.1016/j.brainres.2018.12.036. [Epub ahead of print] Review.


Whole-head recording of chemosensory activity in the marine annelid Platynereis dumerilii.

Chartier TF, Deschamps J, Dürichen W, Jékely G, Arendt D.

Open Biol. 2018 Oct 31;8(10). pii: 180139. doi: 10.1098/rsob.180139.


Hox genes and body segmentation.

Arendt D.

Science. 2018 Sep 28;361(6409):1310-1311. doi: 10.1126/science.aav0692. No abstract available.


Evolution of the bilaterian mouth and anus.

Nielsen C, Brunet T, Arendt D.

Nat Ecol Evol. 2018 Sep;2(9):1358-1376. doi: 10.1038/s41559-018-0641-0. Epub 2018 Aug 22. Review.


Animal Evolution: Convergent Nerve Cords?

Arendt D.

Curr Biol. 2018 Mar 5;28(5):R225-R227. doi: 10.1016/j.cub.2018.01.056.


The ancestral retinoic acid receptor was a low-affinity sensor triggering neuronal differentiation.

Handberg-Thorsager M, Gutierrez-Mazariegos J, Arold ST, Kumar Nadendla E, Bertucci PY, Germain P, Tomançak P, Pierzchalski K, Jones JW, Albalat R, Kane MA, Bourguet W, Laudet V, Arendt D, Schubert M.

Sci Adv. 2018 Feb 21;4(2):eaao1261. doi: 10.1126/sciadv.aao1261. eCollection 2018 Feb.


Whole-Body Single-Cell Sequencing Reveals Transcriptional Domains in the Annelid Larval Body.

Achim K, Eling N, Vergara HM, Bertucci PY, Musser J, Vopalensky P, Brunet T, Collier P, Benes V, Marioni JC, Arendt D.

Mol Biol Evol. 2018 May 1;35(5):1047-1062. doi: 10.1093/molbev/msx336.


The enigmatic xenopsins.

Arendt D.

Elife. 2017 Oct 19;6. pii: e31781. doi: 10.7554/eLife.31781.


Learning and CRF-Induced Indecision during Escape and Submission in Rainbow Trout during Socially Aggressive Interactions in the Stress-Alternatives Model.

Summers TR, Summers TL, Carpenter RE, Smith JP, Young SL, Meyerink B, Orr TZ, Arendt DH, Summers CH.

Front Neurosci. 2017 Sep 15;11:515. doi: 10.3389/fnins.2017.00515. eCollection 2017.


Editorial - Development and evolution of sensory cells and organs.

Schlosser G, Musser J, Arendt D.

Dev Biol. 2017 Nov 1;431(1):1-2. doi: 10.1016/j.ydbio.2017.09.007. Epub 2017 Sep 8. No abstract available.


Loss and gain of cone types in vertebrate ciliary photoreceptor evolution.

Musser JM, Arendt D.

Dev Biol. 2017 Nov 1;431(1):26-35. doi: 10.1016/j.ydbio.2017.08.038. Epub 2017 Sep 4. Review.


How Single-Cell Genomics Is Changing Evolutionary and Developmental Biology.

Marioni JC, Arendt D.

Annu Rev Cell Dev Biol. 2017 Oct 6;33:537-553. doi: 10.1146/annurev-cellbio-100616-060818. Epub 2017 Aug 16. Review.


Whole-organism cellular gene-expression atlas reveals conserved cell types in the ventral nerve cord of Platynereis dumerilii.

Vergara HM, Bertucci PY, Hantz P, Tosches MA, Achim K, Vopalensky P, Arendt D.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5878-5885. doi: 10.1073/pnas.1610602114.


Editorial overview: Developmental mechanisms, patterning and evolution: New models for genetics and development - diversity at last.

Arendt D, Extavour C.

Curr Opin Genet Dev. 2016 Aug;39:iv-vi. doi: 10.1016/j.gde.2016.10.003. Epub 2016 Oct 26. No abstract available.


The evolutionary origin of bilaterian smooth and striated myocytes.

Brunet T, Fischer AH, Steinmetz PR, Lauri A, Bertucci P, Arendt D.

Elife. 2016 Dec 1;5. pii: e19607. doi: 10.7554/eLife.19607.


The origin and evolution of cell types.

Arendt D, Musser JM, Baker CVH, Bergman A, Cepko C, Erwin DH, Pavlicev M, Schlosser G, Widder S, Laubichler MD, Wagner GP.

Nat Rev Genet. 2016 Dec;17(12):744-757. doi: 10.1038/nrg.2016.127. Epub 2016 Nov 7. Review.


Animal Evolution: The Hard Problem of Cartilage Origins.

Brunet T, Arendt D.

Curr Biol. 2016 Jul 25;26(14):R685-8. doi: 10.1016/j.cub.2016.05.062.


Neurotrophin, p75, and Trk Signaling Module in the Developing Nervous System of the Marine Annelid Platynereis dumerilii.

Lauri A, Bertucci P, Arendt D.

Biomed Res Int. 2016;2016:2456062. doi: 10.1155/2016/2456062. Epub 2016 Mar 16.


Old knowledge and new technologies allow rapid development of model organisms.

Cook CE, Chenevert J, Larsson TA, Arendt D, Houliston E, Lénárt P.

Mol Biol Cell. 2016 Mar 15;27(6):882-7. doi: 10.1091/mbc.E15-10-0682. Review.


The mid-developmental transition and the evolution of animal body plans.

Levin M, Anavy L, Cole AG, Winter E, Mostov N, Khair S, Senderovich N, Kovalev E, Silver DH, Feder M, Fernandez-Valverde SL, Nakanishi N, Simmons D, Simakov O, Larsson T, Liu SY, Jerafi-Vider A, Yaniv K, Ryan JF, Martindale MQ, Rink JC, Arendt D, Degnan SM, Degnan BM, Hashimshony T, Yanai I.

Nature. 2016 Mar 31;531(7596):637-641. doi: 10.1038/nature16994. Epub 2016 Feb 17.


From nerve net to nerve ring, nerve cord and brain--evolution of the nervous system.

Arendt D, Tosches MA, Marlow H.

Nat Rev Neurosci. 2016 Jan;17(1):61-72. doi: 10.1038/nrn.2015.15. Review.


From damage response to action potentials: early evolution of neural and contractile modules in stem eukaryotes.

Brunet T, Arendt D.

Philos Trans R Soc Lond B Biol Sci. 2016 Jan 5;371(1685):20150043. doi: 10.1098/rstb.2015.0043. Review.


Gastric pouches and the mucociliary sole: setting the stage for nervous system evolution.

Arendt D, Benito-Gutierrez E, Brunet T, Marlow H.

Philos Trans R Soc Lond B Biol Sci. 2015 Dec 19;370(1684). pii: 20150286. doi: 10.1098/rstb.2015.0286. Review.


Quantifying Preferences and Responsiveness of Marine Zooplankton to Changing Environmental Conditions using Microfluidics.

Ramanathan N, Simakov O, Merten CA, Arendt D.

PLoS One. 2015 Oct 30;10(10):e0140553. doi: 10.1371/journal.pone.0140553. eCollection 2015.


Pharmacological depletion of serotonin in the basolateral amygdala complex reduces anxiety and disrupts fear conditioning.

Johnson PL, Molosh A, Fitz SD, Arendt D, Deehan GA, Federici LM, Bernabe C, Engleman EA, Rodd ZA, Lowry CA, Shekhar A.

Pharmacol Biochem Behav. 2015 Nov;138:174-9. doi: 10.1016/j.pbb.2015.09.021.


Did the notochord evolve from an ancient axial muscle? The axochord hypothesis.

Brunet T, Lauri A, Arendt D.

Bioessays. 2015 Aug;37(8):836-50. doi: 10.1002/bies.201500027. Epub 2015 Jul 14. Review.


Nuance and behavioral cogency: How the Visible Burrow System inspired the Stress-Alternatives Model and conceptualization of the continuum of anxiety.

Robertson JM, Prince MA, Achua JK, Carpenter RE, Arendt DH, Smith JP, Summers TL, Summers TR, Summers CH.

Physiol Behav. 2015 Jul 1;146:86-97. Review.


Effects of low seawater pH on the marine polychaete Platynereis dumerilii.

Wäge J, Hardege JD, Larsson TA, Simakov O, Chapman EC, Arendt D, Rotchell JM.

Mar Pollut Bull. 2015 Jun 15;95(1):166-72. doi: 10.1016/j.marpolbul.2015.04.027. Epub 2015 Apr 22.


High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin.

Achim K, Pettit JB, Saraiva LR, Gavriouchkina D, Larsson T, Arendt D, Marioni JC.

Nat Biotechnol. 2015 May;33(5):503-9. doi: 10.1038/nbt.3209. Epub 2015 Apr 13.


Melatonin signaling controls circadian swimming behavior in marine zooplankton.

Tosches MA, Bucher D, Vopalensky P, Arendt D.

Cell. 2014 Sep 25;159(1):46-57. doi: 10.1016/j.cell.2014.07.042.


Social learning and amygdala disruptions in Nf1 mice are rescued by blocking p21-activated kinase.

Molosh AI, Johnson PL, Spence JP, Arendt D, Federici LM, Bernabe C, Janasik SP, Segu ZM, Khanna R, Goswami C, Zhu W, Park SJ, Li L, Mechref YS, Clapp DW, Shekhar A.

Nat Neurosci. 2014 Nov;17(11):1583-90. doi: 10.1038/nn.3822. Epub 2014 Sep 21.


Development of the annelid axochord: insights into notochord evolution.

Lauri A, Brunet T, Handberg-Thorsager M, Fischer AH, Simakov O, Steinmetz PR, Tomer R, Keller PJ, Arendt D.

Science. 2014 Sep 12;345(6202):1365-8. doi: 10.1126/science.1253396.


Evolution: ctenophore genomes and the origin of neurons.

Marlow H, Arendt D.

Curr Biol. 2014 Aug 18;24(16):R757-61. doi: 10.1016/j.cub.2014.06.057.


Structural evolution of cell types by step-wise assembly of cellular modules.

Achim K, Arendt D.

Curr Opin Genet Dev. 2014 Aug;27:102-8. doi: 10.1016/j.gde.2014.05.001. Epub 2014 Jul 5. Review.


Illuminating the base of the annelid tree using transcriptomics.

Weigert A, Helm C, Meyer M, Nickel B, Arendt D, Hausdorf B, Santos SR, Halanych KM, Purschke G, Bleidorn C, Struck TH.

Mol Biol Evol. 2014 Jun;31(6):1391-401. doi: 10.1093/molbev/msu080. Epub 2014 Feb 23.


Anxiolytic function of the orexin 2/hypocretin A receptor in the basolateral amygdala.

Arendt DH, Hassell J, Li H, Achua JK, Guarnieri DJ, Dileone RJ, Ronan PJ, Summers CH.

Psychoneuroendocrinology. 2014 Feb;40:17-26. doi: 10.1016/j.psyneuen.2013.10.010. Epub 2013 Oct 30.


Larval body patterning and apical organs are conserved in animal evolution.

Marlow H, Tosches MA, Tomer R, Steinmetz PR, Lauri A, Larsson T, Arendt D.

BMC Biol. 2014 Jan 29;12:7. doi: 10.1186/1741-7007-12-7.


The bilaterian forebrain: an evolutionary chimaera.

Tosches MA, Arendt D.

Curr Opin Neurobiol. 2013 Dec;23(6):1080-9. doi: 10.1016/j.conb.2013.09.005. Epub 2013 Sep 27. Review.


Evolution of clitellate phaosomes from rhabdomeric photoreceptor cells of polychaetes - a study in the leech Helobdella robusta (Annelida, Sedentaria, Clitellata).

Döring C, Gosda J, Tessmar-Raible K, Hausen H, Arendt D, Purschke G.

Front Zool. 2013 Sep 5;10(1):52. doi: 10.1186/1742-9994-10-52.


Methods for generating year-round access to amphioxus in the laboratory.

Benito-Gutiérrez E, Weber H, Bryant DV, Arendt D.

PLoS One. 2013 Aug 26;8(8):e71599. doi: 10.1371/journal.pone.0071599. eCollection 2013.


Somatic and visceral nervous systems - an ancient duality.

Bertucci P, Arendt D.

BMC Biol. 2013 Apr 30;11:54. doi: 10.1186/1741-7007-11-54.


Mesoteloblast-like mesodermal stem cells in the polychaete annelid Platynereis dumerilii (Nereididae).

Fischer AH, Arendt D.

J Exp Zool B Mol Dev Evol. 2013 Mar;320(2):94-104. doi: 10.1002/jez.b.22486. Epub 2013 Feb 13.


Depressive behavior and activation of the orexin/hypocretin system.

Arendt DH, Ronan PJ, Oliver KD, Callahan LB, Summers TR, Summers CH.

Behav Neurosci. 2013 Feb;127(1):86-94. doi: 10.1037/a0031442.


Insights into bilaterian evolution from three spiralian genomes.

Simakov O, Marletaz F, Cho SJ, Edsinger-Gonzales E, Havlak P, Hellsten U, Kuo DH, Larsson T, Lv J, Arendt D, Savage R, Osoegawa K, de Jong P, Grimwood J, Chapman JA, Shapiro H, Aerts A, Otillar RP, Terry AY, Boore JL, Grigoriev IV, Lindberg DR, Seaver EC, Weisblat DA, Putnam NH, Rokhsar DS.

Nature. 2013 Jan 24;493(7433):526-31. doi: 10.1038/nature11696. Epub 2012 Dec 19.


Linking micro- and macro-evolution at the cell type level: a view from the lophotrochozoan Platynereis dumerilii.

Simakov O, Larsson TA, Arendt D.

Brief Funct Genomics. 2013 Sep;12(5):430-9. doi: 10.1093/bfgp/els049. Epub 2012 Nov 20. Review.


Molecular analysis of the amphioxus frontal eye unravels the evolutionary origin of the retina and pigment cells of the vertebrate eye.

Vopalensky P, Pergner J, Liegertova M, Benito-Gutierrez E, Arendt D, Kozmik Z.

Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15383-8. Epub 2012 Sep 4.

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