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Items: 19


Acricotopus indet. morphotype incurvatus: Description and genetics of a new Orthocladiinae (Diptera: Chironomidae) larval morphotype from the Tibetan Plateau.

Laug A, Hamerlík L, Anslan S, Engels S, Turner F, Wang J, Schwalb A.

Zootaxa. 2019 Aug 14;4656(3):zootaxa.4656.3.10. doi: 10.11646/zootaxa.4656.3.10.


Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens.

Loit K, Adamson K, Bahram M, Puusepp R, Anslan S, Kiiker R, Drenkhan R, Tedersoo L.

Appl Environ Microbiol. 2019 Oct 16;85(21). pii: e01368-19. doi: 10.1128/AEM.01368-19. Print 2019 Nov 1.


Towards PacBio-based pan-eukaryote metabarcoding using full-length ITS sequences.

Tedersoo L, Anslan S.

Environ Microbiol Rep. 2019 Oct;11(5):659-668. doi: 10.1111/1758-2229.12776. Epub 2019 Jul 4.


Ectomycorrhizal fungal communities are dominated by mammalian dispersed truffle-like taxa in north-east Australian woodlands.

Nuske SJ, Anslan S, Tedersoo L, Congdon BC, Abell SE.

Mycorrhiza. 2019 May;29(3):181-193. doi: 10.1007/s00572-019-00886-2. Epub 2019 Mar 21.


Mycobiome diversity: high-throughput sequencing and identification of fungi.

Nilsson RH, Anslan S, Bahram M, Wurzbacher C, Baldrian P, Tedersoo L.

Nat Rev Microbiol. 2019 Jan;17(2):95-109. doi: 10.1038/s41579-018-0116-y. Review.


Corrigendum for: "Oomycete-specific ITS primers for identification and metabarcoding" published in MycoKeys, doi: 10.3897/mycokeys.14.9244.

Riit T, Tedersoo L, Drenkhan R, Runno-Paurson E, Kokko H, Anslan S.

MycoKeys. 2018 Nov 5;(41):119-120. doi: 10.3897/mycokeys.41.30558. eCollection 2018.


The endangered northern bettong, Bettongia tropica, performs a unique and potentially irreplaceable dispersal function for ectomycorrhizal truffle fungi.

Nuske SJ, Anslan S, Tedersoo L, Bonner MTL, Congdon BC, Abell SE.

Mol Ecol. 2018 Dec;27(23):4960-4971. doi: 10.1111/mec.14916. Epub 2018 Nov 22.


High-throughput identification and diagnostics of pathogens and pests: Overview and practical recommendations.

Tedersoo L, Drenkhan R, Anslan S, Morales-Rodriguez C, Cleary M.

Mol Ecol Resour. 2019 Jan;19(1):47-76. doi: 10.1111/1755-0998.12959. Epub 2018 Dec 4. Review.


Great differences in performance and outcome of high-throughput sequencing data analysis platforms for fungal metabarcoding.

Anslan S, Nilsson RH, Wurzbacher C, Baldrian P, Leho Tedersoo, Bahram M.

MycoKeys. 2018 Sep 11;(39):29-40. doi: 10.3897/mycokeys.39.28109. eCollection 2018.


Structure and function of the global topsoil microbiome.

Bahram M, Hildebrand F, Forslund SK, Anderson JL, Soudzilovskaia NA, Bodegom PM, Bengtsson-Palme J, Anslan S, Coelho LP, Harend H, Huerta-Cepas J, Medema MH, Maltz MR, Mundra S, Olsson PA, Pent M, Põlme S, Sunagawa S, Ryberg M, Tedersoo L, Bork P.

Nature. 2018 Aug;560(7717):233-237. doi: 10.1038/s41586-018-0386-6. Epub 2018 Aug 1.


Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment.

Bahram M, Anslan S, Hildebrand F, Bork P, Tedersoo L.

Environ Microbiol Rep. 2019 Aug;11(4):487-494. doi: 10.1111/1758-2229.12684. Epub 2018 Sep 12.


Tree species identity and diversity drive fungal richness and community composition along an elevational gradient in a Mediterranean ecosystem.

Saitta A, Anslan S, Bahram M, Brocca L, Tedersoo L.

Mycorrhiza. 2018 Jan;28(1):39-47. doi: 10.1007/s00572-017-0806-8. Epub 2017 Nov 6.


PacBio metabarcoding of Fungi and other eukaryotes: errors, biases and perspectives.

Tedersoo L, Tooming-Klunderud A, Anslan S.

New Phytol. 2018 Feb;217(3):1370-1385. doi: 10.1111/nph.14776. Epub 2017 Sep 14.


Greater diversity of soil fungal communities and distinguishable seasonal variation in temperate deciduous forests compared with subtropical evergreen forests of eastern China.

He J, Tedersoo L, Hu A, Han C, He D, Wei H, Jiao M, Anslan S, Nie Y, Jia Y, Zhang G, Yu G, Liu S, Shen W.

FEMS Microbiol Ecol. 2017 Jul 1;93(7). doi: 10.1093/femsec/fix069.


PipeCraft: Flexible open-source toolkit for bioinformatics analysis of custom high-throughput amplicon sequencing data.

Anslan S, Bahram M, Hiiesalu I, Tedersoo L.

Mol Ecol Resour. 2017 Nov;17(6):e234-e240. doi: 10.1111/1755-0998.12692. Epub 2017 Jun 21.


Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment.

Bahram M, Kohout P, Anslan S, Harend H, Abarenkov K, Tedersoo L.

ISME J. 2016 Apr;10(4):885-96. doi: 10.1038/ismej.2015.164. Epub 2015 Sep 22.


FUNGAL BIOGEOGRAPHY. Response to Comment on "Global diversity and geography of soil fungi".

Tedersoo L, Bahram M, Põlme S, Anslan S, Riit T, Kõljalg U, Nilsson RH, Hildebrand F, Abarenkov K.

Science. 2015 Aug 28;349(6251):936. doi: 10.1126/science.aaa5594. Epub 2015 Aug 27.


Tree diversity and species identity effects on soil fungi, protists and animals are context dependent.

Tedersoo L, Bahram M, Cajthaml T, Põlme S, Hiiesalu I, Anslan S, Harend H, Buegger F, Pritsch K, Koricheva J, Abarenkov K.

ISME J. 2016 Feb;10(2):346-62. doi: 10.1038/ismej.2015.116. Epub 2015 Jul 14.


Fungal biogeography. Global diversity and geography of soil fungi.

Tedersoo L, Bahram M, Põlme S, Kõljalg U, Yorou NS, Wijesundera R, Villarreal Ruiz L, Vasco-Palacios AM, Thu PQ, Suija A, Smith ME, Sharp C, Saluveer E, Saitta A, Rosas M, Riit T, Ratkowsky D, Pritsch K, Põldmaa K, Piepenbring M, Phosri C, Peterson M, Parts K, Pärtel K, Otsing E, Nouhra E, Njouonkou AL, Nilsson RH, Morgado LN, Mayor J, May TW, Majuakim L, Lodge DJ, Lee SS, Larsson KH, Kohout P, Hosaka K, Hiiesalu I, Henkel TW, Harend H, Guo LD, Greslebin A, Grelet G, Geml J, Gates G, Dunstan W, Dunk C, Drenkhan R, Dearnaley J, De Kesel A, Dang T, Chen X, Buegger F, Brearley FQ, Bonito G, Anslan S, Abell S, Abarenkov K.

Science. 2014 Nov 28;346(6213):1256688. doi: 10.1126/science.1256688.

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