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Items: 47

1.

FACT mediates cohesin function on chromatin.

Garcia-Luis J, Lazar-Stefanita L, Gutierrez-Escribano P, Thierry A, Cournac A, García A, González S, Sánchez M, Jarmuz A, Montoya A, Dore M, Kramer H, Karimi MM, Antequera F, Koszul R, Aragon L.

Nat Struct Mol Biol. 2019 Oct;26(10):970-979. doi: 10.1038/s41594-019-0307-x. Epub 2019 Oct 3.

PMID:
31582854
2.

Genome-wide search of nucleosome patterns using visual analytics.

Santamaría R, Therón R, Durán L, García A, González S, Sánchez M, Antequera F.

Bioinformatics. 2019 Jul 1;35(13):2185-2192. doi: 10.1093/bioinformatics/bty971.

3.

Evolution and future of Obstetrics and Gynaecology Nurses specialists (Midwives).

García EM, Antequera FB, Soto CR.

Enferm Clin. 2018 Sep - Oct;28(5):279-282. doi: 10.1016/j.enfcli.2018.08.007. English, Spanish. No abstract available.

PMID:
30227926
4.

CpG Islands: A Historical Perspective.

Antequera F, Bird A.

Methods Mol Biol. 2018;1766:3-13. doi: 10.1007/978-1-4939-7768-0_1.

PMID:
29605844
5.

Analysis of DNA Metabolism in Fission Yeast.

Antequera F, Humphrey TC.

Cold Spring Harb Protoc. 2018 Apr 2;2018(4). doi: 10.1101/pdb.top079863.

PMID:
28733402
6.

Two-Dimensional Gel Electrophoresis of DNA Replication Intermediates in Schizosaccharomyces pombe.

Sánchez M, Antequera F.

Cold Spring Harb Protoc. 2018 Mar 1;2018(3). doi: 10.1101/pdb.prot092007.

PMID:
28733396
7.

Retraction: Oncogenic activity of Cdc6 through repression of the INK4/ARF locus.

Gonzalez S, Klatt P, Delgado S, Conde E, Lopez-Rios F, Sanchez-Cespedes M, Mendez J, Antequera F, Serrano M.

Nature. 2017 Jul 12;547(7662):246. doi: 10.1038/nature23287.

PMID:
28703201
8.

Nucleosomal organization and DNA base composition patterns.

García A, González S, Antequera F.

Nucleus. 2017 Sep 3;8(5):469-474. doi: 10.1080/19491034.2017.1337611. Epub 2017 Jun 21. Review.

9.

Nucleosomal signatures impose nucleosome positioning in coding and noncoding sequences in the genome.

González S, García A, Vázquez E, Serrano R, Sánchez M, Quintales L, Antequera F.

Genome Res. 2016 Nov;26(11):1532-1543. Epub 2016 Sep 23.

10.

A conserved role of the RSC chromatin remodeler in the establishment of nucleosome-depleted regions.

Yague-Sanz C, Vázquez E, Sánchez M, Antequera F, Hermand D.

Curr Genet. 2017 May;63(2):187-193. doi: 10.1007/s00294-016-0642-y. Epub 2016 Aug 24. Review.

11.

Histone H2B ubiquitylation represses gametogenesis by opposing RSC-dependent chromatin remodeling at the ste11 master regulator locus.

Materne P, Vázquez E, Sánchez M, Yague-Sanz C, Anandhakumar J, Migeot V, Antequera F, Hermand D.

Elife. 2016 May 12;5. pii: e13500. doi: 10.7554/eLife.13500.

12.

Replication dynamics in fission and budding yeasts through DNA polymerase tracking.

Vázquez E, Antequera F.

Bioessays. 2015 Oct;37(10):1067-73. doi: 10.1002/bies.201500072. Epub 2015 Aug 21.

13.

Promoter nucleosome dynamics regulated by signalling through the CTD code.

Materne P, Anandhakumar J, Migeot V, Soriano I, Yague-Sanz C, Hidalgo E, Mignion C, Quintales L, Antequera F, Hermand D.

Elife. 2015 Jun 22;4:e09008. doi: 10.7554/eLife.09008.

14.

A species-specific nucleosomal signature defines a periodic distribution of amino acids in proteins.

Quintales L, Soriano I, Vázquez E, Segurado M, Antequera F.

Open Biol. 2015 Apr;5(4):140218. doi: 10.1098/rsob.140218.

15.

Dicer promotes transcription termination at sites of replication stress to maintain genome stability.

Castel SE, Ren J, Bhattacharjee S, Chang AY, Sánchez M, Valbuena A, Antequera F, Martienssen RA.

Cell. 2014 Oct 23;159(3):572-83. doi: 10.1016/j.cell.2014.09.031. Epub 2014 Oct 16.

16.

Comparative analysis of methods for genome-wide nucleosome cartography.

Quintales L, Vázquez E, Antequera F.

Brief Bioinform. 2015 Jul;16(4):576-87. doi: 10.1093/bib/bbu037. Epub 2014 Oct 8.

PMID:
25296770
17.

Different nucleosomal architectures at early and late replicating origins in Saccharomyces cerevisiae.

Soriano I, Morafraile EC, Vázquez E, Antequera F, Segurado M.

BMC Genomics. 2014 Sep 13;15:791. doi: 10.1186/1471-2164-15-791.

18.

PTPN13 regulates cellular signalling and β-catenin function during megakaryocytic differentiation.

Sardina JL, López-Ruano G, Prieto-Bermejo R, Sánchez-Sánchez B, Pérez-Fernández A, Sánchez-Abarca LI, Pérez-Simón JA, Quintales L, Sánchez-Yagüe J, Llanillo M, Antequera F, Hernández-Hernández A.

Biochim Biophys Acta. 2014 Dec;1843(12):2886-99. doi: 10.1016/j.bbamcr.2014.08.014. Epub 2014 Sep 3.

19.

Clustered regulatory elements at nucleosome-depleted regions punctuate a constant nucleosomal landscape in Schizosaccharomyces pombe.

Soriano I, Quintales L, Antequera F.

BMC Genomics. 2013 Nov 21;14:813. doi: 10.1186/1471-2164-14-813.

20.

Specification of DNA replication origins and genomic base composition in fission yeasts.

Mojardín L, Vázquez E, Antequera F.

J Mol Biol. 2013 Nov 29;425(23):4706-13. doi: 10.1016/j.jmb.2013.09.023. Epub 2013 Oct 3. Review.

PMID:
24095860
21.

RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II.

Zaratiegui M, Castel SE, Irvine DV, Kloc A, Ren J, Li F, de Castro E, Marín L, Chang AY, Goto D, Cande WZ, Antequera F, Arcangioli B, Martienssen RA.

Nature. 2011 Oct 16;479(7371):135-8. doi: 10.1038/nature10501.

22.

Nucleosomal organization of replication origins and meiotic recombination hotspots in fission yeast.

de Castro E, Soriano I, Marín L, Serrano R, Quintales L, Antequera F.

EMBO J. 2012 Jan 4;31(1):124-37. doi: 10.1038/emboj.2011.350. Epub 2011 Oct 11.

23.

Gcn5 facilitates Pol II progression, rather than recruitment to nucleosome-depleted stress promoters, in Schizosaccharomyces pombe.

Sansó M, Vargas-Pérez I, Quintales L, Antequera F, Ayté J, Hidalgo E.

Nucleic Acids Res. 2011 Aug;39(15):6369-79. doi: 10.1093/nar/gkr255. Epub 2011 Apr 22.

24.

Analysis of DNA strand-specific differential expression with high density tiling microarrays.

Quintales L, Sánchez M, Antequera F.

BMC Bioinformatics. 2010 Mar 17;11:136. doi: 10.1186/1471-2105-11-136.

25.

Structural diversity and dynamics of genomic replication origins in Schizosaccharomyces pombe.

Cotobal C, Segurado M, Antequera F.

EMBO J. 2010 Mar 3;29(5):934-42. doi: 10.1038/emboj.2009.411. Epub 2010 Jan 21.

26.

Overreplication of short DNA regions during S phase in human cells.

Gómez M, Antequera F.

Genes Dev. 2008 Feb 1;22(3):375-85. doi: 10.1101/gad.445608.

27.

Oncogenic activity of Cdc6 through repression of the INK4/ARF locus.

Gonzalez S, Klatt P, Delgado S, Conde E, Lopez-Rios F, Sanchez-Cespedes M, Mendez J, Antequera F, Serrano M.

Nature. 2006 Mar 30;440(7084):702-6. Retraction in: Nature. 2017 Jul 12;547(7662):246.

PMID:
16572177
28.

Inactivation of imprinted genes induced by cellular stress and tumorigenesis.

Pantoja C, de Los Ríos L, Matheu A, Antequera F, Serrano M.

Cancer Res. 2005 Jan 1;65(1):26-33.

29.

Genomic specification and epigenetic regulation of eukaryotic DNA replication origins.

Antequera F.

EMBO J. 2004 Nov 10;23(22):4365-70. Epub 2004 Oct 28. Review.

30.

Genome-wide distribution of DNA replication origins at A+T-rich islands in Schizosaccharomyces pombe.

Segurado M, de Luis A, Antequera F.

EMBO Rep. 2003 Nov;4(11):1048-53. Epub 2003 Oct 17.

31.

Structure, function and evolution of CpG island promoters.

Antequera F.

Cell Mol Life Sci. 2003 Aug;60(8):1647-58. Review.

PMID:
14504655
32.
33.

Species-specific organization of CpG island promoters at mammalian homologous genes.

Cuadrado M, Sacristán M, Antequera F.

EMBO Rep. 2001 Jul;2(7):586-92. Epub 2001 Jul 3.

34.

Organization of DNA replication origins in the fission yeast genome.

Gómez M, Antequera F.

EMBO J. 1999 Oct 15;18(20):5683-90.

35.
36.

Initiation of DNA replication at CpG islands in mammalian chromosomes.

Delgado S, Gómez M, Bird A, Antequera F.

EMBO J. 1998 Apr 15;17(8):2426-35.

37.

Predicting the total number of human genes.

Antequera F, Bird A.

Nat Genet. 1994 Oct;8(2):114. No abstract available.

PMID:
7842006
38.

Number of CpG islands and genes in human and mouse.

Antequera F, Bird A.

Proc Natl Acad Sci U S A. 1993 Dec 15;90(24):11995-9.

39.

CpG islands.

Antequera F, Bird A.

EXS. 1993;64:169-85. Review. No abstract available.

PMID:
8418949
40.

High levels of de novo methylation and altered chromatin structure at CpG islands in cell lines.

Antequera F, Boyes J, Bird A.

Cell. 1990 Aug 10;62(3):503-14.

PMID:
1974172
41.

A nuclear protein that binds preferentially to methylated DNA in vitro may play a role in the inaccessibility of methylated CpGs in mammalian nuclei.

Meehan R, Antequera F, Lewis J, MacLeod D, McKay S, Kleiner E, Bird AP.

Philos Trans R Soc Lond B Biol Sci. 1990 Jan 30;326(1235):199-205.

PMID:
1968657
42.

Specific protection of methylated CpGs in mammalian nuclei.

Antequera F, Macleod D, Bird AP.

Cell. 1989 Aug 11;58(3):509-17.

PMID:
2474378
43.

Unmethylated CpG islands associated with genes in higher plant DNA.

Antequera F, Bird AP.

EMBO J. 1988 Aug;7(8):2295-9.

44.
45.

Developmental modulation of DNA methylation in the fungus Phycomyces blakesleeanus.

Antequera F, Tamame M, Vilanueva JR, Santos T.

Nucleic Acids Res. 1985 Sep 25;13(18):6545-58.

46.

DNA methylation in the fungi.

Antequera F, Tamame M, Villanueva JR, Santos T.

J Biol Chem. 1984 Jul 10;259(13):8033-6.

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