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Items: 22

1.

Genetic diversity analysis of cultivated and wild grapevine (Vitis vinifera L.) accessions around the Mediterranean basin and Central Asia.

Riaz S, De Lorenzis G, Velasco D, Koehmstedt A, Maghradze D, Bobokashvili Z, Musayev M, Zdunic G, Laucou V, Andrew Walker M, Failla O, Preece JE, Aradhya M, Arroyo-Garcia R.

BMC Plant Biol. 2018 Jun 27;18(1):137. doi: 10.1186/s12870-018-1351-0.

2.

Genetic and ecological insights into glacial refugia of walnut (Juglans regia L.).

Aradhya M, Velasco D, Ibrahimov Z, Toktoraliev B, Maghradze D, Musayev M, Bobokashvili Z, Preece JE.

PLoS One. 2017 Oct 12;12(10):e0185974. doi: 10.1371/journal.pone.0185974. eCollection 2017.

3.

Patterns of genomic and phenomic diversity in wine and table grapes.

Migicovsky Z, Sawler J, Gardner KM, Aradhya MK, Prins BH, Schwaninger HR, Bustamante CD, Buckler ES, Zhong GY, Brown PJ, Myles S.

Hortic Res. 2017 Aug 2;4:17035. doi: 10.1038/hortres.2017.35. eCollection 2017.

4.

Genotyping by Sequencing for SNP-Based Linkage Analysis and Identification of QTLs Linked to Fruit Quality Traits in Japanese Plum (Prunus salicina Lindl.).

Salazar JA, Pacheco I, Shinya P, Zapata P, Silva C, Aradhya M, Velasco D, Ruiz D, Martínez-Gómez P, Infante R.

Front Plant Sci. 2017 Apr 11;8:476. doi: 10.3389/fpls.2017.00476. eCollection 2017.

5.

Evolutionary Genomics of Peach and Almond Domestication.

Velasco D, Hough J, Aradhya M, Ross-Ibarra J.

G3 (Bethesda). 2016 Dec 7;6(12):3985-3993. doi: 10.1534/g3.116.032672.

6.

Genome-wide identification of microRNAs in pomegranate (Punica granatum L.) by high-throughput sequencing.

Saminathan T, Bodunrin A, Singh NV, Devarajan R, Nimmakayala P, Jeff M, Aradhya M, Reddy UK.

BMC Plant Biol. 2016 May 26;16(1):122. doi: 10.1186/s12870-016-0807-3.

7.

The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols.

Martínez-García PJ, Crepeau MW, Puiu D, Gonzalez-Ibeas D, Whalen J, Stevens KA, Paul R, Butterfield TS, Britton MT, Reagan RL, Chakraborty S, Walawage SL, Vasquez-Gross HA, Cardeno C, Famula RA, Pratt K, Kuruganti S, Aradhya MK, Leslie CA, Dandekar AM, Salzberg SL, Wegrzyn JL, Langley CH, Neale DB.

Plant J. 2016 Sep;87(5):507-32. doi: 10.1111/tpj.13207. Epub 2016 Jul 18.

8.

Synteny analysis in Rosids with a walnut physical map reveals slow genome evolution in long-lived woody perennials.

Luo MC, You FM, Li P, Wang JR, Zhu T, Dandekar AM, Leslie CA, Aradhya M, McGuire PE, Dvorak J.

BMC Genomics. 2015 Sep 17;16:707. doi: 10.1186/s12864-015-1906-5.

9.

Multiple loss-of-function 5-O-glucosyltransferase alleles revealed in Vitis vinifera, but not in other Vitis species.

Yang Y, Labate JA, Liang Z, Cousins P, Prins B, Preece JE, Aradhya M, Zhong GY.

Theor Appl Genet. 2014 Nov;127(11):2433-51. doi: 10.1007/s00122-014-2388-6. Epub 2014 Sep 11.

PMID:
25208644
10.

A modern ampelography: a genetic basis for leaf shape and venation patterning in grape.

Chitwood DH, Ranjan A, Martinez CC, Headland LR, Thiem T, Kumar R, Covington MF, Hatcher T, Naylor DT, Zimmerman S, Downs N, Raymundo N, Buckler ES, Maloof JN, Aradhya M, Prins B, Li L, Myles S, Sinha NR.

Plant Physiol. 2014 Jan;164(1):259-72. doi: 10.1104/pp.113.229708. Epub 2013 Nov 27.

11.

Genomics assisted ancestry deconvolution in grape.

Sawler J, Reisch B, Aradhya MK, Prins B, Zhong GY, Schwaninger H, Simon C, Buckler E, Myles S.

PLoS One. 2013 Nov 11;8(11):e80791. doi: 10.1371/journal.pone.0080791. eCollection 2013.

12.

Vitis phylogenomics: hybridization intensities from a SNP array outperform genotype calls.

Miller AJ, Matasci N, Schwaninger H, Aradhya MK, Prins B, Zhong GY, Simon C, Buckler ES, Myles S.

PLoS One. 2013 Nov 13;8(11):e78680. doi: 10.1371/journal.pone.0078680. eCollection 2013. Erratum in: PLoS One. 2014;9(1). doi:10.1371/annotation/283e5eba-a65d-42a3-a430-6ca0be86147c.

13.

Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms.

You FM, Deal KR, Wang J, Britton MT, Fass JN, Lin D, Dandekar AM, Leslie CA, Aradhya M, Luo MC, Dvorak J.

BMC Genomics. 2012 Jul 31;13:354. doi: 10.1186/1471-2164-13-354.

14.

Characterizing the walnut genome through analyses of BAC end sequences.

Wu J, Gu YQ, Hu Y, You FM, Dandekar AM, Leslie CA, Aradhya M, Dvorak J, Luo MC.

Plant Mol Biol. 2012 Jan;78(1-2):95-107. doi: 10.1007/s11103-011-9849-y. Epub 2011 Nov 19.

PMID:
22101470
15.

Genetic variation in walnuts (Juglans regia and J. sigillata; Juglandaceae): Species distinctions, human impacts, and the conservation of agrobiodiversity in Yunnan, China.

Gunn BF, Aradhya M, Salick JM, Miller AJ, Yongping Y, Lin L, Xian H.

Am J Bot. 2010 Apr;97(4):660-71. doi: 10.3732/ajb.0900114. Epub 2010 Mar 11.

16.

Genetic structure and domestication history of the grape.

Myles S, Boyko AR, Owens CL, Brown PJ, Grassi F, Aradhya MK, Prins B, Reynolds A, Chia JM, Ware D, Bustamante CD, Buckler ES.

Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3530-5. doi: 10.1073/pnas.1009363108. Epub 2011 Jan 18.

17.

Genetic structure and differentiation in cultivated fig (Ficus carica L.).

Aradhya MK, Stover E, Velasco D, Koehmstedt A.

Genetica. 2010 Jun;138(6):681-94. doi: 10.1007/s10709-010-9442-3. Epub 2010 Mar 10.

18.

Preparedness for management of medical emergencies among dentists in Udupi and Mangalore, India.

Gupta T, Aradhya MR, Nagaraj A.

J Contemp Dent Pract. 2008 Jul 1;9(5):92-9.

PMID:
18633474
19.

Accumulation of bioactive compounds during growth and development of mango ginger (Curcuma amada Roxb.) rhizomes.

Policegoudra RS, Kumar MH, Aradhya MS.

J Agric Food Chem. 2007 Oct 3;55(20):8105-11. Epub 2007 Aug 23.

PMID:
17715894
20.

Multiple origins of cultivated grapevine (Vitis vinifera L. ssp. sativa) based on chloroplast DNA polymorphisms.

Arroyo-García R, Ruiz-García L, Bolling L, Ocete R, López MA, Arnold C, Ergul A, Söylemezoğlu G, Uzun HI, Cabello F, Ibáñez J, Aradhya MK, Atanassov A, Atanassov I, Balint S, Cenis JL, Costantini L, Goris-Lavets S, Grando MS, Klein BY, McGovern PE, Merdinoglu D, Pejic I, Pelsy F, Primikirios N, Risovannaya V, Roubelakis-Angelakis KA, Snoussi H, Sotiri P, Tamhankar S, This P, Troshin L, Malpica JM, Lefort F, Martinez-Zapater JM.

Mol Ecol. 2006 Oct;15(12):3707-14.

PMID:
17032268
21.

Genetic structure and differentiation in cultivated grape, Vitis vinifera L.

Aradhya MK, Dangl GS, Prins BH, Boursiquot JM, Walker MA, Meredith CP, Simon CJ.

Genet Res. 2003 Jun;81(3):179-92.

PMID:
12929909
22.

Simple sequence repeats in watermelon (Citrullus lanatus (Thunb.) Matsum. & Nakai).

Jarret RL, Merrick LC, Holms T, Evans J, Aradhya MK.

Genome. 1997 Aug;40(4):433-41.

PMID:
9276932

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