Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 78

1.

Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola.

Morais do Amaral A, Antoniw J, Rudd JJ, Hammond-Kosack KE.

PLoS One. 2012;7(12):e49904. doi: 10.1371/journal.pone.0049904. Epub 2012 Dec 7.

2.

The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis.

Brown NA, Antoniw J, Hammond-Kosack KE.

PLoS One. 2012;7(4):e33731. doi: 10.1371/journal.pone.0033731. Epub 2012 Apr 6.

3.

OmniMapFree: a unified tool to visualise and explore sequenced genomes.

Antoniw J, Beacham AM, Baldwin TK, Urban M, Rudd JJ, Hammond-Kosack KE.

BMC Bioinformatics. 2011 Nov 15;12:447. doi: 10.1186/1471-2105-12-447.

4.

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis.

Goodwin SB, M'barek SB, Dhillon B, Wittenberg AH, Crane CF, Hane JK, Foster AJ, Van der Lee TA, Grimwood J, Aerts A, Antoniw J, Bailey A, Bluhm B, Bowler J, Bristow J, van der Burgt A, Canto-Canché B, Churchill AC, Conde-Ferràez L, Cools HJ, Coutinho PM, Csukai M, Dehal P, De Wit P, Donzelli B, van de Geest HC, van Ham RC, Hammond-Kosack KE, Henrissat B, Kilian A, Kobayashi AK, Koopmann E, Kourmpetis Y, Kuzniar A, Lindquist E, Lombard V, Maliepaard C, Martins N, Mehrabi R, Nap JP, Ponomarenko A, Rudd JJ, Salamov A, Schmutz J, Schouten HJ, Shapiro H, Stergiopoulos I, Torriani SF, Tu H, de Vries RP, Waalwijk C, Ware SB, Wiebenga A, Zwiers LH, Oliver RP, Grigoriev IV, Kema GH.

PLoS Genet. 2011 Jun;7(6):e1002070. doi: 10.1371/journal.pgen.1002070. Epub 2011 Jun 9.

5.

A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum.

Baldwin TK, Gaffoor I, Antoniw J, Andries C, Guenther J, Urban M, Hallen-Adams HE, Pitkin J, Hammond-Kosack KE, Trail F.

Mol Plant Microbe Interact. 2010 Aug;23(8):1083-96. doi: 10.1094/MPMI-23-8-1083.

6.

Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing.

Yan F, Zhang H, Adams MJ, Yang J, Peng J, Antoniw JF, Zhou Y, Chen J.

Arch Virol. 2010 Jun;155(6):935-40. doi: 10.1007/s00705-010-0670-8. Epub 2010 Apr 16.

PMID:
20396917
7.

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.

Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M, Henrissat B, Houterman PM, Kang S, Shim WB, Woloshuk C, Xie X, Xu JR, Antoniw J, Baker SE, Bluhm BH, Breakspear A, Brown DW, Butchko RA, Chapman S, Coulson R, Coutinho PM, Danchin EG, Diener A, Gale LR, Gardiner DM, Goff S, Hammond-Kosack KE, Hilburn K, Hua-Van A, Jonkers W, Kazan K, Kodira CD, Koehrsen M, Kumar L, Lee YH, Li L, Manners JM, Miranda-Saavedra D, Mukherjee M, Park G, Park J, Park SY, Proctor RH, Regev A, Ruiz-Roldan MC, Sain D, Sakthikumar S, Sykes S, Schwartz DC, Turgeon BG, Wapinski I, Yoder O, Young S, Zeng Q, Zhou S, Galagan J, Cuomo CA, Kistler HC, Rep M.

Nature. 2010 Mar 18;464(7287):367-73. doi: 10.1038/nature08850.

8.

Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats.

Rudd JJ, Antoniw J, Marshall R, Motteram J, Fraaije B, Hammond-Kosack K.

Fungal Genet Biol. 2010 Jan;47(1):19-32. doi: 10.1016/j.fgb.2009.10.009.

PMID:
19887112
9.

Virgaviridae: a new family of rod-shaped plant viruses.

Adams MJ, Antoniw JF, Kreuze J.

Arch Virol. 2009;154(12):1967-72. doi: 10.1007/s00705-009-0506-6. Epub 2009 Oct 28.

PMID:
19862474
10.

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.

Cuomo CA, Güldener U, Xu JR, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE, Rep M, Adam G, Antoniw J, Baldwin T, Calvo S, Chang YL, Decaprio D, Gale LR, Gnerre S, Goswami RS, Hammond-Kosack K, Harris LJ, Hilburn K, Kennell JC, Kroken S, Magnuson JK, Mannhaupt G, Mauceli E, Mewes HW, Mitterbauer R, Muehlbauer G, Münsterkötter M, Nelson D, O'donnell K, Ouellet T, Qi W, Quesneville H, Roncero MI, Seong KY, Tetko IV, Urban M, Waalwijk C, Ward TJ, Yao J, Birren BW, Kistler HC.

Science. 2007 Sep 7;317(5843):1400-2.

11.

Transcriptome profiling of the response of Mycosphaerella graminicola isolates to an azole fungicide using cDNA microarrays.

Cools HJ, Fraaije BA, Bean TP, Antoniw J, Lucas JA.

Mol Plant Pathol. 2007 Sep;8(5):639-51. doi: 10.1111/j.1364-3703.2007.00411.x.

PMID:
20507527
12.

Characterization of structural and signaling molecules by human valve interstitial cells and comparison to human mesenchymal stem cells.

Latif N, Sarathchandra P, Thomas PS, Antoniw J, Batten P, Chester AH, Taylor PM, Yacoub MH.

J Heart Valve Dis. 2007 Jan;16(1):56-66.

PMID:
17315384
13.

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host.

Keon J, Antoniw J, Carzaniga R, Deller S, Ward JL, Baker JM, Beale MH, Hammond-Kosack K, Rudd JJ.

Mol Plant Microbe Interact. 2007 Feb;20(2):178-93.

14.

Human mesenchymal stem cells induce T cell anergy and downregulate T cell allo-responses via the TH2 pathway: relevance to tissue engineering human heart valves.

Batten P, Sarathchandra P, Antoniw JW, Tay SS, Lowdell MW, Taylor PM, Yacoub MH.

Tissue Eng. 2006 Aug;12(8):2263-73.

PMID:
16968166
15.

A combinatorial pattern discovery approach for the prediction of membrane dipping (re-entrant) loops.

Lasso G, Antoniw JF, Mullins JG.

Bioinformatics. 2006 Jul 15;22(14):e290-7.

PMID:
16873484
16.

Characterization of molecules mediating cell-cell communication in human cardiac valve interstitial cells.

Latif N, Sarathchandra P, Taylor PM, Antoniw J, Brand N, Yacoub MH.

Cell Biochem Biophys. 2006;45(3):255-64.

PMID:
16845172
17.

Genome and EST analyses and expression of a gene family with putative functions in insect chemoreception.

Zhou JJ, Kan Y, Antoniw J, Pickett JA, Field LM.

Chem Senses. 2006 Jun;31(5):453-65. Epub 2006 Mar 31.

PMID:
16581978
18.

DPVweb: a comprehensive database of plant and fungal virus genes and genomes.

Adams MJ, Antoniw JF.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D382-5.

19.

Ascorbic acid deficiency activates cell death and disease resistance responses in Arabidopsis.

Pavet V, Olmos E, Kiddle G, Mowla S, Kumar S, Antoniw J, Alvarez ME, Foyer CH.

Plant Physiol. 2005 Nov;139(3):1291-303. Epub 2005 Oct 21.

20.

Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling.

Keon J, Rudd JJ, Antoniw J, Skinner W, Hargreaves J, Hammond-Kosack K.

Mol Plant Pathol. 2005 Sep 1;6(5):527-40. doi: 10.1111/j.1364-3703.2005.00304.x.

PMID:
20565677
21.

Molecules mediating cell-ECM and cell-cell communication in human heart valves.

Latif N, Sarathchandra P, Taylor PM, Antoniw J, Yacoub MH.

Cell Biochem Biophys. 2005;43(2):275-87.

PMID:
16049351
22.

Overview and analysis of the polyprotein cleavage sites in the family Potyviridae.

Adams MJ, Antoniw JF, Beaudoin F.

Mol Plant Pathol. 2005 Jul 1;6(4):471-87. doi: 10.1111/j.1364-3703.2005.00296.x.

PMID:
20565672
23.

Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici).

Keon J, Antoniw J, Rudd J, Skinner W, Hargreaves J, Hammond-Kosack K.

Fungal Genet Biol. 2005 May;42(5):376-89.

PMID:
15809003
24.

Localization and pattern of expression of extracellular matrix components in human heart valves.

Latif N, Sarathchandra P, Taylor PM, Antoniw J, Yacoub MH.

J Heart Valve Dis. 2005 Mar;14(2):218-27.

PMID:
15792183
25.

Molecular criteria for genus and species discrimination within the family Potyviridae.

Adams MJ, Antoniw JF, Fauquet CM.

Arch Virol. 2005 Mar;150(3):459-79. Epub 2004 Dec 10.

PMID:
15592889
26.

A new potyvirus from tuberose ( Polianthes tuberosa) in China.

Lin L, Zheng HY, Chen J, Chen JP, Zhang QY, Zhao MF, Antoniw JF, Adams MJ.

Arch Virol. 2004 Jun;149(6):1107-16. Epub 2004 Mar 1.

PMID:
15168198
27.

The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation.

Adams MJ, Antoniw JF, Bar-Joseph M, Brunt AA, Candresse T, Foster GD, Martelli GP, Milne RG, Zavriev SK, Fauquet CM.

Arch Virol. 2004 May;149(5):1045-60. Epub 2004 May 2. Erratum in: Arch Virol. 2004 Aug;149(8):1672.

PMID:
15098118
28.

Detection and classification of allexiviruses from garlic in China.

Chen J, Zheng HY, Antoniw JF, Adams MJ, Chen JP, Lin L.

Arch Virol. 2004 Mar;149(3):435-45. Epub 2003 Nov 13.

PMID:
14991435
29.

A virus related to soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates.

Chen J, Zheng HY, Lin L, Adams MJ, Antoniw JF, Zhao MF, Shang YF, Chen JP.

Arch Virol. 2004 Feb;149(2):349-63. Epub 2003 Aug 18.

PMID:
14745600
30.

Codon usage bias amongst plant viruses.

Adams MJ, Antoniw JF.

Arch Virol. 2004 Jan;149(1):113-35. Epub 2003 Sep 22.

PMID:
14689279
31.

Occurrence and sequences of Lily mottle virus and Lily symptomless virus in plants grown from imported bulbs in Zhejiang province, China.

Zheng HY, Chen J, Zhao MF, Lin L, Chen JP, Antoniw JF, Adams MJ.

Arch Virol. 2003 Dec;148(12):2419-28. Epub 2003 Sep 19.

PMID:
14648295
32.

Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling.

Pastori GM, Kiddle G, Antoniw J, Bernard S, Veljovic-Jovanovic S, Verrier PJ, Noctor G, Foyer CH.

Plant Cell. 2003 Apr;15(4):939-51.

33.

Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana.

Kiddle G, Pastori GM, Bernard S, Pignocchi C, Antoniw J, Verrier PJ, Foyer CH.

Antioxid Redox Signal. 2003 Feb;5(1):23-32.

PMID:
12626114
34.

TMCompare: transmembrane region sequence and structure.

Togawa RC, Antoniw JF, Mullins JG.

Bioinformatics. 2001 Dec;17(12):1238-9.

PMID:
11751238
35.
36.

Molecular analysis of barley yellow mosaic virus isolates from China.

Chen J, Shi N, Cheng Y, Diao A, Wilson TM, Antoniw JF, Adams MJ.

Virus Res. 1999 Oct;64(1):13-21.

PMID:
10500279
37.

Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus furovirus.

Diao A, Chen J, Gitton F, Antoniw JF, Mullins J, Hall AM, Adams MJ.

Virology. 1999 Sep 1;261(2):331-9.

38.

Complete sequence and genome properties of Chinese wheat mosaic virus, a new furovirus from China.

Diao A, Chen J, Ye R, Zheng T, Yu S, Antoniw JF, Adams MJ.

J Gen Virol. 1999 May;80 ( Pt 5):1141-5.

PMID:
10355760
39.

Molecular modelling of the mechanism of bile acid transport by the hepatocyte canalicular ecto-ATPase (CAM-105).

Mullins JG, Antoniw J, Gilani SS, Murphy GM, Wilkinson ML.

Biochem Soc Trans. 1998 May;26(2):S123. No abstract available.

PMID:
9649798
40.

Isoforms of 11beta-hydroxysteroid dehydrogenase in human granulosa-lutein cells.

Michael AE, Evagelatou M, Norgate DP, Clarke RJ, Antoniw JW, Stedman BA, Brennan A, Welsby R, Bujalska I, Stewart PM, Cooke BA.

Mol Cell Endocrinol. 1997 Sep 19;132(1-2):43-52.

PMID:
9324045
41.

Complete RNA1 sequences of two UK isolates of barley mild mosaic virus: a wild-type fungus-transmissible isolate and a non-fungus-transmissible derivative.

Peerenboom E, Cartwright EJ, Foulds I, Adams MJ, Stratford R, Rosner A, Steinbiss HH, Antoniw JF.

Virus Res. 1997 Aug;50(2):175-83.

PMID:
9282782
42.

A large duplication in the 3'-untranslated region of a subpopulation of RNA2 of the UK-M isolate of barley mild mosaic bymovirus.

Peerenboom E, Jacobi V, Cartwright EJ, Adams MJ, Steinbiss HH, Antoniw JF.

Virus Res. 1997 Jan;47(1):1-6.

PMID:
9037731
43.

Single-strand conformation polymorphism analysis of RT-PCR products of UK isolates of barley yellow mosaic virus.

Shi NN, Chen J, Wilson TM, Macfarlane SA, Antoniw JF, Adams MJ.

Virus Res. 1996 Sep;44(1):1-9.

PMID:
8873408
44.

Sequence analysis of wheat and oat furovirus capsid protein genes suggests that oat golden stripe virus is a strain of soil-borne wheat mosaic virus.

Chen J, Shi N, Michael T, Wilson A, Antoniw JF, MacFarlane SA, Adams MJ.

Virus Res. 1996 Apr;41(2):179-83.

PMID:
8738177
45.
46.
47.

Different Effects of Lipopolysaccharide on Plasminogen Activator Inhibitor-1 Production in Aortic Media in Vivo and in Culture.

van Leeuwen RT, Quax PH, Tippins JR, Antoniw JW, Andreotti F, Maseri A, Kluft C, Sperti G.

J Thromb Thrombolysis. 1996;3(3):215-223.

PMID:
10613985
48.

An analysis of differential display shows a strong bias towards high copy number mRNAs.

Bertioli DJ, Schlichter UH, Adams MJ, Burrows PR, Steinbiss HH, Antoniw JF.

Nucleic Acids Res. 1995 Nov 11;23(21):4520-3. No abstract available.

49.

Molecular characterisation of UK isolates of barley yellow mosaic bymovirus.

Shi NN, Zhu M, Chen J, Stratford R, Wilson TM, Antoniw JF, Foulds IJ, MacFarlane SA, Adams MJ.

Virus Res. 1995 Oct;38(2-3):193-204.

PMID:
8578858

Supplemental Content

Loading ...
Support Center