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Items: 1 to 50 of 58

1.

octoFLU: Automated Classification for the Evolutionary Origin of Influenza A Virus Gene Sequences Detected in U.S. Swine.

Chang J, Anderson TK, Zeller MA, Gauger PC, Vincent AL.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00673-19. doi: 10.1128/MRA.00673-19.

2.

Complete Genome Sequences of Two Novel Human-Like H3N2 Influenza A Viruses, A/swine/Oklahoma/65980/2017 (H3N2) and A/Swine/Oklahoma/65260/2017 (H3N2), Detected in Swine in the United States.

Zeller MA, Li G, Harmon KM, Zhang J, Vincent AL, Anderson TK, Gauger PC.

Microbiol Resour Announc. 2018 Nov 21;7(20). pii: e01203-18. doi: 10.1128/MRA.01203-18. eCollection 2018 Nov.

3.

ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine.

Zeller MA, Anderson TK, Walia RW, Vincent AL, Gauger PC.

BMC Bioinformatics. 2018 Nov 1;19(1):397. doi: 10.1186/s12859-018-2408-7.

4.

Antigenic evolution of H3N2 influenza A viruses in swine in the United States from 2012 to 2016.

Bolton MJ, Abente EJ, Venkatesh D, Stratton JA, Zeller M, Anderson TK, Lewis NS, Vincent AL.

Influenza Other Respir Viruses. 2019 Jan;13(1):83-90. doi: 10.1111/irv.12610. Epub 2018 Oct 7.

5.

Selective constraint and adaptive potential of West Nile virus within and among naturally infected avian hosts and mosquito vectors.

Nelson CW, Sibley SD, Kolokotronis SO, Hamer GL, Newman CM, Anderson TK, Walker ED, Kitron UD, Brawn JD, Ruiz MO, Goldberg TL.

Virus Evol. 2018 Jun 12;4(1):vey013. doi: 10.1093/ve/vey013. eCollection 2018 Jan.

6.

Regional patterns of genetic diversity in swine influenza A viruses in the United States from 2010 to 2016.

Walia RR, Anderson TK, Vincent AL.

Influenza Other Respir Viruses. 2019 May;13(3):262-273. doi: 10.1111/irv.12559. Epub 2019 Feb 13.

7.

Antigenic and genetic evolution of contemporary swine H1 influenza viruses in the United States.

Rajao DS, Anderson TK, Kitikoon P, Stratton J, Lewis NS, Vincent AL.

Virology. 2018 May;518:45-54. doi: 10.1016/j.virol.2018.02.006. Epub 2018 Feb 16.

8.

Porcine reproductive and respiratory disease virus: Evolution and recombination yields distinct ORF5 RFLP 1-7-4 viruses with individual pathogenicity.

van Geelen AGM, Anderson TK, Lager KM, Das PB, Otis NJ, Montiel NA, Miller LC, Kulshreshtha V, Buckley AC, Brockmeier SL, Zhang J, Gauger PC, Harmon KM, Faaberg KS.

Virology. 2018 Jan 1;513:168-179. doi: 10.1016/j.virol.2017.10.002. Epub 2017 Nov 5.

9.

Influenza A(H3N2) Virus in Swine at Agricultural Fairs and Transmission to Humans, Michigan and Ohio, USA, 2016.

Bowman AS, Walia RR, Nolting JM, Vincent AL, Killian ML, Zentkovich MM, Lorbach JN, Lauterbach SE, Anderson TK, Davis CT, Zanders N, Jones J, Jang Y, Lynch B, Rodriguez MR, Blanton L, Lindstrom SE, Wentworth DE, Schiltz J, Averill JJ, Forshey T.

Emerg Infect Dis. 2017 Sep;23(9):1551-1555. doi: 10.3201/eid2309.170847.

10.

The genomic evolution of H1 influenza A viruses from swine detected in the United States between 2009 and 2016.

Gao S, Anderson TK, Walia RR, Dorman KS, Janas-Martindale A, Vincent AL.

J Gen Virol. 2017 Aug;98(8):2001-2010. doi: 10.1099/jgv.0.000885. Epub 2017 Jul 31.

11.

Culex Flavivirus During West Nile Virus Epidemic and Interepidemic Years in Chicago, United States.

Newman CM, Krebs BL, Anderson TK, Hamer GL, Ruiz MO, Brawn JD, Brown WM, Kitron UD, Goldberg TL.

Vector Borne Zoonotic Dis. 2017 Aug;17(8):567-575. doi: 10.1089/vbz.2017.2124. Epub 2017 Jun 19.

12.

A highly pathogenic avian-derived influenza virus H5N1 with 2009 pandemic H1N1 internal genes demonstrates increased replication and transmission in pigs.

Abente EJ, Kitikoon P, Lager KM, Gauger PC, Anderson TK, Vincent AL.

J Gen Virol. 2017 Jan;98(1):18-30. doi: 10.1099/jgv.0.000678.

PMID:
28206909
13.

A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses.

Anderson TK, Macken CA, Lewis NS, Scheuermann RH, Van Reeth K, Brown IH, Swenson SL, Simon G, Saito T, Berhane Y, Ciacci-Zanella J, Pereda A, Davis CT, Donis RO, Webby RJ, Vincent AL.

mSphere. 2016 Dec 14;1(6). pii: e00275-16. eCollection 2016 Nov-Dec.

14.

Influenza A virus vaccines for swine.

Vincent AL, Perez DR, Rajao D, Anderson TK, Abente EJ, Walia RR, Lewis NS.

Vet Microbiol. 2017 Jul;206:35-44. doi: 10.1016/j.vetmic.2016.11.026. Epub 2016 Nov 24.

PMID:
27923501
15.

Influenza Research Database: An integrated bioinformatics resource for influenza virus research.

Zhang Y, Aevermann BD, Anderson TK, Burke DF, Dauphin G, Gu Z, He S, Kumar S, Larsen CN, Lee AJ, Li X, Macken C, Mahaffey C, Pickett BE, Reardon B, Smith T, Stewart L, Suloway C, Sun G, Tong L, Vincent AL, Walters B, Zaremba S, Zhao H, Zhou L, Zmasek C, Klem EB, Scheuermann RH.

Nucleic Acids Res. 2017 Jan 4;45(D1):D466-D474. doi: 10.1093/nar/gkw857. Epub 2016 Sep 26.

16.

The Molecular Determinants of Antibody Recognition and Antigenic Drift in the H3 Hemagglutinin of Swine Influenza A Virus.

Abente EJ, Santos J, Lewis NS, Gauger PC, Stratton J, Skepner E, Anderson TK, Rajao DS, Perez DR, Vincent AL.

J Virol. 2016 Aug 26;90(18):8266-80. doi: 10.1128/JVI.01002-16. Print 2016 Sep 15.

17.

Effect of Trapping Methods, Weather, and Landscape on Estimates of the Culex Vector Mosquito Abundance.

Karki S, Hamer GL, Anderson TK, Goldberg TL, Kitron UD, Krebs BL, Walker ED, Ruiz MO.

Environ Health Insights. 2016 Jun 22;10:93-103. doi: 10.4137/EHI.S33384. eCollection 2016.

18.

The global antigenic diversity of swine influenza A viruses.

Lewis NS, Russell CA, Langat P, Anderson TK, Berger K, Bielejec F, Burke DF, Dudas G, Fonville JM, Fouchier RA, Kellam P, Koel BF, Lemey P, Nguyen T, Nuansrichy B, Peiris JM, Saito T, Simon G, Skepner E, Takemae N; ESNIP3 consortium, Webby RJ, Van Reeth K, Brookes SM, Larsen L, Watson SJ, Brown IH, Vincent AL.

Elife. 2016 Apr 15;5:e12217. doi: 10.7554/eLife.12217.

19.

The avian-origin H3N2 canine influenza virus that recently emerged in the United States has limited replication in swine.

Abente EJ, Anderson TK, Rajao DS, Swenson S, Gauger PC, Vincent AL.

Influenza Other Respir Viruses. 2016 Sep;10(5):429-32. doi: 10.1111/irv.12395. Epub 2016 May 18.

20.

Decreased Flight Activity in Culex pipiens (Diptera: Culicidae) Naturally Infected With Culex flavivirus.

Newman CM, Anderson TK, Goldberg TL.

J Med Entomol. 2016 Jan;53(1):233-6. doi: 10.1093/jme/tjv161. Epub 2015 Oct 27.

21.

Novel Reassortant Human-Like H3N2 and H3N1 Influenza A Viruses Detected in Pigs Are Virulent and Antigenically Distinct from Swine Viruses Endemic to the United States.

Raj√£o DS, Gauger PC, Anderson TK, Lewis NS, Abente EJ, Killian ML, Perez DR, Sutton TC, Zhang J, Vincent AL.

J Virol. 2015 Nov;89(22):11213-22. doi: 10.1128/JVI.01675-15. Epub 2015 Aug 26.

22.

WEST NILE VIRUS ANTIBODY DECAY RATE IN FREE-RANGING BIRDS.

McKee EM, Walker ED, Anderson TK, Kitron UD, Brawn JD, Krebs BL, Newman C, Ruiz MO, Levine RS, Carrington ME, McLean RG, Goldberg TL, Hamer GL.

J Wildl Dis. 2015 Jul;51(3):601-8. doi: 10.7589/2014-07-175. Epub 2015 Apr 28.

PMID:
25919465
23.

Characterization of co-circulating swine influenza A viruses in North America and the identification of a novel H1 genetic clade with antigenic significance.

Anderson TK, Campbell BA, Nelson MI, Lewis NS, Janas-Martindale A, Killian ML, Vincent AL.

Virus Res. 2015 Apr 2;201:24-31. doi: 10.1016/j.virusres.2015.02.009. Epub 2015 Feb 18.

PMID:
25701742
24.

Comparative virulence of wild-type H1N1pdm09 influenza A isolates in swine.

Henningson JN, Rajao DS, Kitikoon P, Lorusso A, Culhane MR, Lewis NS, Anderson TK, Vincent AL.

Vet Microbiol. 2015 Mar 23;176(1-2):40-9. doi: 10.1016/j.vetmic.2014.12.021. Epub 2014 Dec 31.

PMID:
25601799
25.

Host group formation decreases exposure to vector-borne disease: a field experiment in a 'hotspot' of West Nile virus transmission.

Krebs BL, Anderson TK, Goldberg TL, Hamer GL, Kitron UD, Newman CM, Ruiz MO, Walker ED, Brawn JD.

Proc Biol Sci. 2014 Dec 7;281(1796):20141586. doi: 10.1098/rspb.2014.1586.

26.

Broad protection against avian influenza virus by using a modified vaccinia Ankara virus expressing a mosaic hemagglutinin gene.

Kamlangdee A, Kingstad-Bakke B, Anderson TK, Goldberg TL, Osorio JE.

J Virol. 2014 Nov;88(22):13300-9. doi: 10.1128/JVI.01532-14. Epub 2014 Sep 10.

27.

An inverse association between West Nile virus serostatus and avian malaria infection status.

Medeiros MC, Anderson TK, Higashiguchi JM, Kitron UD, Walker ED, Brawn JD, Krebs BL, Ruiz MO, Goldberg TL, Ricklefs RE, Hamer GL.

Parasit Vectors. 2014 Sep 1;7:415. doi: 10.1186/1756-3305-7-415.

28.

Pathogenesis and vaccination of influenza A virus in swine.

Rajao DS, Anderson TK, Gauger PC, Vincent AL.

Curr Top Microbiol Immunol. 2014;385:307-26. doi: 10.1007/82_2014_391. Review.

PMID:
25033752
29.

A brief introduction to influenza A virus in swine.

Vincent AL, Lager KM, Anderson TK.

Methods Mol Biol. 2014;1161:243-58. doi: 10.1007/978-1-4939-0758-8_20. Review.

PMID:
24899434
30.

Dispersal of adult culex mosquitoes in an urban west nile virus hotspot: a mark-capture study incorporating stable isotope enrichment of natural larval habitats.

Hamer GL, Anderson TK, Donovan DJ, Brawn JD, Krebs BL, Gardner AM, Ruiz MO, Brown WM, Kitron UD, Newman CM, Goldberg TL, Walker ED.

PLoS Negl Trop Dis. 2014 Mar 27;8(3):e2768. doi: 10.1371/journal.pntd.0002768. eCollection 2014 Mar.

31.

Prevalence of filarioid nematodes and trypanosomes in American robins and house sparrows, Chicago USA.

Hamer GL, Anderson TK, Berry GE, Makohon-Moore AP, Crafton JC, Brawn JD, Dolinski AC, Krebs BL, Ruiz MO, Muzzall PM, Goldberg TL, Walker ED.

Int J Parasitol Parasites Wildl. 2012 Dec 12;2:42-9. doi: 10.1016/j.ijppaw.2012.11.005. eCollection 2013 Dec.

32.

Substitutions near the hemagglutinin receptor-binding site determine the antigenic evolution of influenza A H3N2 viruses in U.S. swine.

Lewis NS, Anderson TK, Kitikoon P, Skepner E, Burke DF, Vincent AL.

J Virol. 2014 May;88(9):4752-63. doi: 10.1128/JVI.03805-13. Epub 2014 Feb 12.

33.

Population dynamics of cocirculating swine influenza A viruses in the United States from 2009 to 2012.

Anderson TK, Nelson MI, Kitikoon P, Swenson SL, Korslund JA, Vincent AL.

Influenza Other Respir Viruses. 2013 Dec;7 Suppl 4:42-51. doi: 10.1111/irv.12193.

34.

Swine influenza virus vaccine serologic cross-reactivity to contemporary US swine H3N2 and efficacy in pigs infected with an H3N2 similar to 2011-2012 H3N2v.

Kitikoon P, Gauger PC, Anderson TK, Culhane MR, Swenson S, Loving CL, Perez DR, Vincent AL.

Influenza Other Respir Viruses. 2013 Dec;7 Suppl 4:32-41. doi: 10.1111/irv.12189.

36.

Efficacy in pigs of inactivated and live attenuated influenza virus vaccines against infection and transmission of an emerging H3N2 similar to the 2011-2012 H3N2v.

Loving CL, Lager KM, Vincent AL, Brockmeier SL, Gauger PC, Anderson TK, Kitikoon P, Perez DR, Kehrli ME Jr.

J Virol. 2013 Sep;87(17):9895-903. doi: 10.1128/JVI.01038-13. Epub 2013 Jul 3.

37.

Qualitative community stability determines parasite establishment and richness in estuarine marshes.

Anderson TK, Sukhdeo MV.

PeerJ. 2013 Jun 18;1:e92. doi: 10.7717/peerj.92. Print 2013.

38.
39.

Genotype patterns of contemporary reassorted H3N2 virus in US swine.

Kitikoon P, Nelson MI, Killian ML, Anderson TK, Koster L, Culhane MR, Vincent AL.

J Gen Virol. 2013 Jun;94(Pt 6):1236-41. doi: 10.1099/vir.0.51839-0.

PMID:
23695819
40.

Terrestrial vegetation and aquatic chemistry influence larval mosquito abundance in catch basins, Chicago, USA.

Gardner AM, Anderson TK, Hamer GL, Johnson DE, Varela KE, Walker ED, Ruiz MO.

Parasit Vectors. 2013 Jan 11;6:9. doi: 10.1186/1756-3305-6-9.

41.

The relationship between community species richness and the richness of the parasite community in Fundulus heteroclitus.

Anderson TK, Sukhdeo MV.

J Parasitol. 2013 Jun;99(3):391-6. doi: 10.1645/GE-2940.1. Epub 2012 Nov 30.

PMID:
23198795
42.

Wild birds and urban ecology of ticks and tick-borne pathogens, Chicago, Illinois, USA, 2005-2010.

Hamer SA, Goldberg TL, Kitron UD, Brawn JD, Anderson TK, Loss SR, Walker ED, Hamer GL.

Emerg Infect Dis. 2012 Oct;18(10):1589-95. doi: 10.3201/eid1810.120511.

43.

Ranking viruses: measures of positional importance within networks define core viruses for rational polyvalent vaccine development.

Anderson TK, Laegreid WW, Cerutti F, Osorio FA, Nelson EA, Christopher-Hennings J, Goldberg TL.

Bioinformatics. 2012 Jun 15;28(12):1624-32. doi: 10.1093/bioinformatics/bts181. Epub 2012 Apr 11.

PMID:
22495748
44.

Host centrality in food web networks determines parasite diversity.

Anderson TK, Sukhdeo MV.

PLoS One. 2011;6(10):e26798. doi: 10.1371/journal.pone.0026798. Epub 2011 Oct 25.

45.

Fine-scale variation in vector host use and force of infection drive localized patterns of West Nile virus transmission.

Hamer GL, Chaves LF, Anderson TK, Kitron UD, Brawn JD, Ruiz MO, Loss SR, Walker ED, Goldberg TL.

PLoS One. 2011;6(8):e23767. doi: 10.1371/journal.pone.0023767. Epub 2011 Aug 19.

46.

Culex flavivirus and West Nile virus mosquito coinfection and positive ecological association in Chicago, United States.

Newman CM, Cerutti F, Anderson TK, Hamer GL, Walker ED, Kitron UD, Ruiz MO, Brawn JD, Goldberg TL.

Vector Borne Zoonotic Dis. 2011 Aug;11(8):1099-105. doi: 10.1089/vbz.2010.0144. Epub 2011 Jan 22.

47.

West Nile virus may have hitched a ride across the Western United States on Culex tarsalis mosquitoes.

Goldberg TL, Anderson TK, Hamer GL.

Mol Ecol. 2010 Apr;19(8):1518-9. doi: 10.1111/j.1365-294X.2010.04578.x.

PMID:
20456236
48.

Abiotic versus biotic hierarchies in the assembly of parasite populations.

Anderson TK, Sukhdeo MV.

Parasitology. 2010 Apr;137(4):743-54. doi: 10.1017/S0031182009991430. Epub 2009 Dec 22.

PMID:
20025818
49.
50.

Kernel density estimation and K-means clustering to profile road accident hotspots.

Anderson TK.

Accid Anal Prev. 2009 May;41(3):359-64. doi: 10.1016/j.aap.2008.12.014. Epub 2009 Jan 23.

PMID:
19393780

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