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Items: 1 to 50 of 75

1.

Arogenate dehydratases can modulate the levels of phenylacetic acid in Arabidopsis.

Aoi Y, Oikawa A, Sasaki R, Huang J, Hayashi KI, Kasahara H.

Biochem Biophys Res Commun. 2020 Jan 21. pii: S0006-291X(20)30104-2. doi: 10.1016/j.bbrc.2020.01.041. [Epub ahead of print]

PMID:
31980164
2.

GH3 auxin-amido synthetases alter the ratio of indole-3-acetic acid and phenylacetic acid in Arabidopsis.

Aoi Y, Tanaka K, Cook SD, Hayashi KI, Kasahara H.

Plant Cell Physiol. 2019 Dec 6. pii: pcz223. doi: 10.1093/pcp/pcz223. [Epub ahead of print]

PMID:
31808940
3.

LEDGF and HDGF2 relieve the nucleosome-induced barrier to transcription in differentiated cells.

LeRoy G, Oksuz O, Descostes N, Aoi Y, Ganai RA, Kara HO, Yu JR, Lee CH, Stafford J, Shilatifard A, Reinberg D.

Sci Adv. 2019 Oct 2;5(10):eaay3068. doi: 10.1126/sciadv.aay3068. eCollection 2019 Oct.

4.

Integrated biological-physical process for biogas purification effluent treatment.

Noorain R, Kindaichi T, Ozaki N, Aoi Y, Ohashi A.

J Environ Sci (China). 2019 Sep;83:110-122. doi: 10.1016/j.jes.2019.02.028. Epub 2019 Apr 8.

PMID:
31221374
5.

Targeting Processive Transcription Elongation via SEC Disruption for MYC-Induced Cancer Therapy.

Liang K, Smith ER, Aoi Y, Stoltz KL, Katagi H, Woodfin AR, Rendleman EJ, Marshall SA, Murray DC, Wang L, Ozark PA, Mishra RK, Hashizume R, Schiltz GE, Shilatifard A.

Cell. 2018 Oct 18;175(3):766-779.e17. doi: 10.1016/j.cell.2018.09.027.

6.

Promoter bivalency favors an open chromatin architecture in embryonic stem cells.

Mas G, Blanco E, Ballaré C, Sansó M, Spill YG, Hu D, Aoi Y, Le Dily F, Shilatifard A, Marti-Renom MA, Di Croce L.

Nat Genet. 2018 Oct;50(10):1452-1462. doi: 10.1038/s41588-018-0218-5. Epub 2018 Sep 17.

PMID:
30224650
7.

Effects of Salts on the Activity and Growth of "Candidatus Scalindua sp.", a Marine Anammox Bacterium.

Mojiri A, Nishimoto K, Awata T, Aoi Y, Ozaki N, Ohashi A, Kindaichi T.

Microbes Environ. 2018 Sep 29;33(3):336-339. doi: 10.1264/jsme2.ME18068. Epub 2018 Aug 24.

8.

Specificities and Efficiencies of Primers Targeting Candidatus Phylum Saccharibacteria in Activated Sludge.

Takenaka R, Aoi Y, Ozaki N, Ohashi A, Kindaichi T.

Materials (Basel). 2018 Jul 3;11(7). pii: E1129. doi: 10.3390/ma11071129.

9.

Application of the filter plate microbial trap (FPMT), for cultivating thermophilic bacteria from thermal springs in Barguzin area, eastern Baikal, Russia.

Jung D, Seo EY, Owen JS, Aoi Y, Yong S, Lavrentyeva EV, Ahn TS.

Biosci Biotechnol Biochem. 2018 Sep;82(9):1624-1632. doi: 10.1080/09168451.2018.1482194. Epub 2018 Jun 8.

PMID:
29882485
10.

Draft Genome Sequence of Mn(II)-Oxidizing Pseudomonas resinovorans Strain MO-1.

Matsushita S, Nakano M, Aoi Y, Kindaichi T, Ozaki N, Ohashi A.

Genome Announc. 2018 Mar 15;6(11). pii: e00088-18. doi: 10.1128/genomeA.00088-18.

11.

Production of biogenic manganese oxides coupled with methane oxidation in a bioreactor for removing metals from wastewater.

Matsushita S, Komizo D, Cao LTT, Aoi Y, Kindaichi T, Ozaki N, Imachi H, Ohashi A.

Water Res. 2018 Mar 1;130:224-233. doi: 10.1016/j.watres.2017.11.063. Epub 2017 Dec 1.

PMID:
29227871
12.

Dominant Candidatus Accumulibacter phosphatis Enriched in Response to Phosphate Concentrations in EBPR Process.

Nurmiyanto A, Kodera H, Kindaichi T, Ozaki N, Aoi Y, Ohashi A.

Microbes Environ. 2017 Sep 27;32(3):260-267. doi: 10.1264/jsme2.ME17020. Epub 2017 Sep 9.

13.

PAF1 regulation of promoter-proximal pause release via enhancer activation.

Chen FX, Xie P, Collings CK, Cao K, Aoi Y, Marshall SA, Rendleman EJ, Ugarenko M, Ozark PA, Zhang A, Shiekhattar R, Smith ER, Zhang MQ, Shilatifard A.

Science. 2017 Sep 22;357(6357):1294-1298. doi: 10.1126/science.aan3269. Epub 2017 Aug 31.

14.

Synthetic Posttranslational Modifications: Chemical Catalyst-Driven Regioselective Histone Acylation of Native Chromatin.

Amamoto Y, Aoi Y, Nagashima N, Suto H, Yoshidome D, Arimura Y, Osakabe A, Kato D, Kurumizaka H, Kawashima SA, Yamatsugu K, Kanai M.

J Am Chem Soc. 2017 Jun 7;139(22):7568-7576. doi: 10.1021/jacs.7b02138. Epub 2017 May 23.

PMID:
28534629
15.

pH-gradient ion-exchange microbial cell chromatography as a simple method for microbial separation.

Aoi Y, Kaneko Y, Tsuneda S.

J Biosci Bioeng. 2017 Apr;123(4):431-436. doi: 10.1016/j.jbiosc.2016.10.012. Epub 2016 Dec 4.

PMID:
27923729
16.

In Situ Cultivation Allows for Recovery of Bacterial Types Competitive in Their Natural Environment.

Jung D, Aoi Y, Epstein SS.

Microbes Environ. 2016 Dec 23;31(4):456-459. doi: 10.1264/jsme2.ME16079. Epub 2016 Sep 29.

17.

Potent, Reversible, and Specific Chemical Inhibitors of Eukaryotic Ribosome Biogenesis.

Kawashima SA, Chen Z, Aoi Y, Patgiri A, Kobayashi Y, Nurse P, Kapoor TM.

Cell. 2016 Oct 6;167(2):512-524.e14. doi: 10.1016/j.cell.2016.08.070. Epub 2016 Sep 22.

18.

Biological oxidation of Mn(II) coupled with nitrification for removal and recovery of minor metals by downflow hanging sponge reactor.

Cao LT, Kodera H, Abe K, Imachi H, Aoi Y, Kindaichi T, Ozaki T, Ohashi A.

Water Res. 2015 Jan 1;68:545-53.

PMID:
25462760
19.

Isolation of sublineage I Nitrospira by a novel cultivation strategy.

Fujitani H, Ushiki N, Tsuneda S, Aoi Y.

Environ Microbiol. 2014 Oct;16(10):3030-40. doi: 10.1111/1462-2920.12248. Epub 2013 Sep 24.

PMID:
25312601
20.

Optimization of the analogue-sensitive Cdc2/Cdk1 mutant by in vivo selection eliminates physiological limitations to its use in cell cycle analysis.

Aoi Y, Kawashima SA, Simanis V, Yamamoto M, Sato M.

Open Biol. 2014 Jul;4(7). pii: 140063. doi: 10.1098/rsob.140063.

21.

Isolation of microorganisms using sub-micrometer constrictions.

Tandogan N, Abadian PN, Epstein S, Aoi Y, Goluch ED.

PLoS One. 2014 Jun 30;9(6):e101429. doi: 10.1371/journal.pone.0101429. eCollection 2014.

22.

Dissecting the first and the second meiotic divisions using a marker-less drug-hypersensitive fission yeast.

Aoi Y, Sato M, Sutani T, Shirahige K, Kapoor TM, Kawashima SA.

Cell Cycle. 2014;13(8):1327-34. doi: 10.4161/cc.28294. Epub 2014 Mar 3.

23.

Sorption of Eu(III) on granite: EPMA, LA-ICP-MS, batch and modeling studies.

Fukushi K, Hasegawa Y, Maeda K, Aoi Y, Tamura A, Arai S, Yamamoto Y, Aosai D, Mizuno T.

Environ Sci Technol. 2013 Nov 19;47(22):12811-8. doi: 10.1021/es402676n. Epub 2013 Oct 30.

PMID:
24171426
24.

Isolation of Nitrospira belonging to sublineage II from a wastewater treatment plant.

Ushiki N, Fujitani H, Aoi Y, Tsuneda S.

Microbes Environ. 2013;28(3):346-53. Epub 2013 Sep 4.

25.

Challenges for complex microbial ecosystems: combination of experimental approaches with mathematical modeling.

Haruta S, Yoshida T, Aoi Y, Kaneko K, Futamata H.

Microbes Environ. 2013;28(3):285-94. Epub 2013 Aug 30. Review.

26.
27.

Cuf2 boosts the transcription of APC/C activator Fzr1 to terminate the meiotic division cycle.

Aoi Y, Arai K, Miyamoto M, Katsuta Y, Yamashita A, Sato M, Yamamoto M.

EMBO Rep. 2013 Jun;14(6):553-60. doi: 10.1038/embor.2013.52. Epub 2013 Apr 30.

28.

The involvement of DNA and histone methylation in the repression of IL-1β-induced MCP-1 production by hypoxia.

Aoi Y, Nakahama K, Morita I, Safronova O.

Biochem Biophys Res Commun. 2011 Oct 14;414(1):252-8. doi: 10.1016/j.bbrc.2011.09.066. Epub 2011 Sep 17.

PMID:
21951854
29.

Evaluation of the Pentax-AWS(®) and the Macintosh laryngoscope in difficult intubation: a manikin study.

Kariya T, Inagawa G, Nakamura K, Fujimoto J, Aoi Y, Morita S, Goto T.

Acta Anaesthesiol Scand. 2011 Feb;55(2):223-7. doi: 10.1111/j.1399-6576.2010.02363.x.

PMID:
21226865
30.

Airway scope laryngoscopy under manual inline stabilization and cervical collar immobilization: a crossover in vivo cinefluoroscopic study.

Aoi Y, Inagawa G, Hashimoto K, Tashima H, Tsuboi S, Takahata T, Nakamura K, Goto T.

J Trauma. 2011 Jul;71(1):32-6. doi: 10.1097/TA.0b013e3181e75873.

PMID:
20805775
31.

Airway scope versus macintosh laryngoscope in patients with simulated limitation of neck movements.

Aoi Y, Inagawa G, Nakamura K, Sato H, Kariya T, Goto T.

J Trauma. 2010 Oct;69(4):838-42. doi: 10.1097/TA.0b013e3181c4529e.

PMID:
20179653
32.

Improved development of mouse and human embryos using a tilting embryo culture system.

Matsuura K, Hayashi N, Kuroda Y, Takiue C, Hirata R, Takenami M, Aoi Y, Yoshioka N, Habara T, Mukaida T, Naruse K.

Reprod Biomed Online. 2010 Mar;20(3):358-64. doi: 10.1016/j.rbmo.2009.12.002. Epub 2010 Jan 25.

33.
34.

Microbial community structure in autotrophic nitrifying granules characterized by experimental and simulation analyses.

Matsumoto S, Katoku M, Saeki G, Terada A, Aoi Y, Tsuneda S, Picioreanu C, van Loosdrecht MC.

Environ Microbiol. 2010 Jan;12(1):192-206. doi: 10.1111/j.1462-2920.2009.02060.x. Epub 2009 Oct 2.

PMID:
19799623
35.

Hollow-fiber membrane chamber as a device for in situ environmental cultivation.

Aoi Y, Kinoshita T, Hata T, Ohta H, Obokata H, Tsuneda S.

Appl Environ Microbiol. 2009 Jun;75(11):3826-33. doi: 10.1128/AEM.02542-08. Epub 2009 Mar 27.

36.

Roles of nitric oxide (NO) and NO synthases in healing of dextran sulfate sodium-induced rat colitis.

Aoi Y, Terashima S, Ogura M, Nishio H, Kato S, Takeuchi K.

J Physiol Pharmacol. 2008 Jun;59(2):315-36.

37.

Microchamber arrays for the identification of individual cells exposed to an X-ray microbeam.

Kuchimaru T, Sato F, Aoi Y, Fujita T, Ikeda T, Shimizu K, Kato Y, Iida T.

Radiat Environ Biophys. 2008 Nov;47(4):535-40. doi: 10.1007/s00411-008-0180-1. Epub 2008 Jun 27.

PMID:
18584192
38.

Increased susceptibility of small intestine to NSAID-provoked ulceration in rats with adjuvant-induced arthritis: involvement of enhanced expression of TLR4.

Kato S, Ito Y, Nishio H, Aoi Y, Amagase K, Takeuchi K.

Life Sci. 2007 Sep 29;81(16):1309-16. Epub 2007 Sep 14.

PMID:
17920637
39.

Experimental and simulation analysis of community structure of nitrifying bacteria in a membrane-aerated biofilm.

Matsumoto S, Terada A, Aoi Y, Tsuneda S, Alpkvist E, Picioreanu C, van Loosdrecht MC.

Water Sci Technol. 2007;55(8-9):283-90.

PMID:
17546997
40.

Diversity of nitrite reductase genes in "Candidatus Accumulibacter phosphatis"-dominated cultures enriched by flow-cytometric sorting.

Miyauchi R, Oki K, Aoi Y, Tsuneda S.

Appl Environ Microbiol. 2007 Aug;73(16):5331-7. Epub 2007 May 18.

41.

Aggravation by selective COX-1 and COX-2 inhibitors of dextran sulfate sodium (DSS)-induced colon lesions in rats.

Okayama M, Hayashi S, Aoi Y, Nishio H, Kato S, Takeuchi K.

Dig Dis Sci. 2007 Sep;52(9):2095-103. Epub 2007 Apr 12.

PMID:
17429720
42.

Healing impairment effect of cyclooxygenase inhibitors on dextran sulfate sodium-induced colitis in rats.

Tsubouchi R, Hayashi S, Aoi Y, Nishio H, Terashima S, Kato S, Takeuchi K.

Digestion. 2006;74(2):91-100. Epub 2006 Dec 1.

PMID:
17143008
43.
44.
46.

In situ identification of microorganisms in biofilm communities.

Aoi Y.

J Biosci Bioeng. 2002;94(6):552-6.

PMID:
16233349
47.

Microbial ecology of nitrifying bacteria in wastewater treatment process examined by fluorescence in situ hybridization.

Aoi Y, Miyoshi T, Okamoto T, Tsuneda S, Hirata A, Kitayama A, Nagamune T.

J Biosci Bioeng. 2000;90(3):234-40.

PMID:
16232850
49.

Single-stage autotrophic nitrogen-removal process using a composite matrix immobilizing nitrifying and sulfur-denitrifying bacteria.

Aoi Y, Shiramasa Y, Kakimoto E, Tsuneda S, Hirata A, Nagamune T.

Appl Microbiol Biotechnol. 2005 Jul;68(1):124-30. Epub 2005 Feb 4.

PMID:
15692803
50.

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