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Items: 1 to 20 of 78

1.

Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola.

Morais do Amaral A, Antoniw J, Rudd JJ, Hammond-Kosack KE.

PLoS One. 2012;7(12):e49904. doi: 10.1371/journal.pone.0049904.

2.

The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis.

Brown NA, Antoniw J, Hammond-Kosack KE.

PLoS One. 2012;7(4):e33731. doi: 10.1371/journal.pone.0033731.

3.

OmniMapFree: a unified tool to visualise and explore sequenced genomes.

Antoniw J, Beacham AM, Baldwin TK, Urban M, Rudd JJ, Hammond-Kosack KE.

BMC Bioinformatics. 2011 Nov 15;12:447. doi: 10.1186/1471-2105-12-447.

4.

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis.

Goodwin SB, M'barek SB, Dhillon B, Wittenberg AH, Crane CF, Hane JK, Foster AJ, Van der Lee TA, Grimwood J, Aerts A, Antoniw J, Bailey A, Bluhm B, Bowler J, Bristow J, van der Burgt A, Canto-Canché B, Churchill AC, Conde-Ferràez L, Cools HJ, Coutinho PM, Csukai M, Dehal P, De Wit P, Donzelli B, van de Geest HC, van Ham RC, Hammond-Kosack KE, Henrissat B, Kilian A, Kobayashi AK, Koopmann E, Kourmpetis Y, Kuzniar A, Lindquist E, Lombard V, Maliepaard C, Martins N, Mehrabi R, Nap JP, Ponomarenko A, Rudd JJ, Salamov A, Schmutz J, Schouten HJ, Shapiro H, Stergiopoulos I, Torriani SF, Tu H, de Vries RP, Waalwijk C, Ware SB, Wiebenga A, Zwiers LH, Oliver RP, Grigoriev IV, Kema GH.

PLoS Genet. 2011 Jun;7(6):e1002070. doi: 10.1371/journal.pgen.1002070.

5.

A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum.

Baldwin TK, Gaffoor I, Antoniw J, Andries C, Guenther J, Urban M, Hallen-Adams HE, Pitkin J, Hammond-Kosack KE, Trail F.

Mol Plant Microbe Interact. 2010 Aug;23(8):1083-96. doi: 10.1094/MPMI-23-8-1083.

6.

Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing.

Yan F, Zhang H, Adams MJ, Yang J, Peng J, Antoniw JF, Zhou Y, Chen J.

Arch Virol. 2010 Jun;155(6):935-40. doi: 10.1007/s00705-010-0670-8.

PMID:
20396917
7.

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.

Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M, Henrissat B, Houterman PM, Kang S, Shim WB, Woloshuk C, Xie X, Xu JR, Antoniw J, Baker SE, Bluhm BH, Breakspear A, Brown DW, Butchko RA, Chapman S, Coulson R, Coutinho PM, Danchin EG, Diener A, Gale LR, Gardiner DM, Goff S, Hammond-Kosack KE, Hilburn K, Hua-Van A, Jonkers W, Kazan K, Kodira CD, Koehrsen M, Kumar L, Lee YH, Li L, Manners JM, Miranda-Saavedra D, Mukherjee M, Park G, Park J, Park SY, Proctor RH, Regev A, Ruiz-Roldan MC, Sain D, Sakthikumar S, Sykes S, Schwartz DC, Turgeon BG, Wapinski I, Yoder O, Young S, Zeng Q, Zhou S, Galagan J, Cuomo CA, Kistler HC, Rep M.

Nature. 2010 Mar 18;464(7287):367-73. doi: 10.1038/nature08850.

8.

Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats.

Rudd JJ, Antoniw J, Marshall R, Motteram J, Fraaije B, Hammond-Kosack K.

Fungal Genet Biol. 2010 Jan;47(1):19-32. doi: 10.1016/j.fgb.2009.10.009.

PMID:
19887112
9.

Virgaviridae: a new family of rod-shaped plant viruses.

Adams MJ, Antoniw JF, Kreuze J.

Arch Virol. 2009;154(12):1967-72. doi: 10.1007/s00705-009-0506-6.

PMID:
19862474
10.

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.

Cuomo CA, Güldener U, Xu JR, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE, Rep M, Adam G, Antoniw J, Baldwin T, Calvo S, Chang YL, Decaprio D, Gale LR, Gnerre S, Goswami RS, Hammond-Kosack K, Harris LJ, Hilburn K, Kennell JC, Kroken S, Magnuson JK, Mannhaupt G, Mauceli E, Mewes HW, Mitterbauer R, Muehlbauer G, Münsterkötter M, Nelson D, O'donnell K, Ouellet T, Qi W, Quesneville H, Roncero MI, Seong KY, Tetko IV, Urban M, Waalwijk C, Ward TJ, Yao J, Birren BW, Kistler HC.

Science. 2007 Sep 7;317(5843):1400-2.

11.

Transcriptome profiling of the response of Mycosphaerella graminicola isolates to an azole fungicide using cDNA microarrays.

Cools HJ, Fraaije BA, Bean TP, Antoniw J, Lucas JA.

Mol Plant Pathol. 2007 Sep;8(5):639-51. doi: 10.1111/j.1364-3703.2007.00411.x.

PMID:
20507527
12.

Characterization of structural and signaling molecules by human valve interstitial cells and comparison to human mesenchymal stem cells.

Latif N, Sarathchandra P, Thomas PS, Antoniw J, Batten P, Chester AH, Taylor PM, Yacoub MH.

J Heart Valve Dis. 2007 Jan;16(1):56-66.

PMID:
17315384
13.

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host.

Keon J, Antoniw J, Carzaniga R, Deller S, Ward JL, Baker JM, Beale MH, Hammond-Kosack K, Rudd JJ.

Mol Plant Microbe Interact. 2007 Feb;20(2):178-93.

14.

Human mesenchymal stem cells induce T cell anergy and downregulate T cell allo-responses via the TH2 pathway: relevance to tissue engineering human heart valves.

Batten P, Sarathchandra P, Antoniw JW, Tay SS, Lowdell MW, Taylor PM, Yacoub MH.

Tissue Eng. 2006 Aug;12(8):2263-73.

PMID:
16968166
15.

A combinatorial pattern discovery approach for the prediction of membrane dipping (re-entrant) loops.

Lasso G, Antoniw JF, Mullins JG.

Bioinformatics. 2006 Jul 15;22(14):e290-7.

PMID:
16873484
16.

Characterization of molecules mediating cell-cell communication in human cardiac valve interstitial cells.

Latif N, Sarathchandra P, Taylor PM, Antoniw J, Brand N, Yacoub MH.

Cell Biochem Biophys. 2006;45(3):255-64.

PMID:
16845172
17.

Genome and EST analyses and expression of a gene family with putative functions in insect chemoreception.

Zhou JJ, Kan Y, Antoniw J, Pickett JA, Field LM.

Chem Senses. 2006 Jun;31(5):453-65.

PMID:
16581978
18.

DPVweb: a comprehensive database of plant and fungal virus genes and genomes.

Adams MJ, Antoniw JF.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D382-5.

19.

Ascorbic acid deficiency activates cell death and disease resistance responses in Arabidopsis.

Pavet V, Olmos E, Kiddle G, Mowla S, Kumar S, Antoniw J, Alvarez ME, Foyer CH.

Plant Physiol. 2005 Nov;139(3):1291-303.

20.

Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling.

Keon J, Rudd JJ, Antoniw J, Skinner W, Hargreaves J, Hammond-Kosack K.

Mol Plant Pathol. 2005 Sep 1;6(5):527-40. doi: 10.1111/j.1364-3703.2005.00304.x.

PMID:
20565677
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