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Through the Eyes of Faculty: Using Personas as a Tool for Learner-Centered Professional Development.

Zagallo P, McCourt J, Idsardi R, Smith MK, Urban-Lurain M, Andrews TC, Haudek K, Knight JK, Merrill J, Nehm R, Prevost LB, Lemons PP.

CBE Life Sci Educ. 2019 Dec;18(4):ar62. doi: 10.1187/cbe.19-06-0114.


Mammary microbiome of lactating organic dairy cows varies by time, tissue site, and infection status.

Andrews T, Neher DA, Weicht TR, Barlow JW.

PLoS One. 2019 Nov 14;14(11):e0225001. doi: 10.1371/journal.pone.0225001. eCollection 2019.


Prospective Evaluation of Cognitive Health and Related Factors in Elderly at Risk for Developing Alzheimer's Dementia: A Longitudinal Cohort Study.

Udeh-Momoh C, Price G, Ropacki MT, Ketter N, Andrews T, Arrighi HM, Brashear HR, Robb C, Bassil DT, Cohn M, Curry LK, Su B, Perera D, Giannakopoulou P, Car J, Ward HA, Perneczky R, Novak G, Middleton L.

J Prev Alzheimers Dis. 2019;6(4):256-266. doi: 10.14283/jpad.2019.31.


Initial Results from a Pilot Comparative Effectiveness Study of Three Methotrexate-Based Consensus Treatment Plans for Juvenile Localized Scleroderma.

Li SC, Torok KS, Rabinovich CE, Dedeoglu F, Becker ML, Ferguson PJ, Hong SD, Ibarra MF, Stewart K, Pope E, Higgins GC, Laxer RM, Mason T 2nd, Fuhlbrigge RC, Andrews T; CARRA Registry Investigators .

J Rheumatol. 2019 Oct 15. pii: jrheum.190311. doi: 10.3899/jrheum.190311. [Epub ahead of print]


Exploring the Relationship between Teacher Knowledge and Active-Learning Implementation in Large College Biology Courses.

Andrews TC, Auerbach AJJ, Grant EF.

CBE Life Sci Educ. 2019 Dec;18(4):ar48. doi: 10.1187/cbe.19-01-0010.


Strong Dependence of Atmospheric Feedbacks on Mixed-Phase Microphysics and Aerosol-Cloud Interactions in HadGEM3.

Bodas-Salcedo A, Mulcahy JP, Andrews T, Williams KD, Ringer MA, Field PR, Elsaesser GS.

J Adv Model Earth Syst. 2019 Jun;11(6):1735-1758. doi: 10.1029/2019MS001688. Epub 2019 Jun 19.


The effect of cysteine oxidation on DJ-1 cytoprotective function in human alveolar type II cells.

Bahmed K, Boukhenouna S, Karim L, Andrews T, Lin J, Powers R, Wilson MA, Lin CR, Messier E, Reisdorph N, Powell RL, Tang HY, Mason RJ, Criner GJ, Kosmider B.

Cell Death Dis. 2019 Sep 2;10(9):638. doi: 10.1038/s41419-019-1833-5.


The Malaria Cell Atlas: Single parasite transcriptomes across the complete Plasmodium life cycle.

Howick VM, Russell AJC, Andrews T, Heaton H, Reid AJ, Natarajan K, Butungi H, Metcalf T, Verzier LH, Rayner JC, Berriman M, Herren JK, Billker O, Hemberg M, Talman AM, Lawniczak MKN.

Science. 2019 Aug 23;365(6455). pii: eaaw2619. doi: 10.1126/science.aaw2619.


The political complexity of attack and defense.

Andrews TM, Huddy L, Kline R, Nam HH, Sawyer K.

Behav Brain Sci. 2019 Aug 13;42:e117. doi: 10.1017/S0140525X19000852.


A data-driven approach to stimulus selection reveals an image-based representation of objects in high-level visual areas.

Coggan DD, Giannakopoulou A, Ali S, Goz B, Watson DM, Hartley T, Baker DH, Andrews TJ.

Hum Brain Mapp. 2019 Nov 1;40(16):4716-4731. doi: 10.1002/hbm.24732. Epub 2019 Jul 23.


Developing comparative effectiveness studies for a rare, understudied pediatric disease: lessons learned from the CARRA juvenile localized scleroderma consensus treatment plan pilot study.

Li SC, Fuhlbrigge RC, Laxer RM, Pope E, Ibarra MF, Stewart K, Mason T 2nd, Becker ML, Hong S, Dedeoglu F, Torok KS, Rabinovich CE, Ferguson PJ, Punaro M, Feldman BM, Andrews T, Higgins GC; CARRA Registry Investigators.

Pediatr Rheumatol Online J. 2019 Jul 15;17(1):43. doi: 10.1186/s12969-019-0350-5.


Recurrent miscalling of missense variation from short-read genome sequence data.

Field MA, Burgio G, Chuah A, Al Shekaili J, Hassan B, Al Sukaiti N, Foote SJ, Cook MC, Andrews TD.

BMC Genomics. 2019 Jul 16;20(Suppl 8):546. doi: 10.1186/s12864-019-5863-2.


Nurses keeping patients safe by managing risk in perioperative settings: A classic grounded theory study.

Brien BO, Andrews T, Savage E.

J Nurs Manag. 2019 Oct;27(7):1454-1461. doi: 10.1111/jonm.12829. Epub 2019 Jul 15.


Activity Level and Type During Post-acute Stages of Concussion May Play an Important Role in Improving Symptoms Among an Active Duty Military Population.

Remigio-Baker RA, Bailie JM, Gregory E, Cole WR, McCulloch KL, Cecchini A, Stuessi K, Andrews TR, Qashu F, Mullins L, Sargent P, Ettenhofer ML.

Front Neurol. 2019 Jun 19;10:602. doi: 10.3389/fneur.2019.00602. eCollection 2019.


Activity Level During Acute Concussion May Predict Symptom Recovery Within an Active Duty Military Population.

Remigio-Baker RA, Bailie JM, Gregory E, Cole WR, McCulloch KL, Cecchini A, Stuessi K, Andrews TR, Mullins L, Ettenhofer ML.

J Head Trauma Rehabil. 2019 Jun 25. doi: 10.1097/HTR.0000000000000498. [Epub ahead of print]


Transanal endoscopic microsurgery for rectal lesions in a specialist regional early rectal cancer centre: the Mersey experience.

Ondhia M, Tamvakeras P, O'Toole P, Montazerri A, Andrews T, Farrell C, Ahmed S, Slawik S, Ahmed S; Merseyside Early Rectal Cancer Network.

Colorectal Dis. 2019 Oct;21(10):1164-1174. doi: 10.1111/codi.14730. Epub 2019 Jul 1.


IRF2 transcriptionally induces GSDMD expression for pyroptosis.

Kayagaki N, Lee BL, Stowe IB, Kornfeld OS, O'Rourke K, Mirrashidi KM, Haley B, Watanabe C, Roose-Girma M, Modrusan Z, Kummerfeld S, Reja R, Zhang Y, Cho V, Andrews TD, Morris LX, Goodnow CC, Bertram EM, Dixit VM.

Sci Signal. 2019 May 21;12(582). pii: eaax4917. doi: 10.1126/scisignal.aax4917.


Short term outcomes in term and late preterm neonates admitted to the well-baby nursery after resuscitation in the delivery room.

Spillane NT, Chivily C, Andrews T.

J Perinatol. 2019 Jul;39(7):983-989. doi: 10.1038/s41372-019-0396-8. Epub 2019 May 17.


Functional rare and low frequency variants in BLK and BANK1 contribute to human lupus.

Jiang SH, Athanasopoulos V, Ellyard JI, Chuah A, Cappello J, Cook A, Prabhu SB, Cardenas J, Gu J, Stanley M, Roco JA, Papa I, Yabas M, Walters GD, Burgio G, McKeon K, Byers JM, Burrin C, Enders A, Miosge LA, Canete PF, Jelusic M, Tasic V, Lungu AC, Alexander SI, Kitching AR, Fulcher DA, Shen N, Arsov T, Gatenby PA, Babon JJ, Mallon DF, de Lucas Collantes C, Stone EA, Wu P, Field MA, Andrews TD, Cho E, Pascual V, Cook MC, Vinuesa CG.

Nat Commun. 2019 May 17;10(1):2201. doi: 10.1038/s41467-019-10242-9.


IL-1 receptor antagonist, anakinra, prevents myocardial dysfunction in a mouse model of Kawasaki disease vasculitis and myocarditis.

Gorelik M, Lee Y, Abe M, Andrews T, Davis L, Patterson J, Chen S, Crother TR, Aune GJ, Noval Rivas M, Arditi M.

Clin Exp Immunol. 2019 Oct;198(1):101-110. doi: 10.1111/cei.13314. Epub 2019 Jun 21.


False signals induced by single-cell imputation.

Andrews TS, Hemberg M.

Version 2. F1000Res. 2018 Nov 2 [revised 2019 Jan 1];7:1740. doi: 10.12688/f1000research.16613.2. eCollection 2018.


EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data.

Lun ATL, Riesenfeld S, Andrews T, Dao TP, Gomes T; participants in the 1st Human Cell Atlas Jamboree, Marioni JC.

Genome Biol. 2019 Mar 22;20(1):63. doi: 10.1186/s13059-019-1662-y.


Symmetrical Viewpoint Representations in Face-Selective Regions Convey an Advantage in the Perception and Recognition of Faces.

Flack TR, Harris RJ, Young AW, Andrews TJ.

J Neurosci. 2019 May 8;39(19):3741-3751. doi: 10.1523/JNEUROSCI.1977-18.2019. Epub 2019 Mar 6.


Quantifying the Importance of Rapid Adjustments for Global Precipitation Changes.

Myhre G, Kramer RJ, Smith CJ, Hodnebrog Ø, Forster P, Soden BJ, Samset BH, Stjern CW, Andrews T, Boucher O, Faluvegi G, Fläschner D, Kasoar M, Kirkevåg A, Lamarque JF, Olivié D, Richardson T, Shindell D, Stier P, Takemura T, Voulgarakis A, Watson-Parris D.

Geophys Res Lett. 2018 Oct 28;45(20):11399-11405. doi: 10.1029/2018GL079474. Epub 2018 Oct 30.


Relationship of Nocturnal Sleep Dysfunction and Pain Subtypes in Parkinson's Disease.

Martinez-Martin P, Rizos AM, Wetmore JB, Antonini A, Odin P, Pal S, Sophia R, Carroll C, Martino D, Falup-Pecurariu C, Kessel B, Andrews T, Paviour D, Trenkwalder C, Chaudhuri KR; EUROPAR & MDS Non‐Motor PD Study Group.

Mov Disord Clin Pract. 2018 Nov 8;6(1):57-64. doi: 10.1002/mdc3.12694. eCollection 2019 Jan.


Understanding Rapid Adjustments to Diverse Forcing Agents.

Smith CJ, Kramer RJ, Myhre G, Forster PM, Soden BJ, Andrews T, Boucher O, Faluvegi G, Fläschner D, Hodnebrog Ø, Kasoar M, Kharin V, Kirkevåg A, Lamarque JF, Mülmenstädt J, Olivié D, Richardson T, Samset BH, Shindell D, Stier P, Takemura T, Voulgarakis A, Watson-Parris D.

Geophys Res Lett. 2018 Nov 16;45(21):12023-12031. doi: 10.1029/2018GL079826. Epub 2018 Nov 8.


Publisher Correction: Challenges in unsupervised clustering of single-cell RNA-seq data.

Kiselev VY, Andrews TS, Hemberg M.

Nat Rev Genet. 2019 May;20(5):310. doi: 10.1038/s41576-019-0095-5.


Challenges in unsupervised clustering of single-cell RNA-seq data.

Kiselev VY, Andrews TS, Hemberg M.

Nat Rev Genet. 2019 May;20(5):273-282. doi: 10.1038/s41576-018-0088-9. Review. Erratum in: Nat Rev Genet. 2019 Jan 22;:.


M3Drop: dropout-based feature selection for scRNASeq.

Andrews TS, Hemberg M.

Bioinformatics. 2019 Aug 15;35(16):2865-2867. doi: 10.1093/bioinformatics/bty1044.


Selectivity for mid-level properties of faces and places in the fusiform face area and parahippocampal place area.

Coggan DD, Baker DH, Andrews TJ.

Eur J Neurosci. 2019 Jun;49(12):1587-1596. doi: 10.1111/ejn.14327. Epub 2019 Jan 20.


TSPO upregulation in bipolar disorder and concomitant downregulation of mitophagic proteins and NLRP3 inflammasome activation.

Scaini G, Barichello T, Fries GR, Kennon EA, Andrews T, Nix BR, Zunta-Soares G, Valvassori SS, Soares JC, Quevedo J.

Neuropsychopharmacology. 2019 Jun;44(7):1291-1299. doi: 10.1038/s41386-018-0293-4. Epub 2018 Dec 11.


Vitamin D, bone mineral density and risk of fracture in people with intellectual disabilities.

Frighi V, Morovat A, Andrews TM, Rana F, Stephenson MT, White SJ, Fower E, Roast J, Goodwin GM.

J Intellect Disabil Res. 2019 Apr;63(4):357-367. doi: 10.1111/jir.12581. Epub 2018 Dec 19.


Reduced connectivity between mentalizing and mirror systems in autism spectrum condition.

Cole EJ, Barraclough NE, Andrews TJ.

Neuropsychologia. 2019 Jan;122:88-97. doi: 10.1016/j.neuropsychologia.2018.11.008. Epub 2018 Nov 20.


Gain-of-function IKBKB mutation causes human combined immune deficiency.

Cardinez C, Miraghazadeh B, Tanita K, da Silva E, Hoshino A, Okada S, Chand R, Asano T, Tsumura M, Yoshida K, Ohnishi H, Kato Z, Yamazaki M, Okuno Y, Miyano S, Kojima S, Ogawa S, Andrews TD, Field MA, Burgio G, Morio T, Vinuesa CG, Kanegane H, Cook MC.

J Exp Med. 2018 Nov 5;215(11):2715-2724. doi: 10.1084/jem.20180639. Epub 2018 Oct 18.


Neural Correlates of Group Bias During Natural Viewing.

Andrews TJ, Smith RK, Hoggart RL, Ulrich PIN, Gouws AD.

Cereb Cortex. 2018 Oct 1. doi: 10.1093/cercor/bhy206. [Epub ahead of print]


New Features for Measuring Disease Activity in Pediatric Localized Scleroderma.

Li SC, Li X, Pope E, Stewart K, Higgins GC, Rabinovich CE, O'Neil KM, Haines KA, Laxer RM, Punaro M, Jacobe H, Andrews T, Wittkowski K, Nyirenda T, Foeldvari I, Torok KS.

J Rheumatol. 2018 Dec;45(12):1680-1688. doi: 10.3899/jrheum.171381. Epub 2018 Sep 15.


Smartphones and mobile applications (apps) in clinical nursing education: A student perspective.

O'Connor S, Andrews T.

Nurse Educ Today. 2018 Oct;69:172-178. doi: 10.1016/j.nedt.2018.07.013. Epub 2018 Aug 1.


Increased incidence of respiratory distress syndrome in neonates of mothers with abnormally invasive placentation.

Spillane NT, Zamudio S, Alvarez-Perez J, Andrews T, Nyirenda T, Alvarez M, Al-Khan A.

PLoS One. 2018 Jul 26;13(7):e0201266. doi: 10.1371/journal.pone.0201266. eCollection 2018.


Phosphorylation switches Bax from promoting to inhibiting apoptosis thereby increasing drug resistance.

Kale J, Kutuk O, Brito GC, Andrews TS, Leber B, Letai A, Andrews DW.

EMBO Rep. 2018 Sep;19(9). pii: e45235. doi: 10.15252/embr.201745235. Epub 2018 Jul 9.


First comprehensive tool for screening pain in Parkinson's disease: the King's Parkinson's Disease Pain Questionnaire.

Martinez-Martin P, Rizos AM, Wetmore J, Antonini A, Odin P, Pal S, Sophia R, Carroll C, Martino D, Falup-Pecurariu C, Kessel B, Andrews T, Paviour D, Trenkwalder C, Chaudhuri KR; EUROPAR and MDS Non-motor PD Study Group.

Eur J Neurol. 2018 Oct;25(10):1255-1261. doi: 10.1111/ene.13691. Epub 2018 Jun 22.


Sensible heat has significantly affected the global hydrological cycle over the historical period.

Myhre G, Samset BH, Hodnebrog Ø, Andrews T, Boucher O, Faluvegi G, Fläschner D, Forster PM, Kasoar M, Kharin V, Kirkevåg A, Lamarque JF, Olivié D, Richardson TB, Shawki D, Shindell D, Shine KP, Stjern CW, Takemura T, Voulgarakis A.

Nat Commun. 2018 May 15;9(1):1922. doi: 10.1038/s41467-018-04307-4.


Patterns of neural response in face regions are predicted by low-level image properties.

Weibert K, Flack TR, Young AW, Andrews TJ.

Cortex. 2018 Jun;103:199-210. doi: 10.1016/j.cortex.2018.03.009. Epub 2018 Mar 23.


Aerobic Exercise During Early Murine Doxorubicin Exposure Mitigates Cardiac Toxicity.

Wang F, Iskra B, Kleinerman E, Alvarez-Florez C, Andrews T, Shaw A, Chandra J, Schadler K, Aune GJ.

J Pediatr Hematol Oncol. 2018 Apr;40(3):208-215. doi: 10.1097/MPH.0000000000001112.


Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis.

Bergiers I, Andrews T, Vargel Bölükbaşı Ö, Buness A, Janosz E, Lopez-Anguita N, Ganter K, Kosim K, Celen C, Itır Perçin G, Collier P, Baying B, Benes V, Hemberg M, Lancrin C.

Elife. 2018 Mar 20;7. pii: e29312. doi: 10.7554/eLife.29312.


Playing the game: How young people moderate influences in accommodating asthma in their lives.

Hughes M, Savage E, Andrews T.

J Child Health Care. 2018 Sep;22(3):309-316. doi: 10.1177/1367493518761010. Epub 2018 Mar 13.


Teacher Knowledge for Active-Learning Instruction: Expert-Novice Comparison Reveals Differences.

Auerbach AJ, Higgins M, Brickman P, Andrews TC.

CBE Life Sci Educ. 2018 Spring;17(1). pii: ar12. doi: 10.1187/cbe.17-07-0149.


Moving Evolution Education Forward: A Systematic Analysis of Literature to Identify Gaps in Collective Knowledge for Teaching.

Ziadie MA, Andrews TC.

CBE Life Sci Educ. 2018 Spring;17(1). pii: ar11. doi: 10.1187/cbe.17-08-0190.


A Retrospective Review to Determine If Children with Sickle Cell Disease Receive Hydroxyurea Monitoring.

Creary SE, O'Brien SH, Stanek J, Hankins JS, Garee A, Ball KR, Andrews TM, Chisolm DJ.

Pediatr Qual Saf. 2017 May-Jun;2(3). pii: e024. Epub 2017 May 25.

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