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Items: 36

1.

Dynamic Patterns of Transcript Abundance of Transposable Element Families in Maize.

Anderson SN, Stitzer MC, Zhou P, Ross-Ibarra J, Hirsch CD, Springer NM.

G3 (Bethesda). 2019 Sep 10. pii: g3.400431.2019. doi: 10.1534/g3.119.400431. [Epub ahead of print]

2.

Monitoring the interplay between transposable element families and DNA methylation in maize.

Noshay JM, Anderson SN, Zhou P, Ji L, Ricci W, Lu Z, Stitzer MC, Crisp PA, Hirsch CN, Zhang X, Schmitz RJ, Springer NM.

PLoS Genet. 2019 Sep 9;15(9):e1008291. doi: 10.1371/journal.pgen.1008291. [Epub ahead of print]

3.

Transposable elements contribute to dynamic genome content in maize.

Anderson SN, Stitzer MC, Brohammer AB, Zhou P, Noshay JM, O'Connor CH, Hirsch CD, Ross-Ibarra J, Hirsch CN, Springer NM.

Plant J. 2019 Aug 5. doi: 10.1111/tpj.14489. [Epub ahead of print]

PMID:
31381222
4.

Hybrid Decay: A Transgenerational Epigenetic Decline in Vigor and Viability Triggered in Backcross Populations of Teosinte with Maize.

Xue W, Anderson SN, Wang X, Yang L, Crisp PA, Li Q, Noshay J, Albert PS, Birchler JA, Bilinski P, Stitzer MC, Ross-Ibarra J, Flint-Garcia S, Chen X, Springer NM, Doebley JF.

Genetics. 2019 Sep;213(1):143-160. doi: 10.1534/genetics.119.302378. Epub 2019 Jul 18.

5.

Opportunities to Use DNA Methylation to Distil Functional Elements in Large Crop Genomes.

Crisp PA, Noshay JM, Anderson SN, Springer NM.

Mol Plant. 2019 Mar 4;12(3):282-284. doi: 10.1016/j.molp.2019.02.006. Epub 2019 Feb 22. No abstract available.

PMID:
30797889
6.

The maize W22 genome provides a foundation for functional genomics and transposon biology.

Springer NM, Anderson SN, Andorf CM, Ahern KR, Bai F, Barad O, Barbazuk WB, Bass HW, Baruch K, Ben-Zvi G, Buckler ES, Bukowski R, Campbell MS, Cannon EKS, Chomet P, Dawe RK, Davenport R, Dooner HK, Du LH, Du C, Easterling KA, Gault C, Guan JC, Hunter CT, Jander G, Jiao Y, Koch KE, Kol G, K├Âllner TG, Kudo T, Li Q, Lu F, Mayfield-Jones D, Mei W, McCarty DR, Noshay JM, Portwood JL 2nd, Ronen G, Settles AM, Shem-Tov D, Shi J, Soifer I, Stein JC, Stitzer MC, Suzuki M, Vera DL, Vollbrecht E, Vrebalov JT, Ware D, Wei S, Wimalanathan K, Woodhouse MR, Xiong W, Brutnell TP.

Nat Genet. 2018 Sep;50(9):1282-1288. doi: 10.1038/s41588-018-0158-0. Epub 2018 Jul 30.

PMID:
30061736
7.

Mitochondrial-Localized Versus Cytosolic Intracellular CO-Releasing Organic PhotoCORMs: Evaluation of CO Effects Using Bioenergetics.

Soboleva T, Esquer HJ, Anderson SN, Berreau LM, Benninghoff AD.

ACS Chem Biol. 2018 Aug 17;13(8):2220-2228. doi: 10.1021/acschembio.8b00387. Epub 2018 Jul 5.

8.

Subtle Perturbations of the Maize Methylome Reveal Genes and Transposons Silenced by Chromomethylase or RNA-Directed DNA Methylation Pathways.

Anderson SN, Zynda GJ, Song J, Han Z, Vaughn MW, Li Q, Springer NM.

G3 (Bethesda). 2018 May 31;8(6):1921-1932. doi: 10.1534/g3.118.200284.

9.

Potential roles for transposable elements in creating imprinted expression.

Anderson SN, Springer NM.

Curr Opin Genet Dev. 2018 Apr;49:8-14. doi: 10.1016/j.gde.2018.01.008. Epub 2018 Feb 13. Review.

PMID:
29453082
10.

The Zygotic Transition Is Initiated in Unicellular Plant Zygotes with Asymmetric Activation of Parental Genomes.

Anderson SN, Johnson CS, Chesnut J, Jones DS, Khanday I, Woodhouse M, Li C, Conrad LJ, Russell SD, Sundaresan V.

Dev Cell. 2017 Nov 6;43(3):349-358.e4. doi: 10.1016/j.devcel.2017.10.005.

11.

Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize.

Oka R, Zicola J, Weber B, Anderson SN, Hodgman C, Gent JI, Wesselink JJ, Springer NM, Hoefsloot HCJ, Turck F, Stam M.

Genome Biol. 2017 Jul 21;18(1):137. doi: 10.1186/s13059-017-1273-4.

12.

Solution or solid - it doesn't matter: visible light-induced CO release reactivity of zinc flavonolato complexes.

Anderson SN, Larson MT, Berreau LM.

Dalton Trans. 2016 Sep 20;45(37):14570-14580.

PMID:
27711794
13.

A Structurally-Tunable 3-Hydroxyflavone Motif for Visible Light-Induced Carbon Monoxide-Releasing Molecules (CORMs).

Anderson SN, Richards JM, Esquer HJ, Benninghoff AD, Arif AM, Berreau LM.

ChemistryOpen. 2015 Oct;4(5):590-4. doi: 10.1002/open.201500167. Epub 2015 Jul 29.

14.

The effects of hypoxia and temperature on metabolic aspects of embryonic development in the annual killifish Austrofundulus limnaeus.

Anderson SN, Podrabsky JE.

J Comp Physiol B. 2014 Apr;184(3):355-70. doi: 10.1007/s00360-014-0803-6. Epub 2014 Feb 8.

PMID:
24510219
15.

Transcriptomes of isolated Oryza sativa gametes characterized by deep sequencing: evidence for distinct sex-dependent chromatin and epigenetic states before fertilization.

Anderson SN, Johnson CS, Jones DS, Conrad LJ, Gou X, Russell SD, Sundaresan V.

Plant J. 2013 Dec;76(5):729-41. doi: 10.1111/tpj.12336. Epub 2013 Nov 11.

16.

A high-throughput soft agar assay for identification of anticancer compound.

Anderson SN, Towne DL, Burns DJ, Warrior U.

J Biomol Screen. 2007 Oct;12(7):938-45.

PMID:
17942786
17.

Discovery of a novel small molecule binding site of human survivin.

Wendt MD, Sun C, Kunzer A, Sauer D, Sarris K, Hoff E, Yu L, Nettesheim DG, Chen J, Jin S, Comess KM, Fan Y, Anderson SN, Isaac B, Olejniczak ET, Hajduk PJ, Rosenberg SH, Elmore SW.

Bioorg Med Chem Lett. 2007 Jun 1;17(11):3122-9. Epub 2007 Mar 16.

PMID:
17391963
18.

Compound transfer efficiency from polystyrene surfaces: application to microarrayed compound screening.

Cheng X, Yan B, Gao L, Tang H, Fan Y, Anderson SN, Affleck R, Burns DJ.

J Biomol Screen. 2005 Jun;10(4):293-303.

PMID:
15964930
19.

Polyphosphoinositides suppress the adhesion of Haemophilus influenzae to pharyngeal cells.

Liu JW, Anderson SN, Meulbroek JA, Hwang SM, Mukerji P, Huang YS.

Lipids Health Dis. 2004 Sep 3;3:20.

20.

Microarrayed compound screening (microARCS) to identify activators and inhibitors of AMP-activated protein kinase.

Anderson SN, Cool BL, Kifle L, Chiou W, Egan DA, Barrett LW, Richardson PL, Frevert EU, Warrior U, Kofron JL, Burns DJ.

J Biomol Screen. 2004 Mar;9(2):112-21.

PMID:
15006134
21.

Treatment of postmastectomy lymphedema with low-level laser therapy: a double blind, placebo-controlled trial.

Carati CJ, Anderson SN, Gannon BJ, Piller NB.

Cancer. 2003 Sep 15;98(6):1114-22. Erratum in: Cancer. 2003 Dec 15;98(12):2742.

22.

Transforming growth factor beta mimetics: discovery of 7-[4-(4-cyanophenyl)phenoxy]-heptanohydroxamic acid, a biaryl hydroxamate inhibitor of histone deacetylase.

Glaser KB, Li J, Aakre ME, Morgan DW, Sheppard G, Stewart KD, Pollock J, Lee P, O'Connor CZ, Anderson SN, Mussatto DJ, Wegner CW, Moses HL.

Mol Cancer Ther. 2002 Aug;1(10):759-68.

23.

Is patients' perception of time spent with the physician a determinant of ambulatory patient satisfaction?

Lin CT, Albertson GA, Schilling LM, Cyran EM, Anderson SN, Ware L, Anderson RJ.

Arch Intern Med. 2001 Jun 11;161(11):1437-42.

PMID:
11386893
24.

Simulated car crashes at intersections in drivers with Alzheimer disease.

Rizzo M, McGehee DV, Dawson JD, Anderson SN.

Alzheimer Dis Assoc Disord. 2001 Jan-Mar;15(1):10-20.

PMID:
11236820
25.

Modulation of cholesterol concentration in Caco-2 cells by incubation with different n-6 fatty acids.

Koba K, Liu JW, Chuang LT, Anderson SN, Bowman T, Bobik E Jr, Sugano M, Huang YS.

Biosci Biotechnol Biochem. 2000 Dec;64(12):2538-42.

26.

Recognition of patient referral desires in an academic managed care plan frequency, determinants, and outcomes.

Albertson GA, Lin CT, Kutner J, Schilling LM, Anderson SN, Anderson RJ.

J Gen Intern Med. 2000 Apr;15(4):242-7.

27.

N-3 and n-6 fatty acid metabolism in undifferentiated and differentiated human intestine cell line (Caco-2).

Huang YS, Liu JW, Koba K, Anderson SN.

Mol Cell Biochem. 1995 Oct 18;151(2):121-30.

PMID:
8569757
28.

Virucidal effect of murine duodenal extracts: studies with lactate dehydrogenase-elevating virus.

Broen JJ, DesJarlais SE, Duman RG, Anderson SN, Mueller RA, Cafruny WA.

Antiviral Res. 1992 Jun;18(3-4):327-40.

PMID:
1416911
29.
30.

The susceptibility of various cultured cells to induction of clear cytoplasmic vacuoles by disobutamide.

Ruben Z, Anderson SN, Fuller GC.

Toxicol In Vitro. 1990;4(4-5):497-505.

PMID:
20702220
31.

Cell-mediated contraction of collagen lattices in serum-free medium: effect of serum and nonserum factors.

Anderson SN, Ruben Z, Fuller GC.

In Vitro Cell Dev Biol. 1990 Jan;26(1):61-6.

PMID:
2307639
32.

Disobutamide: a model agent for investigating intracellular drug storage.

Ruben Z, Dodd DC, Rorig KJ, Anderson SN.

Toxicol Appl Pharmacol. 1989 Jan;97(1):57-71.

PMID:
2464862
33.

Structural determinants of cationic amphiphilic amines which induce clear cytoplasmic vacuoles in cultured cells.

Rorig KJ, Ruben Z, Anderson SN.

Proc Soc Exp Biol Med. 1987 Feb;184(2):165-71.

PMID:
3809171
34.

The pH dependence of disobutamide-induced clear cytoplasmic vacuoles in cultured cells.

Ruben Z, Anderson SN, Rorig KJ, Hribar JD, Bible RH Jr.

Proc Soc Exp Biol Med. 1985 Oct;180(1):84-91.

PMID:
4034538
35.

Development of an in vitro and in vivo epithelial tumor model for the study of invasion.

Pauli BU, Anderson SN, Memoli VA, Kuettner KE.

Cancer Res. 1980 Dec;40(12):4571-80.

36.

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