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Items: 9


tRNA functional signatures classify plastids as late-branching cyanobacteria.

Lawrence TJ, Amrine KC, Swingley WD, Ardell DH.

BMC Evol Biol. 2019 Dec 9;19(1):224. doi: 10.1186/s12862-019-1552-7.


Comparative transcriptomics of Central Asian Vitis vinifera accessions reveals distinct defense strategies against powdery mildew.

Amrine KC, Blanco-Ulate B, Riaz S, Pap D, Jones L, Figueroa-Balderas R, Walker MA, Cantu D.

Hortic Res. 2015 Aug 26;2:15037. doi: 10.1038/hortres.2015.37. eCollection 2015.


Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot.

Blanco-Ulate B, Amrine KC, Collins TS, Rivero RM, Vicente AR, Morales-Cruz A, Doyle CL, Ye Z, Allen G, Heymann H, Ebeler SE, Cantu D.

Plant Physiol. 2015 Dec;169(4):2422-43. doi: 10.1104/pp.15.00852. Epub 2015 Oct 8.


Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens.

Morales-Cruz A, Amrine KC, Blanco-Ulate B, Lawrence DP, Travadon R, Rolshausen PE, Baumgartner K, Cantu D.

BMC Genomics. 2015 Jun 19;16:469. doi: 10.1186/s12864-015-1624-z.


FAST: FAST Analysis of Sequences Toolbox.

Lawrence TJ, Kauffman KT, Amrine KC, Carper DL, Lee RS, Becich PJ, Canales CJ, Ardell DH.

Front Genet. 2015 May 19;6:172. doi: 10.3389/fgene.2015.00172. eCollection 2015.


Discovery of core biotic stress responsive genes in Arabidopsis by weighted gene co-expression network analysis.

Amrine KC, Blanco-Ulate B, Cantu D.

PLoS One. 2015 Mar 2;10(3):e0118731. doi: 10.1371/journal.pone.0118731. eCollection 2015.


Adaptive genomic structural variation in the grape powdery mildew pathogen, Erysiphe necator.

Jones L, Riaz S, Morales-Cruz A, Amrine KC, McGuire B, Gubler WD, Walker MA, Cantu D.

BMC Genomics. 2014 Dec 9;15:1081. doi: 10.1186/1471-2164-15-1081.


Genome-wide transcriptional profiling of Botrytis cinerea genes targeting plant cell walls during infections of different hosts.

Blanco-Ulate B, Morales-Cruz A, Amrine KC, Labavitch JM, Powell AL, Cantu D.

Front Plant Sci. 2014 Sep 3;5:435. doi: 10.3389/fpls.2014.00435. eCollection 2014.


tRNA signatures reveal a polyphyletic origin of SAR11 strains among alphaproteobacteria.

Amrine KC, Swingley WD, Ardell DH.

PLoS Comput Biol. 2014 Feb 27;10(2):e1003454. doi: 10.1371/journal.pcbi.1003454. eCollection 2014 Feb.

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