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Items: 1 to 50 of 115

1.

Evolutionary and functional impact of common polymorphic inversions in the human genome.

Giner-Delgado C, Villatoro S, Lerga-Jaso J, Gayà-Vidal M, Oliva M, Castellano D, Pantano L, Bitarello BD, Izquierdo D, Noguera I, Olalde I, Delprat A, Blancher A, Lalueza-Fox C, Esko T, O'Reilly PF, Andrés AM, Ferretti L, Puig M, Cáceres M.

Nat Commun. 2019 Sep 17;10(1):4222. doi: 10.1038/s41467-019-12173-x.

2.

Matrix-guided control of mitochondrial function in cardiac myocytes.

Lyra-Leite DM, Andres AM, Cho N, Petersen AP, Ariyasinghe NR, Kim SS, Gottlieb RA, McCain ML.

Acta Biomater. 2019 Oct 1;97:281-295. doi: 10.1016/j.actbio.2019.08.007. Epub 2019 Aug 8.

PMID:
31401347
3.

Simvastatin induces autophagic flux to restore cerulein-impaired phagosome-lysosome fusion in acute pancreatitis.

Piplani H, Marek-Iannucci S, Sin J, Hou J, Takahashi T, Sharma A, de Freitas Germano J, Waldron RT, Saadaeijahromi H, Song Y, Gulla A, Wu B, Lugea A, Andres AM, Gaisano HY, Gottlieb RA, Pandol SJ.

Biochim Biophys Acta Mol Basis Dis. 2019 Nov 1;1865(11):165530. doi: 10.1016/j.bbadis.2019.08.006. Epub 2019 Aug 6.

PMID:
31398467
4.

Mitophagy protects against statin-mediated skeletal muscle toxicity.

Ramesh M, Campos JC, Lee P, Song Y, Hernandez G, Sin J, Tucker KC, Saadaeijahromi H, Gurney M, Ferreira JCB, Andres AM.

FASEB J. 2019 Aug 23:fj201900807RR. doi: 10.1096/fj.201900807RR. [Epub ahead of print]

PMID:
31365836
5.

Comment on "Efficient statistical inference for a parallel study with missing data by using an exact method" by Shan et al. (2019).

Andrés AM.

J Biopharm Stat. 2019 Jul 19:1-4. doi: 10.1080/10543406.2019.1641818. [Epub ahead of print] No abstract available.

PMID:
31322061
6.

Myocardial hypothermia increases autophagic flux, mitochondrial mass and myocardial function after ischemia-reperfusion injury.

Marek-Iannucci S, Thomas A, Hou J, Crupi A, Sin J, Taylor DJ, Czer LS, Esmailian F, Mentzer RM Jr, Andres AM, Gottlieb RA.

Sci Rep. 2019 Jul 10;9(1):10001. doi: 10.1038/s41598-019-46452-w.

7.

Pharmacist-driven multidisciplinary pretreatment workup process for hepatitis C care: A novel model for same-day pretreatment workup.

Houck KK, Ifeachor AP, Fleming BS, Andres AM, O'Donovan KN, Johnson AJ, Liangpunsakul S.

J Am Pharm Assoc (2003). 2019 Sep - Oct;59(5):710-716. doi: 10.1016/j.japh.2019.05.003. Epub 2019 Jun 18.

PMID:
31227418
8.

Genetic Variation in Pan Species Is Shaped by Demographic History and Harbors Lineage-Specific Functions.

Han S, Andrés AM, Marques-Bonet T, Kuhlwilm M.

Genome Biol Evol. 2019 Apr 1;11(4):1178-1191. doi: 10.1093/gbe/evz047.

9.

Retraction Note: Endocrine disruptors induce perturbations in endoplasmic reticulum and mitochondria of human pluripotent stem cell derivatives.

Rajamani U, Gross AR, Ocampo C, Andres AM, Gottlieb RA, Sareen D.

Nat Commun. 2019 Feb 2;10(1):645. doi: 10.1038/s41467-019-08572-9.

10.

Coxsackievirus B infection induces the extracellular release of miR-590-5p, a proviral microRNA.

Germano JF, Sawaged S, Saadaeijahromi H, Andres AM, Feuer R, Gottlieb RA, Sin J.

Virology. 2019 Mar;529:169-176. doi: 10.1016/j.virol.2019.01.025. Epub 2019 Jan 30.

11.

Immune Gene Diversity in Archaic and Present-day Humans.

Reher D, Key FM, Andrés AM, Kelso J.

Genome Biol Evol. 2019 Jan 1;11(1):232-241. doi: 10.1093/gbe/evy271.

12.

Centromere protein F (CENPF), a microtubule binding protein, modulates cancer metabolism by regulating pyruvate kinase M2 phosphorylation signaling.

Shahid M, Lee MY, Piplani H, Andres AM, Zhou B, Yeon A, Kim M, Kim HL, Kim J.

Cell Cycle. 2018;17(24):2802-2818. doi: 10.1080/15384101.2018.1557496. Epub 2018 Dec 17.

PMID:
30526248
13.

Quantitative Proteomic Analysis Reveals Caffeine-Perturbed Proteomic Profiles in Normal Bladder Epithelial Cells.

Shahid M, Kim M, Yeon A, Andres AM, You S, Kim J.

Proteomics. 2018 Oct;18(20):e1800190. doi: 10.1002/pmic.201800190. Epub 2018 Oct 11.

14.

Rejoinder to Mr. Peter J. Laud.

Hernández MÁ, Andrés AM, Tejedor IH.

J Biopharm Stat. 2018;28(5):1021-1023. doi: 10.1080/10543406.2018.1489412. Epub 2018 Jul 9. No abstract available.

PMID:
29985761
15.

Myogenic Progenitor Cell Differentiation Is Dependent on Modulation of Mitochondrial Biogenesis through Autophagy.

Hiraumi Y, Huang C, Andres AM, Xiong Y, Ramil J, Gottlieb RA.

In: Nakanishi T, Markwald RR, Baldwin HS, Keller BB, Srivastava D, Yamagishi H, editors. Etiology and Morphogenesis of Congenital Heart Disease: From Gene Function and Cellular Interaction to Morphology [Internet]. Tokyo: Springer; 2016. Chapter 15.
2016 Jun 25.

16.

Human local adaptation of the TRPM8 cold receptor along a latitudinal cline.

Key FM, Abdul-Aziz MA, Mundry R, Peter BM, Sekar A, D'Amato M, Dennis MY, Schmidt JM, Andrés AM.

PLoS Genet. 2018 May 3;14(5):e1007298. doi: 10.1371/journal.pgen.1007298. eCollection 2018 May.

17.

Super-Obese Patient-Derived iPSC Hypothalamic Neurons Exhibit Obesogenic Signatures and Hormone Responses.

Rajamani U, Gross AR, Hjelm BE, Sequeira A, Vawter MP, Tang J, Gangalapudi V, Wang Y, Andres AM, Gottlieb RA, Sareen D.

Cell Stem Cell. 2018 May 3;22(5):698-712.e9. doi: 10.1016/j.stem.2018.03.009. Epub 2018 Apr 19.

18.

Signatures of Long-Term Balancing Selection in Human Genomes.

Bitarello BD, de Filippo C, Teixeira JC, Schmidt JM, Kleinert P, Meyer D, Andrés AM.

Genome Biol Evol. 2018 Mar 1;10(3):939-955. doi: 10.1093/gbe/evy054.

19.

One-tailed asymptotic inferences for the difference of proportions: Analysis of 97 methods of inference.

Hernández MÁ, Andrés AM, Tejedor IH.

J Biopharm Stat. 2018;28(6):1090-1104. doi: 10.1080/10543406.2018.1452028. Epub 2018 Apr 2.

PMID:
29608389
20.

Exosome-Mediated Benefits of Cell Therapy in Mouse and Human Models of Duchenne Muscular Dystrophy.

Aminzadeh MA, Rogers RG, Fournier M, Tobin RE, Guan X, Childers MK, Andres AM, Taylor DJ, Ibrahim A, Ding X, Torrente A, Goldhaber JM, Lewis M, Gottlieb RA, Victor RA, Marbán E.

Stem Cell Reports. 2018 Mar 13;10(3):942-955. doi: 10.1016/j.stemcr.2018.01.023. Epub 2018 Mar 1.

21.

Long-term results of surgery for bowel lengthening: how many transplants are avoided, for which patients?

Hernandez F, Andres AM, Lopez-Santamaria M.

Curr Opin Organ Transplant. 2018 Apr;23(2):207-211. doi: 10.1097/MOT.0000000000000508. Review.

PMID:
29406449
22.

A high-coverage Neandertal genome from Vindija Cave in Croatia.

Prüfer K, de Filippo C, Grote S, Mafessoni F, Korlević P, Hajdinjak M, Vernot B, Skov L, Hsieh P, Peyrégne S, Reher D, Hopfe C, Nagel S, Maricic T, Fu Q, Theunert C, Rogers R, Skoglund P, Chintalapati M, Dannemann M, Nelson BJ, Key FM, Rudan P, Kućan Ž, Gušić I, Golovanova LV, Doronichev VB, Patterson N, Reich D, Eichler EE, Slatkin M, Schierup MH, Andrés AM, Kelso J, Meyer M, Pääbo S.

Science. 2017 Nov 3;358(6363):655-658. doi: 10.1126/science.aao1887. Epub 2017 Oct 5.

23.
24.

Endocrine disruptors induce perturbations in endoplasmic reticulum and mitochondria of human pluripotent stem cell derivatives.

Rajamani U, Gross AR, Ocampo C, Andres AM, Gottlieb RA, Sareen D.

Nat Commun. 2017 Aug 9;8(1):219. doi: 10.1038/s41467-017-00254-8. Retraction in: Nat Commun. 2019 Feb 2;10(1):645.

25.

Mitochondrial function in engineered cardiac tissues is regulated by extracellular matrix elasticity and tissue alignment.

Lyra-Leite DM, Andres AM, Petersen AP, Ariyasinghe NR, Cho N, Lee JA, Gottlieb RA, McCain ML.

Am J Physiol Heart Circ Physiol. 2017 Oct 1;313(4):H757-H767. doi: 10.1152/ajpheart.00290.2017. Epub 2017 Jul 21.

26.

Exercise reestablishes autophagic flux and mitochondrial quality control in heart failure.

Campos JC, Queliconi BB, Bozi LHM, Bechara LRG, Dourado PMM, Andres AM, Jannig PR, Gomes KMS, Zambelli VO, Rocha-Resende C, Guatimosim S, Brum PC, Mochly-Rosen D, Gottlieb RA, Kowaltowski AJ, Ferreira JCB.

Autophagy. 2017 Aug 3;13(8):1304-1317. doi: 10.1080/15548627.2017.1325062.

27.

Mitophagy and mitochondrial biogenesis in atrial tissue of patients undergoing heart surgery with cardiopulmonary bypass.

Andres AM, Tucker KC, Thomas A, Taylor DJ, Sengstock D, Jahania SM, Dabir R, Pourpirali S, Brown JA, Westbrook DG, Ballinger SW, Mentzer RM Jr, Gottlieb RA.

JCI Insight. 2017 Feb 23;2(4):e89303. doi: 10.1172/jci.insight.89303.

28.

Natural Selection in the Great Apes.

Cagan A, Theunert C, Laayouni H, Santpere G, Pybus M, Casals F, Prüfer K, Navarro A, Marques-Bonet T, Bertranpetit J, Andrés AM.

Mol Biol Evol. 2016 Dec;33(12):3268-3283. Epub 2016 Oct 30.

29.

Chimpanzee genomic diversity reveals ancient admixture with bonobos.

de Manuel M, Kuhlwilm M, Frandsen P, Sousa VC, Desai T, Prado-Martinez J, Hernandez-Rodriguez J, Dupanloup I, Lao O, Hallast P, Schmidt JM, Heredia-Genestar JM, Benazzo A, Barbujani G, Peter BM, Kuderna LF, Casals F, Angedakin S, Arandjelovic M, Boesch C, Kühl H, Vigilant L, Langergraber K, Novembre J, Gut M, Gut I, Navarro A, Carlsen F, Andrés AM, Siegismund HR, Scally A, Excoffier L, Tyler-Smith C, Castellano S, Xue Y, Hvilsom C, Marques-Bonet T.

Science. 2016 Oct 28;354(6311):477-481. Epub 2016 Oct 27.

30.

Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions.

Lobon I, Tucci S, de Manuel M, Ghirotto S, Benazzo A, Prado-Martinez J, Lorente-Galdos B, Nam K, Dabad M, Hernandez-Rodriguez J, Comas D, Navarro A, Schierup MH, Andres AM, Barbujani G, Hvilsom C, Marques-Bonet T.

Genome Biol Evol. 2016 Jul 3;8(6):2020-30. doi: 10.1093/gbe/evw124.

31.

Discordant signaling and autophagy response to fasting in hearts of obese mice: Implications for ischemia tolerance.

Andres AM, Kooren JA, Parker SJ, Tucker KC, Ravindran N, Ito BR, Huang C, Venkatraman V, Van Eyk JE, Gottlieb RA, Mentzer RM Jr.

Am J Physiol Heart Circ Physiol. 2016 Jul 1;311(1):H219-28. doi: 10.1152/ajpheart.00041.2016. Epub 2016 May 6.

32.

Difficulties, guidelines and review of developing an acute rejection model after rat intestinal transplantation.

Andres AM, Santamaria M, Hernandez-Oliveros F, Guerra L, Lopez S, Stringa P, Vallejo MT, Largo C, Encinas JL, Garcia de Las Heras MS, Lopez-Santamaria M, Tovar JA.

Transpl Immunol. 2016 May;36:32-41. doi: 10.1016/j.trim.2016.04.003. Epub 2016 Apr 19.

PMID:
27102447
33.

Human adaptation and population differentiation in the light of ancient genomes.

Key FM, Fu Q, Romagné F, Lachmann M, Andrés AM.

Nat Commun. 2016 Mar 18;7:10775. doi: 10.1038/ncomms10775.

34.

Ancient gene flow from early modern humans into Eastern Neanderthals.

Kuhlwilm M, Gronau I, Hubisz MJ, de Filippo C, Prado-Martinez J, Kircher M, Fu Q, Burbano HA, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajkovic D, Kucan Ž, Gušic I, Marques-Bonet T, Andrés AM, Viola B, Pääbo S, Meyer M, Siepel A, Castellano S.

Nature. 2016 Feb 25;530(7591):429-33. doi: 10.1038/nature16544. Epub 2016 Feb 17.

35.

Erratum: Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors.

Dannemann M, Andrés AM, Kelso J.

Am J Hum Genet. 2016 Feb 4;98(2):399. doi: 10.1016/j.ajhg.2016.01.012.

36.

Recent Selection Changes in Human Genes under Long-Term Balancing Selection.

de Filippo C, Key FM, Ghirotto S, Benazzo A, Meneu JR, Weihmann A; NISC Comparative Sequence Program, Parra G, Green ED, Andrés AM.

Mol Biol Evol. 2016 Jun;33(6):1435-47. doi: 10.1093/molbev/msw023. Epub 2016 Feb 1.

37.

Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors.

Dannemann M, Andrés AM, Kelso J.

Am J Hum Genet. 2016 Jan 7;98(1):22-33. doi: 10.1016/j.ajhg.2015.11.015. Erratum in: Am J Hum Genet. 2016 Feb 4;98(2):399. Erratum in: Am J Hum Genet. 2016 Feb 4;98(2):399.

38.

Mitophagy is required for mitochondrial biogenesis and myogenic differentiation of C2C12 myoblasts.

Sin J, Andres AM, Taylor DJ, Weston T, Hiraumi Y, Stotland A, Kim BJ, Huang C, Doran KS, Gottlieb RA.

Autophagy. 2016;12(2):369-80. doi: 10.1080/15548627.2015.1115172.

39.

Surgical Rehabilitation Techniques in Children with Poor Prognosis Short Bowel Syndrome.

Dore M, Junco PT, Andres AM, Sánchez-Galán A, Amesty MV, Ramos E, Prieto G, Hernandez F, Lopez Santamaria M.

Eur J Pediatr Surg. 2016 Feb;26(1):112-6. doi: 10.1055/s-0035-1567805. Epub 2015 Nov 4.

PMID:
26535775
40.

Congenital Portosystemic Shunts: Clinic Heterogeneity Requires an Individual Management of the Patient.

Chocarro G, Amesty MV, Encinas JL, Vilanova Sánchez A, Hernandez F, Andres AM, Gamez M, Tovar JA, Lopez Santamaria M.

Eur J Pediatr Surg. 2016 Feb;26(1):74-80. doi: 10.1055/s-0035-1566097. Epub 2015 Nov 3.

PMID:
26528850
41.

Genetic adaptation to levels of dietary selenium in recent human history.

White L, Romagné F, Müller E, Erlebach E, Weihmann A, Parra G, Andrés AM, Castellano S.

Mol Biol Evol. 2015 Jun;32(6):1507-18. doi: 10.1093/molbev/msv043. Epub 2015 Mar 3.

PMID:
25739735
42.

Untangling autophagy measurements: all fluxed up.

Gottlieb RA, Andres AM, Sin J, Taylor DP.

Circ Res. 2015 Jan 30;116(3):504-14. doi: 10.1161/CIRCRESAHA.116.303787. Review.

43.

Long-Term Balancing Selection in LAD1 Maintains a Missense Trans-Species Polymorphism in Humans, Chimpanzees, and Bonobos.

Teixeira JC, de Filippo C, Weihmann A, Meneu JR, Racimo F, Dannemann M, Nickel B, Fischer A, Halbwax M, Andre C, Atencia R, Meyer M, Parra G, Pääbo S, Andrés AM.

Mol Biol Evol. 2015 May;32(5):1186-96. doi: 10.1093/molbev/msv007. Epub 2015 Jan 19.

PMID:
25605789
44.

Editorial overview: genetics of human evolution: the genetics of human origins.

Andrés AM, Nowick K.

Curr Opin Genet Dev. 2014 Dec;29:v-vii. No abstract available.

PMID:
25468516
45.

A time to reap, a time to sow: mitophagy and biogenesis in cardiac pathophysiology.

Andres AM, Stotland A, Queliconi BB, Gottlieb RA.

J Mol Cell Cardiol. 2015 Jan;78:62-72. doi: 10.1016/j.yjmcc.2014.10.003. Epub 2014 Oct 16. Review.

46.

Ulcerative ileitis after proctocolectomy in children: a complication of ulcerative colitis or a disease in itself after ileoanal pullthrough?

Sánchez-Galán A, Andres AM, Fernández-Caamaño B, Vilanova A, Dominguez E, Ortiz R, Prieto G, Lopez-Santamaria M, Tovar JA.

Eur J Pediatr Surg. 2015 Feb;25(1):e1. doi: 10.1055/s-0034-1394279. Epub 2014 Oct 26. No abstract available.

PMID:
25344938
47.

Selection on a variant associated with improved viral clearance drives local, adaptive pseudogenization of interferon lambda 4 (IFNL4).

Key FM, Peter B, Dennis MY, Huerta-Sánchez E, Tang W, Prokunina-Olsson L, Nielsen R, Andrés AM.

PLoS Genet. 2014 Oct 16;10(10):e1004681. doi: 10.1371/journal.pgen.1004681. eCollection 2014 Oct. Erratum in: PLoS Genet. 2014 Nov;10(11):e1004882.

48.

Measuring cardiac autophagic flux in vitro and in vivo.

Gurney MA, Huang C, Ramil JM, Ravindran N, Andres AM, Sin J, Linton PJ, Gottlieb RA.

Methods Mol Biol. 2015;1219:187-97. doi: 10.1007/978-1-4939-1661-0_14.

PMID:
25308270
49.

Health-related quality of life in pediatric intestinal transplantation.

Andres AM, Alameda A, Mayoral O, Hernandez F, Dominguez E, Martinez Ojinaga E, Ramos E, Prieto G, Lopez Santamaría M, Tovar JA.

Pediatr Transplant. 2014 Nov;18(7):746-56. doi: 10.1111/petr.12348. Epub 2014 Sep 2.

PMID:
25180826
50.

Advantageous diversity maintained by balancing selection in humans.

Key FM, Teixeira JC, de Filippo C, Andrés AM.

Curr Opin Genet Dev. 2014 Dec;29:45-51. doi: 10.1016/j.gde.2014.08.001. Epub 2014 Aug 29. Review.

PMID:
25173959

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